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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0283600 |
| Transcript ID | LotjaGi1g1v0283600.5 |
| Related isoforms 6 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Phosphomevalonate kinase; TAIR: AT1G31910.1 GHMP kinase family protein; Swiss-Prot: sp|Q9C6T1|PMK_ARATH Phosphomevalonate kinase, peroxisomal; TrEMBL-Plants: tr|A0A075EBV2|A0A075EBV2_ASTME Phosphomevalonate kinase 1; Found in the gene: LotjaGi1g1v0283600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:69069617..69075775) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCCGTGTAAGTTAATCACATTCATCACTTATAATTTCAATCAATTAACTGCAACTAACCCATGTTTACGCACTCACA TCACAGAGTTGCTTCTGCTCCTGGGAAGGTGTTGATGACAGGGGGTTACCTCATTCTGGAGCGACCCAATGCAGGCCTTG TCCTCAGTACAAGTGCTCGCTTCTACGCCATCATCAAACCCTTCCATCCTCAAATCAAACCTGATGCATGGGCATGGGTA CTTGAACCTCTCTACTCTTCTTATTCATCTTCTCCTACTTGTTGATATTTGATCTTTCATTGCTTGATTTCAGGGTTGGA CAGATGTCAAATTAACCTCCCCTCAGCTCTCCAGAGAAGCCTTGTACAAACTAGCTCTCAATAATCTCACCATCCAAAAT GTTTCCTCATGGCAAGTATTTTCCATTTCTCTAATTCAACCTCAAATCAATTGCATATTTATCCGTTTGGAAGAGCTTAT TTGAGCTTATATGATCGCATAAGCGCTTGTGTAAGTGTTTGGGAGAGCTTATGCAAACAGCTTATGGTAGGCCATAAGCT GTTTTGAGCTTATTTCCATAAGCTACTCATGATAGCTTATGAAAAAGAGCTTATGCTTATGTATAACTTATTTCAATTTA TTTCAATAAATTTTTAAAAATAGCTTATGAATAAGCGCATGACCATAAGCGCTTAATTAAGCTGTTTTCCCAAACGGGTA TGTGAAATCAACAATAGCTTATTGGAGGTGGCAGTGTACAAATTTTAGGGGGGGCTAATACAGTTTTTGAATGTTCCTAG TTCCGTCCCTGCATGTAATATTGAAATTGTGTATGTATTGGTGTAGTTAGGCTTACAGGGACTGGTATTGTTGTTTCAGT GAATCAAGGAATCCTTTTGTGGAATATGCAGTGCAGTATTCTGTGGCTGCAGCATATGCGACGTTTGACCAGAGTAAAAA GGACTTGTTACACAAACTACTTTTACAAGGTAACAATGCTATGTTTTTCGACCCTTTAATAAACGAACATGTAACGAGAG CTTCCAACATTCAATTTTTATAGCTGGGTTGGTCTTGTAGGTCTTGACATTACAATCTTGGGTTCCAATGATTTTTATTC ATACAGGAATGAGGTAATTTACTCCGTTTTTTGGTATGCTTTTCTACAATTCTTTGCTCTTGTTTTCCCCTCGTTAGCTT TTTTGGATGCCCTGCACTTTTCATATGGTATTTATTTATAACCTTCGATCAAGGCATTTATTCCTTGTTAAAGTTAAATA CTTCTGCAGATTGAGAAACGTGGACTCCCTTTGACACCAGAATCATTGGCCACTCTTCCACCCTTTGCTTTCATTTCCTT CAACACTGATGATGCTATTGAAGGAAGTTGTAAGCCTGAAGTAGCTAAAACTGGTTTGGGCTCATCTGCAGCAATGACAA CAGCTGTAGTTGCTGCTTTACTTCATTACCTTGGTGTCGTAGAGCTTTCCTCTACGAAAGATCACGGGAACAGAAAGGAC ATTGCAGATCTTGATCTGGTGCATAAAATAGCTCAAACTGCACATTGTGTTGCACAGGGGAAGGTAGGTAGTGGGTTTGA TGTTAGCTCAGCTGTGTATGGCAGTCATCGTTATGTGCGGTTTTCACCAGAAGTGATTTCTTCCGCTCAGGTCTGCACAC TTCATTCCTCTTATCATTTGGCTTGTGTGTCAATCTACAATATTACGATTCTTTCTGATTCAAGTCTGTCACATAATATA