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LotjaGi1g1v0283600.7

Overview

Field Value
Gene ID LotjaGi1g1v0283600
Transcript ID LotjaGi1g1v0283600.7
Related isoforms 6
Lotus japonicus genome version Gifu v1.2
Description Phosphomevalonate kinase; TAIR: AT1G31910.1 GHMP kinase family protein; Swiss-Prot: sp|Q9C6T1|PMK_ARATH Phosphomevalonate kinase, peroxisomal; TrEMBL-Plants: tr|A0A075EBV2|A0A075EBV2_ASTME Phosphomevalonate kinase 1; Found in the gene: LotjaGi1g1v0283600
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:69069617..69075778) extracted from Lotus japonicus Gifu genome v1.2.

TCAATGGCCGTGTAAGTTAATCACATTCATCACTTATAATTTCAATCAATTAACTGCAACTAACCCATGTTTACGCACTC ACATCACAGAGTTGCTTCTGCTCCTGGGAAGGTGTTGATGACAGGGGGTTACCTCATTCTGGAGCGACCCAATGCAGGCC TTGTCCTCAGTACAAGTGCTCGCTTCTACGCCATCATCAAACCCTTCCATCCTCAAATCAAACCTGATGCATGGGCATGG GTACTTGAACCTCTCTACTCTTCTTATTCATCTTCTCCTACTTGTTGATATTTGATCTTTCATTGCTTGATTTCAGGGTT GGACAGATGTCAAATTAACCTCCCCTCAGCTCTCCAGAGAAGCCTTGTACAAACTAGCTCTCAATAATCTCACCATCCAA AATGTTTCCTCATGGCAAGTATTTTCCATTTCTCTAATTCAACCTCAAATCAATTGCATATTTATCCGTTTGGAAGAGCT TATTTGAGCTTATATGATCGCATAAGCGCTTGTGTAAGTGTTTGGGAGAGCTTATGCAAACAGCTTATGGTAGGCCATAA GCTGTTTTGAGCTTATTTCCATAAGCTACTCATGATAGCTTATGAAAAAGAGCTTATGCTTATGTATAACTTATTTCAAT TTATTTCAATAAATTTTTAAAAATAGCTTATGAATAAGCGCATGACCATAAGCGCTTAATTAAGCTGTTTTCCCAAACGG GTATGTGAAATCAACAATAGCTTATTGGAGGTGGCAGTGTACAAATTTTAGGGGGGGCTAATACAGTTTTTGAATGTTCC TAGTTCCGTCCCTGCATGTAATATTGAAATTGTGTATGTATTGGTGTAGTTAGGCTTACAGGGACTGGTATTGTTGTTTC AGTGAATCAAGGAATCCTTTTGTGGAATATGCAGTGCAGTATTCTGTGGCTGCAGCATATGCGACGTTTGACCAGAGTAA AAAGGACTTGTTACACAAACTACTTTTACAAGGTAACAATGCTATGTTTTTCGACCCTTTAATAAACGAACATGTAACGA GAGCTTCCAACATTCAATTTTTATAGCTGGGTTGGTCTTGTAGGTCTTGACATTACAATCTTGGGTTCCAATGATTTTTA TTCATACAGGAATGAGGTAATTTACTCCGTTTTTTGGTATGCTTTTCTACAATTCTTTGCTCTTGTTTTCCCCTCGTTAG CTTTTTTGGATGCCCTGCACTTTTCATATGGTATTTATTTATAACCTTCGATCAAGGCATTTATTCCTTGTTAAAGTTAA