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Field | Value |
---|---|
Gene ID | LotjaGi1g1v0283600 |
Transcript ID | LotjaGi1g1v0283600.7 |
Related isoforms 6 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Phosphomevalonate kinase; TAIR: AT1G31910.1 GHMP kinase family protein; Swiss-Prot: sp|Q9C6T1|PMK_ARATH Phosphomevalonate kinase, peroxisomal; TrEMBL-Plants: tr|A0A075EBV2|A0A075EBV2_ASTME Phosphomevalonate kinase 1; Found in the gene: LotjaGi1g1v0283600 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:69069617..69075778) extracted from Lotus japonicus Gifu genome v1.2.
TCAATGGCCGTGTAAGTTAATCACATTCATCACTTATAATTTCAATCAATTAACTGCAACTAACCCATGTTTACGCACTC ACATCACAGAGTTGCTTCTGCTCCTGGGAAGGTGTTGATGACAGGGGGTTACCTCATTCTGGAGCGACCCAATGCAGGCC TTGTCCTCAGTACAAGTGCTCGCTTCTACGCCATCATCAAACCCTTCCATCCTCAAATCAAACCTGATGCATGGGCATGG GTACTTGAACCTCTCTACTCTTCTTATTCATCTTCTCCTACTTGTTGATATTTGATCTTTCATTGCTTGATTTCAGGGTT GGACAGATGTCAAATTAACCTCCCCTCAGCTCTCCAGAGAAGCCTTGTACAAACTAGCTCTCAATAATCTCACCATCCAA AATGTTTCCTCATGGCAAGTATTTTCCATTTCTCTAATTCAACCTCAAATCAATTGCATATTTATCCGTTTGGAAGAGCT TATTTGAGCTTATATGATCGCATAAGCGCTTGTGTAAGTGTTTGGGAGAGCTTATGCAAACAGCTTATGGTAGGCCATAA GCTGTTTTGAGCTTATTTCCATAAGCTACTCATGATAGCTTATGAAAAAGAGCTTATGCTTATGTATAACTTATTTCAAT TTATTTCAATAAATTTTTAAAAATAGCTTATGAATAAGCGCATGACCATAAGCGCTTAATTAAGCTGTTTTCCCAAACGG GTATGTGAAATCAACAATAGCTTATTGGAGGTGGCAGTGTACAAATTTTAGGGGGGGCTAATACAGTTTTTGAATGTTCC TAGTTCCGTCCCTGCATGTAATATTGAAATTGTGTATGTATTGGTGTAGTTAGGCTTACAGGGACTGGTATTGTTGTTTC AGTGAATCAAGGAATCCTTTTGTGGAATATGCAGTGCAGTATTCTGTGGCTGCAGCATATGCGACGTTTGACCAGAGTAA AAAGGACTTGTTACACAAACTACTTTTACAAGGTAACAATGCTATGTTTTTCGACCCTTTAATAAACGAACATGTAACGA GAGCTTCCAACATTCAATTTTTATAGCTGGGTTGGTCTTGTAGGTCTTGACATTACAATCTTGGGTTCCAATGATTTTTA TTCATACAGGAATGAGGTAATTTACTCCGTTTTTTGGTATGCTTTTCTACAATTCTTTGCTCTTGTTTTCCCCTCGTTAG CTTTTTTGGATGCCCTGCACTTTTCATATGGTATTTATTTATAACCTTCGATCAAGGCATTTATTCCTTGTTAAAGTTAA ATACTTCTGCAGATTGAGAAACGTGGACTCCCTTTGACACCAGAATCATTGGCCACTCTTCCACCCTTTGCTTTCATTTC CTTCAACACTGATGATGCTATTGAAGGAAGTTGTAAGCCTGAAGTAGCTAAAACTGGTTTGGGCTCATCTGCAGCAATGA CAACAGCTGTAGTTGCTGCTTTACTTCATTACCTTGGTGTCGTAGAGCTTTCCTCTACGAAAGATCACGGGAACAGAAAG GACATTGCAGATCTTGATCTGGTGCATAAAATAGCTCAAACTGCACATTGTGTTGCACAGGGGAAGGTAGGTAGTGGGTT TGATGTTAGCTCAGCTGTGTATGGCAGTCATCGTTATGTGCGGTTTTCACCAGAAGTGATTTCTTCCGCTCAGGTCTGCA CACTTCATTCCTCTTATCATTTGGCTTGTGTGTCAATCTACAATATTACGATTCTTTCTGATTCAAGTCTGTCACATAAT