Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0283600 |
| Transcript ID | LotjaGi1g1v0283600.3 |
| Related isoforms 6 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Phosphomevalonate kinase; TAIR: AT1G31910.1 GHMP kinase family protein; Swiss-Prot: sp|Q9C6T1|PMK_ARATH Phosphomevalonate kinase, peroxisomal; TrEMBL-Plants: tr|A0A075EBV2|A0A075EBV2_ASTME Phosphomevalonate kinase 1; Found in the gene: LotjaGi1g1v0283600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:69069563..69075775) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCCGTGTAAGTTAATCACATTCATCACTTATAATTTCAATCAATTAACTGCAACTAACCCATGTTTACGCACTCACA TCACAGAGTTGCTTCTGCTCCTGGGAAGGTGTTGATGACAGGGGGTTACCTCATTCTGGAGCGACCCAATGCAGGCCTTG TCCTCAGTACAAGTGCTCGCTTCTACGCCATCATCAAACCCTTCCATCCTCAAATCAAACCTGATGCATGGGCATGGGTA CTTGAACCTCTCTACTCTTCTTATTCATCTTCTCCTACTTGTTGATATTTGATCTTTCATTGCTTGATTTCAGGGTTGGA CAGATGTCAAATTAACCTCCCCTCAGCTCTCCAGAGAAGCCTTGTACAAACTAGCTCTCAATAATCTCACCATCCAAAAT GTTTCCTCATGGCAAGTATTTTCCATTTCTCTAATTCAACCTCAAATCAATTGCATATTTATCCGTTTGGAAGAGCTTAT TTGAGCTTATATGATCGCATAAGCGCTTGTGTAAGTGTTTGGGAGAGCTTATGCAAACAGCTTATGGTAGGCCATAAGCT GTTTTGAGCTTATTTCCATAAGCTACTCATGATAGCTTATGAAAAAGAGCTTATGCTTATGTATAACTTATTTCAATTTA TTTCAATAAATTTTTAAAAATAGCTTATGAATAAGCGCATGACCATAAGCGCTTAATTAAGCTGTTTTCCCAAACGGGTA TGTGAAATCAACAATAGCTTATTGGAGGTGGCAGTGTACAAATTTTAGGGGGGGCTAATACAGTTTTTGAATGTTCCTAG TTCCGTCCCTGCATGTAATATTGAAATTGTGTATGTATTGGTGTAGTTAGGCTTACAGGGACTGGTATTGTTGTTTCAGT GAATCAAGGAATCCTTTTGTGGAATATGCAGTGCAGTATTCTGTGGCTGCAGCATATGCGACGTTTGACCAGAGTAAAAA GGACTTGTTACACAAACTACTTTTACAAGGTAACAATGCTATGTTTTTCGACCCTTTAATAAACGAACATGTAACGAGAG CTTCCAACATTCAATTTTTATAGCTGGGTTGGTCTTGTAGGTCTTGACATTACAATCTTGGGTTCCAATGATTTTTATTC ATACAGGAATGAGGTAATTTACTCCGTTTTTTGGTATGCTTTTCTACAATTCTTTGCTCTTGTTTTCCCCTCGTTAGCTT TTTTGGATGCCCTGCACTTTTCATATGGTATTTATTTATAACCTTCGATCAAGGCATTTATTCCTTGTTAAAGTTAAATA CTTCTGCAGATTGAGAAACGTGGACTCCCTTTGACACCAGAATCATTGGCCACTCTTCCACCCTTTGCTTTCATTTCCTT