ATACTTCTGCAGATTGAGAAACGTGGACTCCCTTTGACACCAGAATCATTGGCCACTCTTCCACCCTTTGCTTTCATTTC CTTCAACACTGATGATGCTATTGAAGGAAGTTGTAAGCCTGAAGTAGCTAAAACTGGTTTGGGCTCATCTGCAGCAATGA CAACAGCTGTAGTTGCTGCTTTACTTCATTACCTTGGTGTCGTAGAGCTTTCCTCTACGAAAGATCACGGGAACAGAAAG GACATTGCAGATCTTGATCTGGTGCATAAAATAGCTCAAACTGCACATTGTGTTGCACAGGGGAAGGTAGGTAGTGGGTT TGATGTTAGCTCAGCTGTGTATGGCAGTCATCGTTATGTGCGGTTTTCACCAGAAGTGATTTCTTCCGCTCAGGTCTGCA CACTTCATTCCTCTTATCATTTGGCTTGTGTGTCAATCTACAATATTACGATTCTTTCTGATTCAAGTCTGTCACATAAT ATACAAAATAAAGAGATACATGACTTAACTTACTATGCAAGTGTTCTGAATGGAAATGGTGTAATGCATCCTCCCTGGTT TCTTTGAACCATGTTTAGCTTCCATCTTGAGATCAATATTATCTGTGAATTCTTGAAATACTCGTGAGAGATATGTCTGT ATATTATGTAAGTCACCCCTGTGCATGCATTTCAGTCTATTTCCTCAAACTTGTAAATTTGGTACAATGTTCCATCCATA GGTTTTTTTAGTTGGAGTAAAACAAACCCCAAGGTAACTAATTATTGATTTAGCCTCATAATTTTACCTGTTGTCGTTGA CCACATGCTGCTGGTTATCTCTTACATTAGTTGACCACATGCTGTTCTTGGAATTATTAGAATGTTCCAGAAACATCAAT AACTTAGTAGTCTTTGTTTTATTGGCTTTGTAGGTTGCAGCTCAAGTAGTGCCCTTGCCAGAAGTTATCACTGACATTCT AAAAGGAAACTGGGACCATGACAGGACCGAGTTCTCTTTACCACCTTTGATGACTCTTGTAAGCAACTTCAATTTTTGCA ACTGTTGGGATATGTTCACATGTCTTGTAATTATGGCTATGGGCACTTACTTCCTCTCTGCCTCTCTTCCCTCAATATTT CGAAGGGATGGGTGGTGGGATGTACCTAATTCTATAGTTGTACTTGCAATTTCTATTCATAACCTTATTTTAACGGTTAA GAAAAAATGTGTTTTCTCCAGGCTTGTTAATAGCGCGCTATAGCGTAGCGCCCTAGGGGTTCACCGCTACTCCACTATTC ACCGCTATTTGCGCTATTTGCCGCTATAGCGCCGCAATAGCGTTTTTTGGGCTTGCCGCTACACTACGCTATCCGCCATT AACAACCCTGGTTTGCTCATGATTTAGGCTCTTCTCCTCTTACCATTTCTTAGGACTTTTCAAAATTTGTAGGCTTTTGT TCCATGTAAGGCTTTTCGTATCCACAATCCACAGTTTGGACTCCCGGTTACCATGCCTTATGATGTCTAAGATCTTGCCT TTTATTGAACTTTTTTATTGTTTAGCTTTAGACTTTTTTGGTTGAATACTTGGTTTGTTGTCCAGTATCCAGTGCAGTGC ACTGCCAACTACTCAGCCTAATGTGATATTTACAATTCAGGTGGTGTATTCTTGATTATTACAATTGTGTGAAGGAAACA ATTAATAACATCAATGGCAGAGGTTTTAGTTCCCAAGGATCAGGCTGTTTGTCTTGATTTAAAGAAAATTATCCATGTGA CCATGTGAGATTTGGAGGCTAAGAGCCATTGAAGGCTTATCTATTAGTTCCTTGTTTCTCTGTGTTGTTTTATATTATTG TGATTTTCTATGATTAGTTTATTGTGAATTTGTGAGCAGCAAATGTAAACATTGAAGTGCATTTTAGTTAATGACTTAAG