CAAAATAAAGAGATACATGACTTAACTTACTATGCAAGTGTTCTGAATGGAAATGGTGTAATGCATCCTCCCTGGTTTCT TTGAACCATGTTTAGCTTCCATCTTGAGATCAATATTATCTGTGAATTCTTGAAATACTCGTGAGAGATATGTCTGTATA TTATGTAAGTCACCCCTGTGCATGCATTTCAGTCTATTTCCTCAAACTTGTAAATTTGGTACAATGTTCCATCCATAGGT TTTTTTAGTTGGAGTAAAACAAACCCCAAGGTAACTAATTATTGATTTAGCCTCATAATTTTACCTGTTGTCGTTGACCA CATGCTGCTGGTTATCTCTTACATTAGTTGACCACATGCTGTTCTTGGAATTATTAGAATGTTCCAGAAACATCAATAAC TTAGTAGTCTTTGTTTTATTGGCTTTGTAGGTTGCAGCTCAAGTAGTGCCCTTGCCAGAAGTTATCACTGACATTCTAAA AGGAAACTGGGACCATGACAGGACCGAGTTCTCTTTACCACCTTTGATGACTCTTGTAAGCAACTTCAATTTTTGCAACT GTTGGGATATGTTCACATGTCTTGTAATTATGGCTATGGGCACTTACTTCCTCTCTGCCTCTCTTCCCTCAATATTTCGA AGGGATGGGTGGTGGGATGTACCTAATTCTATAGTTGTACTTGCAATTTCTATTCATAACCTTATTTTAACGGTTAAGAA AAAATGTGTTTTCTCCAGGCTTGTTAATAGCGCGCTATAGCGTAGCGCCCTAGGGGTTCACCGCTACTCCACTATTCACC GCTATTTGCGCTATTTGCCGCTATAGCGCCGCAATAGCGTTTTTTGGGCTTGCCGCTACACTACGCTATCCGCCATTAAC AACCCTGGTTTGCTCATGATTTAGGCTCTTCTCCTCTTACCATTTCTTAGGACTTTTCAAAATTTGTAGGCTTTTGTTCC ATGTAAGGCTTTTCGTATCCACAATCCACAGTTTGGACTCCCGGTTACCATGCCTTATGATGTCTAAGATCTTGCCTTTT ATTGAACTTTTTTATTGTTTAGCTTTAGACTTTTTTGGTTGAATACTTGGTTTGTTGTCCAGTATCCAGTGCAGTGCACT GCCAACTACTCAGCCTAATGTGATATTTACAATTCAGGTGGTGTATTCTTGATTATTACAATTGTGTGAAGGAAACAATT AATAACATCAATGGCAGAGGTTTTAGTTCCCAAGGATCAGGCTGTTTGTCTTGATTTAAAGAAAATTATCCATGTGACCA TGTGAGATTTGGAGGCTAAGAGCCATTGAAGGCTTATCTATTAGTTCCTTGTTTCTCTGTGTTGTTTTATATTATTGTGA TTTTCTATGATTAGTTTATTGTGAATTTGTGAGCAGCAAATGTAAACATTGAAGTGCATTTTAGTTAATGACTTAAGAGG CAGAAGCTTAATGCTTCTTGTGCCATAAATTCTTGAAATCAAGTTAATTAATCTAATTGTGCAAGTTACCAGTTTAACTT ACAGAAAGCTTGGTGCTTCAATTTTCCAATTATATTCTGATTCTGAGTAGTACAAAGGAGAGCCTTCGTGTAACGGTTAA AGTTGCTAGGCAAGGTAAGGCTGCCTAGTGCCTATAATAGACCCCCAATGAGTTCGACCCTGCCGTGGCCAGAGTTTATT AATATCATGTTCTCTGTTTTCAATATGGGTGAATAGCTCATAAGATTCACTTAAACAGTTACCAACTTTCAAAATCAAAG AAGTTGAACCATATGTTACAAGGTTGAATTTATGTCCACAACTACATATTCACGACAAACAGTTACCATCTTTTTTCATA TTAAAGGAAATGTATTAGTAGGTGTCCCAGGATCTCTTTCTTGCTCTGTATCCTGTTCTGGTTCAGCAACTGACTTGATA TGAATATCTATATTGAACAACTATGGTGTGGAAATTATTCCCATTTCTCTCTTACAAGCATCTCTCTCTCTCTCTCTCTC TCTCTCTCTCTCCTGTATCCCCTAAATTTCATTTTTCCAAATACTGTTTTAACTTGTTTGACATATGAACTCTCTTGGTT CCCTTATTGATGCCTTTATTTAGTTATTAGGAGAACCTGGAACTGGTGGATCATCCACACCATCAATGGTTGGTGCAGTC AAAAAATGGCAAAAGTCTGACCCTCAGAAATCCCTAGACACATGGAGAAGATTGTCAGAGGCGAATTCAGCATTGGAATT GCAGCTCAACTTGTTAAGCAAATTAGCAAAGGAGCAGTGGGATGCATACAAATCTGTGATTGACAGCTGCAGCATACTCA GATCAGATAAGGTATTTATTTGATATCATTTGTGGTTGTTTAATTCATTGAAGTTAGTCAAAAACTGAATATTTATTATT