CAACACTGATGATGCTATTGAAGGAAGTTGTAAGCCTGAAGTAGCTAAAACTGGTTTGGGCTCATCTGCAGCAATGACAA CAGCTGTAGTTGCTGCTTTACTTCATTACCTTGGTGTCGTAGAGCTTTCCTCTACGAAAGATCACGGGAACAGAAAGGAC ATTGCAGATCTTGATCTGGTGCATAAAATAGCTCAAACTGCACATTGTGTTGCACAGGGGAAGGTAGGTAGTGGGTTTGA TGTTAGCTCAGCTGTGTATGGCAGTCATCGTTATGTGCGGTTTTCACCAGAAGTGATTTCTTCCGCTCAGGTCTGCACAC TTCATTCCTCTTATCATTTGGCTTGTGTGTCAATCTACAATATTACGATTCTTTCTGATTCAAGTCTGTCACATAATATA CAAAATAAAGAGATACATGACTTAACTTACTATGCAAGTGTTCTGAATGGAAATGGTGTAATGCATCCTCCCTGGTTTCT TTGAACCATGTTTAGCTTCCATCTTGAGATCAATATTATCTGTGAATTCTTGAAATACTCGTGAGAGATATGTCTGTATA TTATGTAAGTCACCCCTGTGCATGCATTTCAGTCTATTTCCTCAAACTTGTAAATTTGGTACAATGTTCCATCCATAGGT TTTTTTAGTTGGAGTAAAACAAACCCCAAGGTAACTAATTATTGATTTAGCCTCATAATTTTACCTGTTGTCGTTGACCA CATGCTGCTGGTTATCTCTTACATTAGTTGACCACATGCTGTTCTTGGAATTATTAGAATGTTCCAGAAACATCAATAAC TTAGTAGTCTTTGTTTTATTGGCTTTGTAGGTTGCAGCTCAAGTAGTGCCCTTGCCAGAAGTTATCACTGACATTCTAAA AGGAAACTGGGACCATGACAGGACCGAGTTCTCTTTACCACCTTTGATGACTCTTGTAAGCAACTTCAATTTTTGCAACT GTTGGGATATGTTCACATGTCTTGTAATTATGGCTATGGGCACTTACTTCCTCTCTGCCTCTCTTCCCTCAATATTTCGA AGGGATGGGTGGTGGGATGTACCTAATTCTATAGTTGTACTTGCAATTTCTATTCATAACCTTATTTTAACGGTTAAGAA AAAATGTGTTTTCTCCAGGCTTGTTAATAGCGCGCTATAGCGTAGCGCCCTAGGGGTTCACCGCTACTCCACTATTCACC GCTATTTGCGCTATTTGCCGCTATAGCGCCGCAATAGCGTTTTTTGGGCTTGCCGCTACACTACGCTATCCGCCATTAAC AACCCTGGTTTGCTCATGATTTAGGCTCTTCTCCTCTTACCATTTCTTAGGACTTTTCAAAATTTGTAGGCTTTTGTTCC ATGTAAGGCTTTTCGTATCCACAATCCACAGTTTGGACTCCCGGTTACCATGCCTTATGATGTCTAAGATCTTGCCTTTT ATTGAACTTTTTTATTGTTTAGCTTTAGACTTTTTTGGTTGAATACTTGGTTTGTTGTCCAGTATCCAGTGCAGTGCACT GCCAACTACTCAGCCTAATGTGATATTTACAATTCAGGTGGTGTATTCTTGATTATTACAATTGTGTGAAGGAAACAATT AATAACATCAATGGCAGAGGTTTTAGTTCCCAAGGATCAGGCTGTTTGTCTTGATTTAAAGAAAATTATCCATGTGACCA TGTGAGATTTGGAGGCTAAGAGCCATTGAAGGCTTATCTATTAGTTCCTTGTTTCTCTGTGTTGTTTTATATTATTGTGA TTTTCTATGATTAGTTTATTGTGAATTTGTGAGCAGCAAATGTAAACATTGAAGTGCATTTTAGTTAATGACTTAAGAGG CAGAAGCTTAATGCTTCTTGTGCCATAAATTCTTGAAATCAAGTTAATTAATCTAATTGTGCAAGTTACCAGTTTAACTT