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LotjaGi1g1v0282200.2

Overview

Field Value
Gene ID LotjaGi1g1v0282200
Transcript ID LotjaGi1g1v0282200.2
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Receptor-like kinase; TAIR: AT4G18250.1 receptor Serine/Threonine kinase-like protein; Swiss-Prot: sp|P93604|LRK10_WHEAT Rust resistance kinase Lr10; TrEMBL-Plants: tr|G7I976|G7I976_MEDTR Stress-induced receptor-like kinase; Found in the gene: LotjaGi1g1v0282200
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:68847327..68848332) extracted from Lotus japonicus Gifu genome v1.2.

GTGCCTATAAGGTACTCTTACAAAGACATCAAGAGCATAACACAAAAATTTAAAACTAAACTAGGAAATGGAGGCTTTGG TTCTGTCTTCAAAGGACAATTACGAAGTGGTCGTCTTGTAGCTGTCAAGATGTTGGACAAAGCCAAGACAAATGGTCAAG ACTTCATCAATGAAGTTGCCACCATTGGTACCATTCATCATGTTAATGTTGTTCAGCTCATTGGTTATTGTGTGGAGGGA TCAAAGCGTGCTCTTATATATGAATTCATGCCAAATGGGTCTCTTGAAAAGTACATCTTTTCTCATGAAGAGAGTTCTTC TCTAAGTTGTGAGAAATTATATACCATTTCTCTTGGAGTGGCTCATGGCATTGAATACTTGCATAATGGCTGCAACTTGA AAATTCTGCACTTTGACATCAAGCCTCATAACATTCTTCTTGATGAGAATTTCAATCCAAAAGTTTCTGATTTTGGACTT GCAAGACTCTGTCCTACAGATAATAGCATTGTGTCTTTGACCGCAGCAAGAGGAACCATAGGATACATGGCACCAGAGCT ATATTACAGAAATGTTGGCAATGTGTCCTACAAAGCTGATGTGTATAGCTTTGGGATGTTACTTATGGAGATGGCTAGTA GAAGGAAGAACTTGAATGCATTGGCTGAGGAATCTAGCCAAATTTATTTCCCTTTTTGGGTTTATGATCGGTTATGTGAT GGAAGGGAAATCACAATTGAAAATGACACGGATGAGGAGATGAAATTGGCAAAGAAAATGATGATTGTGGCTTTGTGGTG TATACAGACAAAGCCTGGCGATCGTCCTCCAATGGATAAAGTGTTGGAGATGCTTGAAGATCATGAGGAATTACAAATGC CTAAAGAGCCTTATCTATATGCACAAGATTTACCAGCAGAGGATGCTAGAGATTATAGCAACTCAAGTCCATCATCCTCT GATGGAGTAGACACTAATGACAGCACATGATTTGTATATGAACTGA
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0282200.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGTTGGACAAAGCCAAGACAAATGGTCAAGACTTCATCAATGAAGTTGCCACCATTGGTACCATTCATCATGTTAATGT TGTTCAGCTCATTGGTTATTGTGTGGAGGGATCAAAGCGTGCTCTTATATATGAATTCATGCCAAATGGGTCTCTTGAAA AGTACATCTTTTCTCATGAAGAGAGTTCTTCTCTAAGTTGTGAGAAATTATATACCATTTCTCTTGGAGTGGCTCATGGC ATTGAATACTTGCATAATGGCTGCAACTTGAAAATTCTGCACTTTGACATCAAGCCTCATAACATTCTTCTTGATGAGAA TTTCAATCCAAAAGTTTCTGATTTTGGACTTGCAAGACTCTGTCCTACAGATAATAGCATTGTGTCTTTGACCGCAGCAA GAGGAACCATAGGATACATGGCACCAGAGCTATATTACAGAAATGTTGGCAATGTGTCCTACAAAGCTGATGTGTATAGC TTTGGGATGTTACTTATGGAGATGGCTAGTAGAAGGAAGAACTTGAATGCATTGGCTGAGGAATCTAGCCAAATTTATTT CCCTTTTTGGGTTTATGATCGGTTATGTGATGGAAGGGAAATCACAATTGAAAATGACACGGATGAGGAGATGAAATTGG CAAAGAAAATGATGATTGTGGCTTTGTGGTGTATACAGACAAAGCCTGGCGATCGTCCTCCAATGGATAAAGTGTTGGAG ATGCTTGAAGATCATGAGGAATTACAAATGCCTAAAGAGCCTTATCTATATGCACAAGATTTACCAGCAGAGGATGCTAG AGATTATAGCAACTCAAGTCCATCATCCTCTGATGGAGTAGACACTAATGACAGCACATGA
Download CDS Sequence

Protein sequence (LotjaGi1g1v0282200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MLDKAKTNGQDFINEVATIGTIHHVNVVQLIGYCVEGSKRALIYEFMPNGSLEKYIFSHEESSSLSCEKLYTISLGVAHG IEYLHNGCNLKILHFDIKPHNILLDENFNPKVSDFGLARLCPTDNSIVSLTAARGTIGYMAPELYYRNVGNVSYKADVYS FGMLLMEMASRRKNLNALAEESSQIYFPFWVYDRLCDGREITIENDTDEEMKLAKKMMIVALWCIQTKPGDRPPMDKVLE MLEDHEELQMPKEPYLYAQDLPAEDARDYSNSSPSSSDGVDTNDST
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR27009
1 277 277 1.1E-159 –
PANTHER
PTHR27009:SF103
1 277 277 1.1E-159 –
SMART
SM00220
1 242 242 1.3E-12
IPR000719
ProSiteProfiles
PS50011
1 248 248 33.488
IPR000719
Gene3D
G3DSA:3.30.200.20
1 47 47 2.0E-12 –
PIRSF
PIRSF000654
2 254 253 6.7E-35 –
Pfam
PF07714
6 242 237 3.3E-39
IPR001245
SUPERFAMILY
SSF56112
10 243 234 1.48E-62
IPR011009
Gene3D
G3DSA:1.10.510.10
48 258 211 1.3E-52 –
ProSitePatterns
PS00108
92 104 13 -
IPR008271
MobiDBLite
mobidb-lite
253 286 34 - –
MobiDBLite
mobidb-lite
266 286 21 - –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0282200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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