TTGTTACTAAAGTGTATTGATTCACAAAGCTCTCCATTGGCCTCAAATAACTTTGAACATTATATTTGGACGGTAATCCT TAAATTGGATTAGAGTTTGATACTTTTCTTCTCATGTCAGCTCTTCATTAAATAGGACGCCTATCTTGATTAGTATACTT CTCTTATTAGTTTTGATTGGTTTGAAAGACAGACATGCAGCAGTATGTCTGACTAGAGCTACCTTGGAAATGAGTAGAGA AGCTTATTTGCTGCCTGCAGGCGACCTTCACTCTCATTATAGGTTACTAGAATTTAAAATATTCTTGAGAGTCTGATTCT GGCTTGATGTAGTGTTATAAGTTACTTTAAATTTTAACACCCTTGATTGTTTTTGTACCTCTTGATTTCCTTCATGCTTT GATATGACCTTATTACCTGAGAGTTTTGAACCTTGTCACTCACAATAGATTCAAACCTGATGATTATGGAATGATGAACA TTTCCGGGGCCCAACTATAATTGATCAGTTTGGTAACCCTTAGAAATGGAGGCTGAACAATTCACTGATGGCATTTATGA AAAACTGTTTCAAAGTCACCAGTTAAATTTACGTCCCCATTTTTAAGGGCATACCCAGACTGACCTTTTAAGGGGAAAGA TTTGACGGGATCCTTTCATGTGGCATGGATATGAGGAGGAGCAAAAAAAAAGTTGTTTCTCCTACCTTGCTTCTCATGCC CAGAAATTGTATTTAATATTTTTGATTATAGGGAAGCGCCCAAGCTGTATAAATCTATGATTCAGTTAACTCCAAACGAA GTTCTGTAGCTATTGCAGGCCTGGGTTTCAGTTTCAGGCTGTAAACTTTTTAAGTACATGTGATGTTATTTTCTTGGGAC TGCTCTTTCTTGCTGTCAAGTTTTAATAATCTTTGATGTATTGTGACATTTCTCCAAGCTGTATAAATCTATGATTCAGT TAACTCCAAACGAAGTTCTGTAGCTATTGCAGGCCTGGGTTTCAGTTTCAGGCTGTAAACTTTTTAAGTACATGTGATGT TATTTTCTTGGGACTGCTCTTTCTTGCTGTCAAGTTTTAATAATCTTTGATGTATTGTGACATTTCTCCTTGCTGATCTT CTTTTGTGTTGATGCTTGGAATGCAAATTGCATAATCAGTGGATAGAACAAGCTTCTGAACCTGTAAAGGAAGCAGTTAT TAAAGCACTGCTGGGTGCAAGAGATGCCATGCTGGGAATTAGATATCATATGCGCCTGATGGGCGAGGCTTCAGGGGTTC CAGTAAGTTCATTTCACTGATTCAGCACCTATTTGTATAGTTCTTTGTTGGTATGATGTCGATATTGCCTATGAAAATGC ATGTCCAGTAGACTGTGTTACCCTTAAGAATTTTATTTTTGTTGAAATTTAGTGATTTTGCTTCATACGTTAACTCCTGG TGAGGTACTAATCTCTAATCTTCCTACCATAAAAGTATAATATAGAACCATCCGTGTGGCTTCCCCAAACAAGTTAAGCT TTTTGGATAGTTGGTTCATAATATACTATCAGTCTATCGGAGCTTCTATGGCTATATGGTCTAGAGTTAAGATACGAATT AAATTGTGTTTATGGAACTTAAATATGCTGTATTTAGTTAAGTGTAGTCTGGTTTGCTTTCCTGAGTGATCAATCATTTA AAAGTTTAACAATTTATGAGTTCAGCAGTCTCTTGACTTGTAAAGTATACAGATTGAACCTGAAACACAAACACAACTTC TGGATGCTACAATGAACTTGGAAGGAGTATTATTGGCTGGAGTTCCAGGGGCAGGAGGATATGATGCAGTCTTTGCTGTT ACTTTGGGAGATTCGAGCAGCAATGTGACTAAAGTATGGGGCTCACTGAATGTTCTTGCCATGTTGGTTAAAGAAGACCC TTGTGGTGTTTCTTTAGAAAGTGCTGACCCAAGAACCAATGAAATCACATCAGCAGTGTCTTCAATTCATATTGAATAG