AGGCAGAAGCTTAATGCTTCTTGTGCCATAAATTCTTGAAATCAAGTTAATTAATCTAATTGTGCAAGTTACCAGTTTAA CTTACAGAAAGCTTGGTGCTTCAATTTTCCAATTATATTCTGATTCTGAGTAGTACAAAGGAGAGCCTTCGTGTAACGGT TAAAGTTGCTAGGCAAGGTAAGGCTGCCTAGTGCCTATAATAGACCCCCAATGAGTTCGACCCTGCCGTGGCCAGAGTTT ATTAATATCATGTTCTCTGTTTTCAATATGGGTGAATAGCTCATAAGATTCACTTAAACAGTTACCAACTTTCAAAATCA AAGAAGTTGAACCATATGTTACAAGGTTGAATTTATGTCCACAACTACATATTCACGACAAACAGTTACCATCTTTTTTC ATATTAAAGGAAATGTATTAGTAGGTGTCCCAGGATCTCTTTCTTGCTCTGTATCCTGTTCTGGTTCAGCAACTGACTTG ATATGAATATCTATATTGAACAACTATGGTGTGGAAATTATTCCCATTTCTCTCTTACAAGCATCTCTCTCTCTCTCTCT CTCTCTCTCTCTCTCCTGTATCCCCTAAATTTCATTTTTCCAAATACTGTTTTAACTTGTTTGACATATGAACTCTCTTG GTTCCCTTATTGATGCCTTTATTTAGTTATTAGGAGAACCTGGAACTGGTGGATCATCCACACCATCAATGGTTGGTGCA GTCAAAAAATGGCAAAAGTCTGACCCTCAGAAATCCCTAGACACATGGAGAAGATTGTCAGAGGCGAATTCAGCATTGGA ATTGCAGCTCAACTTGTTAAGCAAATTAGCAAAGGAGCAGTGGGATGCATACAAATCTGTGATTGACAGCTGCAGCATAC TCAGATCAGATAAGGTATTTATTTGATATCATTTGTGGTTGTTTAATTCATTGAAGTTAGTCAAAAACTGAATATTTATT ATTTTGTTACTAAAGTGTATTGATTCACAAAGCTCTCCATTGGCCTCAAATAACTTTGAACATTATATTTGGACGGTAAT CCTTAAATTGGATTAGAGTTTGATACTTTTCTTCTCATGTCAGCTCTTCATTAAATAGGACGCCTATCTTGATTAGTATA CTTCTCTTATTAGTTTTGATTGGTTTGAAAGACAGACATGCAGCAGTATGTCTGACTAGAGCTACCTTGGAAATGAGTAG AGAAGCTTATTTGCTGCCTGCAGGCGACCTTCACTCTCATTATAGGTTACTAGAATTTAAAATATTCTTGAGAGTCTGAT TCTGGCTTGATGTAGTGTTATAAGTTACTTTAAATTTTAACACCCTTGATTGTTTTTGTACCTCTTGATTTCCTTCATGC TTTGATATGACCTTATTACCTGAGAGTTTTGAACCTTGTCACTCACAATAGATTCAAACCTGATGATTATGGAATGATGA ACATTTCCGGGGCCCAACTATAATTGATCAGTTTGGTAACCCTTAGAAATGGAGGCTGAACAATTCACTGATGGCATTTA TGAAAAACTGTTTCAAAGTCACCAGTTAAATTTACGTCCCCATTTTTAAGGGCATACCCAGACTGACCTTTTAAGGGGAA AGATTTGACGGGATCCTTTCATGTGGCATGGATATGAGGAGGAGCAAAAAAAAAGTTGTTTCTCCTACCTTGCTTCTCAT GCCCAGAAATTGTATTTAATATTTTTGATTATAGGGAAGCGCCCAAGCTGTATAAATCTATGATTCAGTTAACTCCAAAC GAAGTTCTGTAGCTATTGCAGGCCTGGGTTTCAGTTTCAGGCTGTAAACTTTTTAAGTACATGTGATGTTATTTTCTTGG GACTGCTCTTTCTTGCTGTCAAGTTTTAATAATCTTTGATGTATTGTGACATTTCTCCAAGCTGTATAAATCTATGATTC