ATACAAAATAAAGAGATACATGACTTAACTTACTATGCAAGTGTTCTGAATGGAAATGGTGTAATGCATCCTCCCTGGTT TCTTTGAACCATGTTTAGCTTCCATCTTGAGATCAATATTATCTGTGAATTCTTGAAATACTCGTGAGAGATATGTCTGT ATATTATGTAAGTCACCCCTGTGCATGCATTTCAGTCTATTTCCTCAAACTTGTAAATTTGGTACAATGTTCCATCCATA GGTTTTTTTAGTTGGAGTAAAACAAACCCCAAGGTAACTAATTATTGATTTAGCCTCATAATTTTACCTGTTGTCGTTGA CCACATGCTGCTGGTTATCTCTTACATTAGTTGACCACATGCTGTTCTTGGAATTATTAGAATGTTCCAGAAACATCAAT AACTTAGTAGTCTTTGTTTTATTGGCTTTGTAGGTTGCAGCTCAAGTAGTGCCCTTGCCAGAAGTTATCACTGACATTCT AAAAGGAAACTGGGACCATGACAGGACCGAGTTCTCTTTACCACCTTTGATGACTCTTGTAAGCAACTTCAATTTTTGCA ACTGTTGGGATATGTTCACATGTCTTGTAATTATGGCTATGGGCACTTACTTCCTCTCTGCCTCTCTTCCCTCAATATTT CGAAGGGATGGGTGGTGGGATGTACCTAATTCTATAGTTGTACTTGCAATTTCTATTCATAACCTTATTTTAACGGTTAA GAAAAAATGTGTTTTCTCCAGGCTTGTTAATAGCGCGCTATAGCGTAGCGCCCTAGGGGTTCACCGCTACTCCACTATTC ACCGCTATTTGCGCTATTTGCCGCTATAGCGCCGCAATAGCGTTTTTTGGGCTTGCCGCTACACTACGCTATCCGCCATT AACAACCCTGGTTTGCTCATGATTTAGGCTCTTCTCCTCTTACCATTTCTTAGGACTTTTCAAAATTTGTAGGCTTTTGT TCCATGTAAGGCTTTTCGTATCCACAATCCACAGTTTGGACTCCCGGTTACCATGCCTTATGATGTCTAAGATCTTGCCT TTTATTGAACTTTTTTATTGTTTAGCTTTAGACTTTTTTGGTTGAATACTTGGTTTGTTGTCCAGTATCCAGTGCAGTGC ACTGCCAACTACTCAGCCTAATGTGATATTTACAATTCAGGTGGTGTATTCTTGATTATTACAATTGTGTGAAGGAAACA ATTAATAACATCAATGGCAGAGGTTTTAGTTCCCAAGGATCAGGCTGTTTGTCTTGATTTAAAGAAAATTATCCATGTGA CCATGTGAGATTTGGAGGCTAAGAGCCATTGAAGGCTTATCTATTAGTTCCTTGTTTCTCTGTGTTGTTTTATATTATTG TGATTTTCTATGATTAGTTTATTGTGAATTTGTGAGCAGCAAATGTAAACATTGAAGTGCATTTTAGTTAATGACTTAAG AGGCAGAAGCTTAATGCTTCTTGTGCCATAAATTCTTGAAATCAAGTTAATTAATCTAATTGTGCAAGTTACCAGTTTAA CTTACAGAAAGCTTGGTGCTTCAATTTTCCAATTATATTCTGATTCTGAGTAGTACAAAGGAGAGCCTTCGTGTAACGGT TAAAGTTGCTAGGCAAGGTAAGGCTGCCTAGTGCCTATAATAGACCCCCAATGAGTTCGACCCTGCCGTGGCCAGAGTTT ATTAATATCATGTTCTCTGTTTTCAATATGGGTGAATAGCTCATAAGATTCACTTAAACAGTTACCAACTTTCAAAATCA AAGAAGTTGAACCATATGTTACAAGGTTGAATTTATGTCCACAACTACATATTCACGACAAACAGTTACCATCTTTTTTC ATATTAAAGGAAATGTATTAGTAGGTGTCCCAGGATCTCTTTCTTGCTCTGTATCCTGTTCTGGTTCAGCAACTGACTTG ATATGAATATCTATATTGAACAACTATGGTGTGGAAATTATTCCCATTTCTCTCTTACAAGCATCTCTCTCTCTCTCTCT CTCTCTCTCTCTCTCCTGTATCCCCTAAATTTCATTTTTCCAAATACTGTTTTAACTTGTTTGACATATGAACTCTCTTG GTTCCCTTATTGATGCCTTTATTTAGTTATTAGGAGAACCTGGAACTGGTGGATCATCCACACCATCAATGGTTGGTGCA GTCAAAAAATGGCAAAAGTCTGACCCTCAGAAATCCCTAGACACATGGAGAAGATTGTCAGAGGCGAATTCAGCATTGGA ATTGCAGCTCAACTTGTTAAGCAAATTAGCAAAGGAGCAGTGGGATGCATACAAATCTGTGATTGACAGCTGCAGCATAC