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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0283600 |
| Transcript ID | LotjaGi1g1v0283600.4 |
| Related isoforms 6 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Phosphomevalonate kinase; TAIR: AT1G31910.1 GHMP kinase family protein; Swiss-Prot: sp|Q9C6T1|PMK_ARATH Phosphomevalonate kinase, peroxisomal; TrEMBL-Plants: tr|A0A075EBV2|A0A075EBV2_ASTME Phosphomevalonate kinase 1; Found in the gene: LotjaGi1g1v0283600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:69069617..69075661) extracted from Lotus japonicus Gifu genome v1.2.
ATGACAGGGGGTTACCTCATTCTGGAGCGACCCAATGCAGGCCTTGTCCTCAGTACAAGTGCTCGCTTCTACGCCATCAT CAAACCCTTCCATCCTCAAATCAAACCTGATGCATGGGCATGGGTACTTGAACCTCTCTACTCTTCTTATTCATCTTCTC CTACTTGTTGATATTTGATCTTTCATTGCTTGATTTCAGGGTTGGACAGATGTCAAATTAACCTCCCCTCAGCTCTCCAG AGAAGCCTTGTACAAACTAGCTCTCAATAATCTCACCATCCAAAATGTTTCCTCATGGCAAGTATTTTCCATTTCTCTAA TTCAACCTCAAATCAATTGCATATTTATCCGTTTGGAAGAGCTTATTTGAGCTTATATGATCGCATAAGCGCTTGTGTAA GTGTTTGGGAGAGCTTATGCAAACAGCTTATGGTAGGCCATAAGCTGTTTTGAGCTTATTTCCATAAGCTACTCATGATA GCTTATGAAAAAGAGCTTATGCTTATGTATAACTTATTTCAATTTATTTCAATAAATTTTTAAAAATAGCTTATGAATAA GCGCATGACCATAAGCGCTTAATTAAGCTGTTTTCCCAAACGGGTATGTGAAATCAACAATAGCTTATTGGAGGTGGCAG TGTACAAATTTTAGGGGGGGCTAATACAGTTTTTGAATGTTCCTAGTTCCGTCCCTGCATGTAATATTGAAATTGTGTAT GTATTGGTGTAGTTAGGCTTACAGGGACTGGTATTGTTGTTTCAGTGAATCAAGGAATCCTTTTGTGGAATATGCAGTGC AGTATTCTGTGGCTGCAGCATATGCGACGTTTGACCAGAGTAAAAAGGACTTGTTACACAAACTACTTTTACAAGGTAAC AATGCTATGTTTTTCGACCCTTTAATAAACGAACATGTAACGAGAGCTTCCAACATTCAATTTTTATAGCTGGGTTGGTC TTGTAGGTCTTGACATTACAATCTTGGGTTCCAATGATTTTTATTCATACAGGAATGAGGTAATTTACTCCGTTTTTTGG TATGCTTTTCTACAATTCTTTGCTCTTGTTTTCCCCTCGTTAGCTTTTTTGGATGCCCTGCACTTTTCATATGGTATTTA TTTATAACCTTCGATCAAGGCATTTATTCCTTGTTAAAGTTAAATACTTCTGCAGATTGAGAAACGTGGACTCCCTTTGA CACCAGAATCATTGGCCACTCTTCCACCCTTTGCTTTCATTTCCTTCAACACTGATGATGCTATTGAAGGAAGTTGTAAG CCTGAAGTAGCTAAAACTGGTTTGGGCTCATCTGCAGCAATGACAACAGCTGTAGTTGCTGCTTTACTTCATTACCTTGG TGTCGTAGAGCTTTCCTCTACGAAAGATCACGGGAACAGAAAGGACATTGCAGATCTTGATCTGGTGCATAAAATAGCTC AAACTGCACATTGTGTTGCACAGGGGAAGGTAGGTAGTGGGTTTGATGTTAGCTCAGCTGTGTATGGCAGTCATCGTTAT GTGCGGTTTTCACCAGAAGTGATTTCTTCCGCTCAGGTCTGCACACTTCATTCCTCTTATCATTTGGCTTGTGTGTCAAT CTACAATATTACGATTCTTTCTGATTCAAGTCTGTCACATAATATACAAAATAAAGAGATACATGACTTAACTTACTATG CAAGTGTTCTGAATGGAAATGGTGTAATGCATCCTCCCTGGTTTCTTTGAACCATGTTTAGCTTCCATCTTGAGATCAAT