AGTTAACTCCAAACGAAGTTCTGTAGCTATTGCAGGCCTGGGTTTCAGTTTCAGGCTGTAAACTTTTTAAGTACATGTGA TGTTATTTTCTTGGGACTGCTCTTTCTTGCTGTCAAGTTTTAATAATCTTTGATGTATTGTGACATTTCTCCTTGCTGAT CTTCTTTTGTGTTGATGCTTGGAATGCAAATTGCATAATCAGTGGATAGAACAAGCTTCTGAACCTGTAAAGGAAGCAGT TATTAAAGCACTGCTGGGTGCAAGAGATGCCATGCTGGGAATTAGATATCATATGCGCCTGATGGGCGAGGCTTCAGGGG TTCCAGTAAGTTCATTTCACTGATTCAGCACCTATTTGTATAGTTCTTTGTTGGTATGATGTCGATATTGCCTATGAAAA TGCATGTCCAGTAGACTGTGTTACCCTTAAGAATTTTATTTTTGTTGAAATTTAGTGATTTTGCTTCATACGTTAACTCC TGGTGAGGTACTAATCTCTAATCTTCCTACCATAAAAGTATAATATAGAACCATCCGTGTGGCTTCCCCAAACAAGTTAA GCTTTTTGGATAGTTGGTTCATAATATACTATCAGTCTATCGGAGCTTCTATGGCTATATGGTCTAGAGTTAAGATACGA ATTAAATTGTGTTTATGGAACTTAAATATGCTGTATTTAGTTAAGTGTAGTCTGGTTTGCTTTCCTGAGTGATCAATCAT TTAAAAGTTTAACAATTTATGAGTTCAGCAGTCTCTTGACTTGTAAAGTATACAGATTGAACCTGAAACACAAACACAAC TTCTGGATGCTACAATGAACTTGGAAGGAGTATTATTGGCTGGAGTTCCAGGGGCAGGAGGATATGATGCAGTCTTTGCT GTTACTTTGGGAGATTCGAGCAGCAATGTGACTAAAGTATGGGGCTCACTGAATGTTCTTGCCATGTTGGTTAAAGAAGA CCCTTGTGGTGTTTCTTTAGAAAGTGCTGACCCAAGAACCAATGAAATCACATCAGCAGTGTCTTCAATTCATATTGAAT AG 

CDS sequence (LotjaGi1g1v0283600.7) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCCGTAGTTGCTTCTGCTCCTGGGAAGGTGTTGATGACAGGGGGTTACCTCATTCTGGAGCGACCCAATGCAGGCCT TGTCCTCAGTACAAGTGCTCGCTTCTACGCCATCATCAAACCCTTCCATCCTCAAATCAAACCTGATGCATGGGGTTGGA CAGATGTCAAATTAACCTCCCCTCAGCTCTCCAGAGAAGCCTTGTACAAACTAGCTCTCAATAATCTCACCATCCAAAAT GTTTCCTCATGTGAATCAAGGAATCCTTTTGTGGAATATGCAGTGCAGTATTCTGTGGCTGCAGCATATGCGACGTTTGA CCAGAGTAAAAAGGACTTGTTACACAAACTACTTTTACAAGGTCTTGACATTACAATCTTGGGTTCCAATGATTTTTATT CATACAGGAATGAGATTGAGAAACGTGGACTCCCTTTGACACCAGAATCATTGGCCACTCTTCCACCCTTTGCTTTCATT TCCTTCAACACTGATGATGCTATTGAAGGAAGTTGTAAGCCTGAAGTAGCTAAAACTGGTTTGGGCTCATCTGCAGCAAT GACAACAGCTGTAGTTGCTGCTTTACTTCATTACCTTGGTGTCGTAGAGCTTTCCTCTACGAAAGATCACGGGAACAGAA AGGACATTGCAGATCTTGATCTGGTGCATAAAATAGCTCAAACTGCACATTGTGTTGCACAGGGGAAGGTAGGTAGTGGG TTTGATGTTAGCTCAGCTGTGTATGGCAGTCATCGTTATGTGCGGTTTTCACCAGAAGTGATTTCTTCCGCTCAGGTTGC