ACAGAAAGCTTGGTGCTTCAATTTTCCAATTATATTCTGATTCTGAGTAGTACAAAGGAGAGCCTTCGTGTAACGGTTAA AGTTGCTAGGCAAGGTAAGGCTGCCTAGTGCCTATAATAGACCCCCAATGAGTTCGACCCTGCCGTGGCCAGAGTTTATT AATATCATGTTCTCTGTTTTCAATATGGGTGAATAGCTCATAAGATTCACTTAAACAGTTACCAACTTTCAAAATCAAAG AAGTTGAACCATATGTTACAAGGTTGAATTTATGTCCACAACTACATATTCACGACAAACAGTTACCATCTTTTTTCATA TTAAAGGAAATGTATTAGTAGGTGTCCCAGGATCTCTTTCTTGCTCTGTATCCTGTTCTGGTTCAGCAACTGACTTGATA TGAATATCTATATTGAACAACTATGGTGTGGAAATTATTCCCATTTCTCTCTTACAAGCATCTCTCTCTCTCTCTCTCTC TCTCTCTCTCTCCTGTATCCCCTAAATTTCATTTTTCCAAATACTGTTTTAACTTGTTTGACATATGAACTCTCTTGGTT CCCTTATTGATGCCTTTATTTAGTTATTAGGAGAACCTGGAACTGGTGGATCATCCACACCATCAATGGTTGGTGCAGTC AAAAAATGGCAAAAGTCTGACCCTCAGAAATCCCTAGACACATGGAGAAGATTGTCAGAGGCGAATTCAGCATTGGAATT GCAGCTCAACTTGTTAAGCAAATTAGCAAAGGAGCAGTGGGATGCATACAAATCTGTGATTGACAGCTGCAGCATACTCA GATCAGATAAGGTATTTATTTGATATCATTTGTGGTTGTTTAATTCATTGAAGTTAGTCAAAAACTGAATATTTATTATT TTGTTACTAAAGTGTATTGATTCACAAAGCTCTCCATTGGCCTCAAATAACTTTGAACATTATATTTGGACGGTAATCCT TAAATTGGATTAGAGTTTGATACTTTTCTTCTCATGTCAGCTCTTCATTAAATAGGACGCCTATCTTGATTAGTATACTT CTCTTATTAGTTTTGATTGGTTTGAAAGACAGACATGCAGCAGTATGTCTGACTAGAGCTACCTTGGAAATGAGTAGAGA AGCTTATTTGCTGCCTGCAGGCGACCTTCACTCTCATTATAGGTTACTAGAATTTAAAATATTCTTGAGAGTCTGATTCT GGCTTGATGTAGTGTTATAAGTTACTTTAAATTTTAACACCCTTGATTGTTTTTGTACCTCTTGATTTCCTTCATGCTTT GATATGACCTTATTACCTGAGAGTTTTGAACCTTGTCACTCACAATAGATTCAAACCTGATGATTATGGAATGATGAACA TTTCCGGGGCCCAACTATAATTGATCAGTTTGGTAACCCTTAGAAATGGAGGCTGAACAATTCACTGATGGCATTTATGA AAAACTGTTTCAAAGTCACCAGTTAAATTTACGTCCCCATTTTTAAGGGCATACCCAGACTGACCTTTTAAGGGGAAAGA TTTGACGGGATCCTTTCATGTGGCATGGATATGAGGAGGAGCAAAAAAAAAGTTGTTTCTCCTACCTTGCTTCTCATGCC CAGAAATTGTATTTAATATTTTTGATTATAGGGAAGCGCCCAAGCTGTATAAATCTATGATTCAGTTAACTCCAAACGAA GTTCTGTAGCTATTGCAGGCCTGGGTTTCAGTTTCAGGCTGTAAACTTTTTAAGTACATGTGATGTTATTTTCTTGGGAC TGCTCTTTCTTGCTGTCAAGTTTTAATAATCTTTGATGTATTGTGACATTTCTCCAAGCTGTATAAATCTATGATTCAGT TAACTCCAAACGAAGTTCTGTAGCTATTGCAGGCCTGGGTTTCAGTTTCAGGCTGTAAACTTTTTAAGTACATGTGATGT