ATTATCTGTGAATTCTTGAAATACTCGTGAGAGATATGTCTGTATATTATGTAAGTCACCCCTGTGCATGCATTTCAGTC TATTTCCTCAAACTTGTAAATTTGGTACAATGTTCCATCCATAGGTTTTTTTAGTTGGAGTAAAACAAACCCCAAGGTAA CTAATTATTGATTTAGCCTCATAATTTTACCTGTTGTCGTTGACCACATGCTGCTGGTTATCTCTTACATTAGTTGACCA CATGCTGTTCTTGGAATTATTAGAATGTTCCAGAAACATCAATAACTTAGTAGTCTTTGTTTTATTGGCTTTGTAGGTTG CAGCTCAAGTAGTGCCCTTGCCAGAAGTTATCACTGACATTCTAAAAGGAAACTGGGACCATGACAGGACCGAGTTCTCT TTACCACCTTTGATGACTCTTGTAAGCAACTTCAATTTTTGCAACTGTTGGGATATGTTCACATGTCTTGTAATTATGGC TATGGGCACTTACTTCCTCTCTGCCTCTCTTCCCTCAATATTTCGAAGGGATGGGTGGTGGGATGTACCTAATTCTATAG TTGTACTTGCAATTTCTATTCATAACCTTATTTTAACGGTTAAGAAAAAATGTGTTTTCTCCAGGCTTGTTAATAGCGCG CTATAGCGTAGCGCCCTAGGGGTTCACCGCTACTCCACTATTCACCGCTATTTGCGCTATTTGCCGCTATAGCGCCGCAA TAGCGTTTTTTGGGCTTGCCGCTACACTACGCTATCCGCCATTAACAACCCTGGTTTGCTCATGATTTAGGCTCTTCTCC TCTTACCATTTCTTAGGACTTTTCAAAATTTGTAGGCTTTTGTTCCATGTAAGGCTTTTCGTATCCACAATCCACAGTTT GGACTCCCGGTTACCATGCCTTATGATGTCTAAGATCTTGCCTTTTATTGAACTTTTTTATTGTTTAGCTTTAGACTTTT TTGGTTGAATACTTGGTTTGTTGTCCAGTATCCAGTGCAGTGCACTGCCAACTACTCAGCCTAATGTGATATTTACAATT CAGGTGGTGTATTCTTGATTATTACAATTGTGTGAAGGAAACAATTAATAACATCAATGGCAGAGGTTTTAGTTCCCAAG GATCAGGCTGTTTGTCTTGATTTAAAGAAAATTATCCATGTGACCATGTGAGATTTGGAGGCTAAGAGCCATTGAAGGCT TATCTATTAGTTCCTTGTTTCTCTGTGTTGTTTTATATTATTGTGATTTTCTATGATTAGTTTATTGTGAATTTGTGAGC AGCAAATGTAAACATTGAAGTGCATTTTAGTTAATGACTTAAGAGGCAGAAGCTTAATGCTTCTTGTGCCATAAATTCTT GAAATCAAGTTAATTAATCTAATTGTGCAAGTTACCAGTTTAACTTACAGAAAGCTTGGTGCTTCAATTTTCCAATTATA TTCTGATTCTGAGTAGTACAAAGGAGAGCCTTCGTGTAACGGTTAAAGTTGCTAGGCAAGGTAAGGCTGCCTAGTGCCTA TAATAGACCCCCAATGAGTTCGACCCTGCCGTGGCCAGAGTTTATTAATATCATGTTCTCTGTTTTCAATATGGGTGAAT AGCTCATAAGATTCACTTAAACAGTTACCAACTTTCAAAATCAAAGAAGTTGAACCATATGTTACAAGGTTGAATTTATG TCCACAACTACATATTCACGACAAACAGTTACCATCTTTTTTCATATTAAAGGAAATGTATTAGTAGGTGTCCCAGGATC TCTTTCTTGCTCTGTATCCTGTTCTGGTTCAGCAACTGACTTGATATGAATATCTATATTGAACAACTATGGTGTGGAAA TTATTCCCATTTCTCTCTTACAAGCATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTGTATCCCCTAAATTTCATTT TTCCAAATACTGTTTTAACTTGTTTGACATATGAACTCTCTTGGTTCCCTTATTGATGCCTTTATTTAGTTATTAGGAGA ACCTGGAACTGGTGGATCATCCACACCATCAATGGTTGGTGCAGTCAAAAAATGGCAAAAGTCTGACCCTCAGAAATCCC TAGACACATGGAGAAGATTGTCAGAGGCGAATTCAGCATTGGAATTGCAGCTCAACTTGTTAAGCAAATTAGCAAAGGAG CAGTGGGATGCATACAAATCTGTGATTGACAGCTGCAGCATACTCAGATCAGATAAGGTATTTATTTGATATCATTTGTG GTTGTTTAATTCATTGAAGTTAGTCAAAAACTGAATATTTATTATTTTGTTACTAAAGTGTATTGATTCACAAAGCTCTC CATTGGCCTCAAATAACTTTGAACATTATATTTGGACGGTAATCCTTAAATTGGATTAGAGTTTGATACTTTTCTTCTCA