AGCTCAAGTAGTGCCCTTGCCAGAAGTTATCACTGACATTCTAAAAGGAAACTGGGACCATGACAGGACCGAGTTCTCTT TACCACCTTTGATGACTCTTTTATTAGGAGAACCTGGAACTGGTGGATCATCCACACCATCAATGGTTGGTGCAGTCAAA AAATGGCAAAAGTCTGACCCTCAGAAATCCCTAGACACATGGAGAAGATTGTCAGAGGCGAATTCAGCATTGGAATTGCA GCTCAACTTGTTAAGCAAATTAGCAAAGGAGCAGTGGGATGCATACAAATCTGTGATTGACAGCTGCAGCATACTCAGAT CAGATAAGTGGATAGAACAAGCTTCTGAACCTGTAAAGGAAGCAGTTATTAAAGCACTGCTGGGTGCAAGAGATGCCATG CTGGGAATTAGATATCATATGCGCCTGATGGGCGAGGCTTCAGGGGTTCCAATTGAACCTGAAACACAAACACAACTTCT GGATGCTACAATGAACTTGGAAGGAGTATTATTGGCTGGAGTTCCAGGGGCAGGAGGATATGATGCAGTCTTTGCTGTTA CTTTGGGAGATTCGAGCAGCAATGTGACTAAAGTATGGGGCTCACTGAATGTTCTTGCCATGTTGGTTAAAGAAGACCCT TGTGGTGTTTCTTTAGAAAGTGCTGACCCAAGAACCAATGAAATCACATCAGCAGTGTCTTCAATTCATATTGAATAG 

Protein sequence (LotjaGi1g1v0283600.7) extracted from Lotus japonicus Gifu v1.2 Proteins.

MAVVASAPGKVLMTGGYLILERPNAGLVLSTSARFYAIIKPFHPQIKPDAWGWTDVKLTSPQLSREALYKLALNNLTIQN VSSCESRNPFVEYAVQYSVAAAYATFDQSKKDLLHKLLLQGLDITILGSNDFYSYRNEIEKRGLPLTPESLATLPPFAFI SFNTDDAIEGSCKPEVAKTGLGSSAAMTTAVVAALLHYLGVVELSSTKDHGNRKDIADLDLVHKIAQTAHCVAQGKVGSG FDVSSAVYGSHRYVRFSPEVISSAQVAAQVVPLPEVITDILKGNWDHDRTEFSLPPLMTLLLGEPGTGGSSTPSMVGAVK KWQKSDPQKSLDTWRRLSEANSALELQLNLLSKLAKEQWDAYKSVIDSCSILRSDKWIEQASEPVKEAVIKALLGARDAM LGIRYHMRLMGEASGVPIEPETQTQLLDATMNLEGVLLAGVPGAGGYDAVFAVTLGDSSSNVTKVWGSLNVLAMLVKEDP CGVSLESADPRTNEITSAVSSIHIE 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 1 492 492 4.3E-206
PIRSF 1 495 495 2.3E-200
PANTHER 1 492 492 4.3E-206
SUPERFAMILY 2 260 259 1.09E-22
TIGRFAM 4 492 489 1.0E-173
Pfam 172 250 79 1.2E-18
Pfam 403 458 56 7.4E-6

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Phosphomevalonate kinase activity Catalysis of the reaction: (R)-5-phosphomevalonate + ATP = (R)-5-diphosphomevalonate + ADP + H(+).
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.

Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0283600.7, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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