TATTTTCTTGGGACTGCTCTTTCTTGCTGTCAAGTTTTAATAATCTTTGATGTATTGTGACATTTCTCCTTGCTGATCTT CTTTTGTGTTGATGCTTGGAATGCAAATTGCATAATCAGTGGATAGAACAAGCTTCTGAACCTGTAAAGGAAGCAGTTAT TAAAGCACTGCTGGGTGCAAGAGATGCCATGCTGGGAATTAGATATCATATGCGCCTGATGGGCGAGGCTTCAGGGGTTC CAGTAAGTTCATTTCACTGATTCAGCACCTATTTGTATAGTTCTTTGTTGGTATGATGTCGATATTGCCTATGAAAATGC ATGTCCAGTAGACTGTGTTACCCTTAAGAATTTTATTTTTGTTGAAATTTAGTGATTTTGCTTCATACGTTAACTCCTGG TGAGGTACTAATCTCTAATCTTCCTACCATAAAAGTATAATATAGAACCATCCGTGTGGCTTCCCCAAACAAGTTAAGCT TTTTGGATAGTTGGTTCATAATATACTATCAGTCTATCGGAGCTTCTATGGCTATATGGTCTAGAGTTAAGATACGAATT AAATTGTGTTTATGGAACTTAAATATGCTGTATTTAGTTAAGTGTAGTCTGGTTTGCTTTCCTGAGTGATCAATCATTTA AAAGTTTAACAATTTATGAGTTCAGCAGTCTCTTGACTTGTAAAGTATACAGATTGAACCTGAAACACAAACACAACTTC TGGATGCTACAATGAACTTGGAAGGAGTATTATTGGCTGGAGTTCCAGGGGCAGGAGGATATGATGCAGTCTTTGCTGTT ACTTTGGGAGATTCGAGCAGCAATGTGACTAAAGTATGGGGCTCACTGAATGTTCTTGCCATGTTGGTTAAAGAAGACCC TTGTGGTGTTTCTTTAGAAAGTGCTGACCCAAGAACCAATGAAATCACATCAGCAGTGTCTTCAATTCATATTGAATAGG CTCATCTCCATCAATTACATATTGTAATCTGTGGAATATAGCTTCTAGACTAG
CDS sequence (LotjaGi1g1v0283600.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCGTAGTTGCTTCTGCTCCTGGGAAGGTGTTGATGACAGGGGGTTACCTCATTCTGGAGCGACCCAATGCAGGCCT TGTCCTCAGTACAAGTGCTCGCTTCTACGCCATCATCAAACCCTTCCATCCTCAAATCAAACCTGATGCATGGGCATGGG GTTGGACAGATGTCAAATTAACCTCCCCTCAGCTCTCCAGAGAAGCCTTGTACAAACTAGCTCTCAATAATCTCACCATC CAAAATGTTTCCTCATGGCAAGCTTACAGGGACTGGTATTGTTGTTTCAGTGAATCAAGGAATCCTTTTGTGGAATATGC AGTGCAGTATTCTGTGGCTGCAGCATATGCGACGTTTGACCAGAGTAAAAAGGACTTGTTACACAAACTACTTTTACAAG GTCTTGACATTACAATCTTGGGTTCCAATGATTTTTATTCATACAGGAATGAGATTGAGAAACGTGGACTCCCTTTGACA CCAGAATCATTGGCCACTCTTCCACCCTTTGCTTTCATTTCCTTCAACACTGATGATGCTATTGAAGGAAGTTGTAAGCC TGAAGTAGCTAAAACTGGTTTGGGCTCATCTGCAGCAATGACAACAGCTGTAGTTGCTGCTTTACTTCATTACCTTGGTG TCGTAGAGCTTTCCTCTACGAAAGATCACGGGAACAGAAAGGACATTGCAGATCTTGATCTGGTGCATAAAATAGCTCAA ACTGCACATTGTGTTGCACAGGGGAAGGTAGGTAGTGGGTTTGATGTTAGCTCAGCTGTGTATGGCAGTCATCGTTATGT GCGGTTTTCACCAGAAGTGATTTCTTCCGCTCAGGTTGCAGCTCAAGTAGTGCCCTTGCCAGAAGTTATCACTGACATTC