TGTCAGCTCTTCATTAAATAGGACGCCTATCTTGATTAGTATACTTCTCTTATTAGTTTTGATTGGTTTGAAAGACAGAC ATGCAGCAGTATGTCTGACTAGAGCTACCTTGGAAATGAGTAGAGAAGCTTATTTGCTGCCTGCAGGCGACCTTCACTCT CATTATAGGTTACTAGAATTTAAAATATTCTTGAGAGTCTGATTCTGGCTTGATGTAGTGTTATAAGTTACTTTAAATTT TAACACCCTTGATTGTTTTTGTACCTCTTGATTTCCTTCATGCTTTGATATGACCTTATTACCTGAGAGTTTTGAACCTT GTCACTCACAATAGATTCAAACCTGATGATTATGGAATGATGAACATTTCCGGGGCCCAACTATAATTGATCAGTTTGGT AACCCTTAGAAATGGAGGCTGAACAATTCACTGATGGCATTTATGAAAAACTGTTTCAAAGTCACCAGTTAAATTTACGT CCCCATTTTTAAGGGCATACCCAGACTGACCTTTTAAGGGGAAAGATTTGACGGGATCCTTTCATGTGGCATGGATATGA GGAGGAGCAAAAAAAAAGTTGTTTCTCCTACCTTGCTTCTCATGCCCAGAAATTGTATTTAATATTTTTGATTATAGGGA AGCGCCCAAGCTGTATAAATCTATGATTCAGTTAACTCCAAACGAAGTTCTGTAGCTATTGCAGGCCTGGGTTTCAGTTT CAGGCTGTAAACTTTTTAAGTACATGTGATGTTATTTTCTTGGGACTGCTCTTTCTTGCTGTCAAGTTTTAATAATCTTT GATGTATTGTGACATTTCTCCAAGCTGTATAAATCTATGATTCAGTTAACTCCAAACGAAGTTCTGTAGCTATTGCAGGC CTGGGTTTCAGTTTCAGGCTGTAAACTTTTTAAGTACATGTGATGTTATTTTCTTGGGACTGCTCTTTCTTGCTGTCAAG TTTTAATAATCTTTGATGTATTGTGACATTTCTCCTTGCTGATCTTCTTTTGTGTTGATGCTTGGAATGCAAATTGCATA ATCAGTGGATAGAACAAGCTTCTGAACCTGTAAAGGAAGCAGTTATTAAAGCACTGCTGGGTGCAAGAGATGCCATGCTG GGAATTAGATATCATATGCGCCTGATGGGCGAGGCTTCAGGGGTTCCAGTAAGTTCATTTCACTGATTCAGCACCTATTT GTATAGTTCTTTGTTGGTATGATGTCGATATTGCCTATGAAAATGCATGTCCAGTAGACTGTGTTACCCTTAAGAATTTT ATTTTTGTTGAAATTTAGTGATTTTGCTTCATACGTTAACTCCTGGTGAGGTACTAATCTCTAATCTTCCTACCATAAAA GTATAATATAGAACCATCCGTGTGGCTTCCCCAAACAAGTTAAGCTTTTTGGATAGTTGGTTCATAATATACTATCAGTC TATCGGAGCTTCTATGGCTATATGGTCTAGAGTTAAGATACGAATTAAATTGTGTTTATGGAACTTAAATATGCTGTATT TAGTTAAGTGTAGTCTGGTTTGCTTTCCTGAGTGATCAATCATTTAAAAGTTTAACAATTTATGAGTTCAGCAGTCTCTT GACTTGTAAAGTATACAGATTGAACCTGAAACACAAACACAACTTCTGGATGCTACAATGAACTTGGAAGGAGTATTATT GGCTGGAGTTCCAGGGGCAGGAGGATATGATGCAGTCTTTGCTGTTACTTTGGGAGATTCGAGCAGCAATGTGACTAAAG TATGGGGCTCACTGAATGTTCTTGCCATGTTGGTTAAAGAAGACCCTTGTGGTGTTTCTTTAGAAAGTGCTGACCCAAGA ACCAATGAAATCACATCAGCAGTGTCTTCAATTCATATTGAATAG
CDS sequence (LotjaGi1g1v0283600.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACAGGGGGTTACCTCATTCTGGAGCGACCCAATGCAGGCCTTGTCCTCAGTACAAGTGCTCGCTTCTACGCCATCAT CAAACCCTTCCATCCTCAAATCAAACCTGATGCATGGGCATGGGGTTGGACAGATGTCAAATTAACCTCCCCTCAGCTCT CCAGAGAAGCCTTGTACAAACTAGCTCTCAATAATCTCACCATCCAAAATGTTTCCTCATGTGAATCAAGGAATCCTTTT GTGGAATATGCAGTGCAGTATTCTGTGGCTGCAGCATATGCGACGTTTGACCAGAGTAAAAAGGACTTGTTACACAAACT ACTTTTACAAGGTCTTGACATTACAATCTTGGGTTCCAATGATTTTTATTCATACAGGAATGAGATTGAGAAACGTGGAC