CDS sequence (LotjaGi1g1v0283600.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAGGCCTTGTCCTCAGTACAAGTGCTCGCTTCTACGCCATCATCAAACCCTTCCATCCTCAAATCAAACCTGATGCA TGGGCATGGTGAATCAAGGAATCCTTTTGTGGAATATGCAGTGCAGTATTCTGTGGCTGCAGCATATGCGACGTTTGACC AGAGTAAAAAGGACTTGTTACACAAACTACTTTTACAAGGTCTTGACATTACAATCTTGGGTTCCAATGATTTTTATTCA TACAGGAATGAGATTGAGAAACGTGGACTCCCTTTGACACCAGAATCATTGGCCACTCTTCCACCCTTTGCTTTCATTTC CTTCAACACTGATGATGCTATTGAAGGAAGTTGTAAGCCTGAAGTAGCTAAAACTGGTTTGGGCTCATCTGCAGCAATGA CAACAGCTGTAGTTGCTGCTTTACTTCATTACCTTGGTGTCGTAGAGCTTTCCTCTACGAAAGATCACGGGAACAGAAAG GACATTGCAGATCTTGATCTGGTGCATAAAATAGCTCAAACTGCACATTGTGTTGCACAGGGGAAGGTAGGTAGTGGGTT TGATGTTAGCTCAGCTGTGTATGGCAGTCATCGTTATGTGCGGTTTTCACCAGAAGTGATTTCTTCCGCTCAGGTTGCAG CTCAAGTAGTGCCCTTGCCAGAAGTTATCACTGACATTCTAAAAGGAAACTGGGACCATGACAGGACCGAGTTCTCTTTA CCACCTTTGATGACTCTTTTATTAGGAGAACCTGGAACTGGTGGATCATCCACACCATCAATGGTTGGTGCAGTCAAAAA ATGGCAAAAGTCTGACCCTCAGAAATCCCTAGACACATGGAGAAGATTGTCAGAGGCGAATTCAGCATTGGAATTGCAGC TCAACTTGTTAAGCAAATTAGCAAAGGAGCAGTGGGATGCATACAAATCTGTGATTGACAGCTGCAGCATACTCAGATCA GATAAGTGGATAGAACAAGCTTCTGAACCTGTAAAGGAAGCAGTTATTAAAGCACTGCTGGGTGCAAGAGATGCCATGCT GGGAATTAGATATCATATGCGCCTGATGGGCGAGGCTTCAGGGGTTCCAATTGAACCTGAAACACAAACACAACTTCTGG ATGCTACAATGAACTTGGAAGGAGTATTATTGGCTGGAGTTCCAGGGGCAGGAGGATATGATGCAGTCTTTGCTGTTACT TTGGGAGATTCGAGCAGCAATGTGACTAAAGTATGGGGCTCACTGAATGTTCTTGCCATGTTGGTTAAAGAAGACCCTTG TGGTGTTTCTTTAGAAAGTGCTGACCCAAGAACCAATGAAATCACATCAGCAGTGTCTTCAATTCATATTGAATAG
Protein sequence (LotjaGi1g1v0283600.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQALSSVQVLASTPSSNPSILKSNLMHGHGESRNPFVEYAVQYSVAAAYATFDQSKKDLLHKLLLQGLDITILGSNDFYS YRNEIEKRGLPLTPESLATLPPFAFISFNTDDAIEGSCKPEVAKTGLGSSAAMTTAVVAALLHYLGVVELSSTKDHGNRK DIADLDLVHKIAQTAHCVAQGKVGSGFDVSSAVYGSHRYVRFSPEVISSAQVAAQVVPLPEVITDILKGNWDHDRTEFSL PPLMTLLLGEPGTGGSSTPSMVGAVKKWQKSDPQKSLDTWRRLSEANSALELQLNLLSKLAKEQWDAYKSVIDSCSILRS DKWIEQASEPVKEAVIKALLGARDAMLGIRYHMRLMGEASGVPIEPETQTQLLDATMNLEGVLLAGVPGAGGYDAVFAVT LGDSSSNVTKVWGSLNVLAMLVKEDPCGVSLESADPRTNEITSAVSSIHIE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PIRSF | 13 | 441 | 429 | 3.0E-162 | ||
| PANTHER | 29 | 438 | 410 | 8.9E-170 | – | |
| PANTHER | 29 | 438 | 410 | 8.9E-170 | ||
| TIGRFAM | 31 | 438 | 408 | 5.0E-140 | ||
| SUPERFAMILY | 66 | 256 | 191 | 3.87E-17 | ||
| Pfam | 118 | 196 | 79 | 1.0E-18 | ||
| Pfam | 349 | 405 | 57 | 6.3E-6 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Phosphomevalonate kinase activity | Catalysis of the reaction: (R)-5-phosphomevalonate + ATP = (R)-5-diphosphomevalonate + ADP + H(+). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
Expression pattern of LotjaGi1g1v0283600.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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