TAAAAGGAAACTGGGACCATGACAGGACCGAGTTCTCTTTACCACCTTTGATGACTCTTTTATTAGGAGAACCTGGAACT GGTGGATCATCCACACCATCAATGGTTGGTGCAGTCAAAAAATGGCAAAAGTCTGACCCTCAGAAATCCCTAGACACATG GAGAAGATTGTCAGAGGCGAATTCAGCATTGGAATTGCAGCTCAACTTGTTAAGCAAATTAGCAAAGGAGCAGTGGGATG CATACAAATCTGTGATTGACAGCTGCAGCATACTCAGATCAGATAAGTGGATAGAACAAGCTTCTGAACCTGTAAAGGAA GCAGTTATTAAAGCACTGCTGGGTGCAAGAGATGCCATGCTGGGAATTAGATATCATATGCGCCTGATGGGCGAGGCTTC AGGGGTTCCAATTGAACCTGAAACACAAACACAACTTCTGGATGCTACAATGAACTTGGAAGGAGTATTATTGGCTGGAG TTCCAGGGGCAGGAGGATATGATGCAGTCTTTGCTGTTACTTTGGGAGATTCGAGCAGCAATGTGACTAAAGTATGGGGC TCACTGAATGTTCTTGCCATGTTGGTTAAAGAAGACCCTTGTGGTGTTTCTTTAGAAAGTGCTGACCCAAGAACCAATGA AATCACATCAGCACTTCTAGACTAG
Protein sequence (LotjaGi1g1v0283600.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAVVASAPGKVLMTGGYLILERPNAGLVLSTSARFYAIIKPFHPQIKPDAWAWGWTDVKLTSPQLSREALYKLALNNLTI QNVSSWQAYRDWYCCFSESRNPFVEYAVQYSVAAAYATFDQSKKDLLHKLLLQGLDITILGSNDFYSYRNEIEKRGLPLT PESLATLPPFAFISFNTDDAIEGSCKPEVAKTGLGSSAAMTTAVVAALLHYLGVVELSSTKDHGNRKDIADLDLVHKIAQ TAHCVAQGKVGSGFDVSSAVYGSHRYVRFSPEVISSAQVAAQVVPLPEVITDILKGNWDHDRTEFSLPPLMTLLLGEPGT GGSSTPSMVGAVKKWQKSDPQKSLDTWRRLSEANSALELQLNLLSKLAKEQWDAYKSVIDSCSILRSDKWIEQASEPVKE AVIKALLGARDAMLGIRYHMRLMGEASGVPIEPETQTQLLDATMNLEGVLLAGVPGAGGYDAVFAVTLGDSSSNVTKVWG SLNVLAMLVKEDPCGVSLESADPRTNEITSALLD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 505 | 505 | 4.4E-206 | – | |
| PIRSF | 1 | 508 | 508 | 3.3E-199 | ||
| PANTHER | 1 | 505 | 505 | 4.4E-206 | ||
| SUPERFAMILY | 2 | 273 | 272 | 1.09E-21 | ||
| TIGRFAM | 4 | 505 | 502 | 2.8E-169 | ||
| Pfam | 185 | 263 | 79 | 1.2E-18 | ||
| Pfam | 416 | 471 | 56 | 7.6E-6 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Phosphomevalonate kinase activity | Catalysis of the reaction: (R)-5-phosphomevalonate + ATP = (R)-5-diphosphomevalonate + ADP + H(+). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
Expression pattern of LotjaGi1g1v0283600.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…