TCCCTTTGACACCAGAATCATTGGCCACTCTTCCACCCTTTGCTTTCATTTCCTTCAACACTGATGATGCTATTGAAGGA AGTTGTAAGCCTGAAGTAGCTAAAACTGGTTTGGGCTCATCTGCAGCAATGACAACAGCTGTAGTTGCTGCTTTACTTCA TTACCTTGGTGTCGTAGAGCTTTCCTCTACGAAAGATCACGGGAACAGAAAGGACATTGCAGATCTTGATCTGGTGCATA AAATAGCTCAAACTGCACATTGTGTTGCACAGGGGAAGGTAGGTAGTGGGTTTGATGTTAGCTCAGCTGTGTATGGCAGT CATCGTTATGTGCGGTTTTCACCAGAAGTGATTTCTTCCGCTCAGGTTGCAGCTCAAGTAGTGCCCTTGCCAGAAGTTAT CACTGACATTCTAAAAGGAAACTGGGACCATGACAGGACCGAGTTCTCTTTACCACCTTTGATGACTCTTTTATTAGGAG AACCTGGAACTGGTGGATCATCCACACCATCAATGGTTGGTGCAGTCAAAAAATGGCAAAAGTCTGACCCTCAGAAATCC CTAGACACATGGAGAAGATTGTCAGAGGCGAATTCAGCATTGGAATTGCAGCTCAACTTGTTAAGCAAATTAGCAAAGGA GCAGTGGGATGCATACAAATCTGTGATTGACAGCTGCAGCATACTCAGATCAGATAAGTGGATAGAACAAGCTTCTGAAC CTGTAAAGGAAGCAGTTATTAAAGCACTGCTGGGTGCAAGAGATGCCATGCTGGGAATTAGATATCATATGCGCCTGATG GGCGAGGCTTCAGGGGTTCCAATTGAACCTGAAACACAAACACAACTTCTGGATGCTACAATGAACTTGGAAGGAGTATT ATTGGCTGGAGTTCCAGGGGCAGGAGGATATGATGCAGTCTTTGCTGTTACTTTGGGAGATTCGAGCAGCAATGTGACTA AAGTATGGGGCTCACTGAATGTTCTTGCCATGTTGGTTAAAGAAGACCCTTGTGGTGTTTCTTTAGAAAGTGCTGACCCA AGAACCAATGAAATCACATCAGCAGTGTCTTCAATTCATATTGAATAG
Protein sequence (LotjaGi1g1v0283600.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTGGYLILERPNAGLVLSTSARFYAIIKPFHPQIKPDAWAWGWTDVKLTSPQLSREALYKLALNNLTIQNVSSCESRNPF VEYAVQYSVAAAYATFDQSKKDLLHKLLLQGLDITILGSNDFYSYRNEIEKRGLPLTPESLATLPPFAFISFNTDDAIEG SCKPEVAKTGLGSSAAMTTAVVAALLHYLGVVELSSTKDHGNRKDIADLDLVHKIAQTAHCVAQGKVGSGFDVSSAVYGS HRYVRFSPEVISSAQVAAQVVPLPEVITDILKGNWDHDRTEFSLPPLMTLLLGEPGTGGSSTPSMVGAVKKWQKSDPQKS LDTWRRLSEANSALELQLNLLSKLAKEQWDAYKSVIDSCSILRSDKWIEQASEPVKEAVIKALLGARDAMLGIRYHMRLM GEASGVPIEPETQTQLLDATMNLEGVLLAGVPGAGGYDAVFAVTLGDSSSNVTKVWGSLNVLAMLVKEDPCGVSLESADP RTNEITSAVSSIHIE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 482 | 482 | 3.1E-200 | – | |
| TIGRFAM | 1 | 482 | 482 | 8.6E-167 | ||
| PIRSF | 1 | 485 | 485 | 4.2E-195 | ||
| PANTHER | 1 | 482 | 482 | 3.1E-200 | ||
| SUPERFAMILY | 70 | 250 | 181 | 2.05E-17 | ||
| Pfam | 162 | 240 | 79 | 1.2E-18 | ||
| Pfam | 393 | 449 | 57 | 7.2E-6 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Phosphomevalonate kinase activity | Catalysis of the reaction: (R)-5-phosphomevalonate + ATP = (R)-5-diphosphomevalonate + ADP + H(+). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
Expression pattern of LotjaGi1g1v0283600.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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