TCAGATCAGATAAGGTATTTATTTGATATCATTTGTGGTTGTTTAATTCATTGAAGTTAGTCAAAAACTGAATATTTATT ATTTTGTTACTAAAGTGTATTGATTCACAAAGCTCTCCATTGGCCTCAAATAACTTTGAACATTATATTTGGACGGTAAT CCTTAAATTGGATTAGAGTTTGATACTTTTCTTCTCATGTCAGCTCTTCATTAAATAGGACGCCTATCTTGATTAGTATA CTTCTCTTATTAGTTTTGATTGGTTTGAAAGACAGACATGCAGCAGTATGTCTGACTAGAGCTACCTTGGAAATGAGTAG AGAAGCTTATTTGCTGCCTGCAGGCGACCTTCACTCTCATTATAGGTTACTAGAATTTAAAATATTCTTGAGAGTCTGAT TCTGGCTTGATGTAGTGTTATAAGTTACTTTAAATTTTAACACCCTTGATTGTTTTTGTACCTCTTGATTTCCTTCATGC TTTGATATGACCTTATTACCTGAGAGTTTTGAACCTTGTCACTCACAATAGATTCAAACCTGATGATTATGGAATGATGA ACATTTCCGGGGCCCAACTATAATTGATCAGTTTGGTAACCCTTAGAAATGGAGGCTGAACAATTCACTGATGGCATTTA TGAAAAACTGTTTCAAAGTCACCAGTTAAATTTACGTCCCCATTTTTAAGGGCATACCCAGACTGACCTTTTAAGGGGAA AGATTTGACGGGATCCTTTCATGTGGCATGGATATGAGGAGGAGCAAAAAAAAAGTTGTTTCTCCTACCTTGCTTCTCAT GCCCAGAAATTGTATTTAATATTTTTGATTATAGGGAAGCGCCCAAGCTGTATAAATCTATGATTCAGTTAACTCCAAAC GAAGTTCTGTAGCTATTGCAGGCCTGGGTTTCAGTTTCAGGCTGTAAACTTTTTAAGTACATGTGATGTTATTTTCTTGG GACTGCTCTTTCTTGCTGTCAAGTTTTAATAATCTTTGATGTATTGTGACATTTCTCCAAGCTGTATAAATCTATGATTC AGTTAACTCCAAACGAAGTTCTGTAGCTATTGCAGGCCTGGGTTTCAGTTTCAGGCTGTAAACTTTTTAAGTACATGTGA TGTTATTTTCTTGGGACTGCTCTTTCTTGCTGTCAAGTTTTAATAATCTTTGATGTATTGTGACATTTCTCCTTGCTGAT CTTCTTTTGTGTTGATGCTTGGAATGCAAATTGCATAATCAGTGGATAGAACAAGCTTCTGAACCTGTAAAGGAAGCAGT TATTAAAGCACTGCTGGGTGCAAGAGATGCCATGCTGGGAATTAGATATCATATGCGCCTGATGGGCGAGGCTTCAGGGG TTCCAGTAAGTTCATTTCACTGATTCAGCACCTATTTGTATAGTTCTTTGTTGGTATGATGTCGATATTGCCTATGAAAA TGCATGTCCAGTAGACTGTGTTACCCTTAAGAATTTTATTTTTGTTGAAATTTAGTGATTTTGCTTCATACGTTAACTCC TGGTGAGGTACTAATCTCTAATCTTCCTACCATAAAAGTATAATATAGAACCATCCGTGTGGCTTCCCCAAACAAGTTAA GCTTTTTGGATAGTTGGTTCATAATATACTATCAGTCTATCGGAGCTTCTATGGCTATATGGTCTAGAGTTAAGATACGA ATTAAATTGTGTTTATGGAACTTAAATATGCTGTATTTAGTTAAGTGTAGTCTGGTTTGCTTTCCTGAGTGATCAATCAT TTAAAAGTTTAACAATTTATGAGTTCAGCAGTCTCTTGACTTGTAAAGTATACAGATTGAACCTGAAACACAAACACAAC TTCTGGATGCTACAATGAACTTGGAAGGAGTATTATTGGCTGGAGTTCCAGGGGCAGGAGGATATGATGCAGTCTTTGCT GTTACTTTGGGAGATTCGAGCAGCAATGTGACTAAAGTATGGGGCTCACTGAATGTTCTTGCCATGTTGGTTAAAGAAGA CCCTTGTGGTGTTTCTTTAGAAAGTGCTGACCCAAGAACCAATGAAATCACATCAGCAGTGTCTTCAATTCATATTGAAT AG
CDS sequence (LotjaGi1g1v0283600.7) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCGTAGTTGCTTCTGCTCCTGGGAAGGTGTTGATGACAGGGGGTTACCTCATTCTGGAGCGACCCAATGCAGGCCT TGTCCTCAGTACAAGTGCTCGCTTCTACGCCATCATCAAACCCTTCCATCCTCAAATCAAACCTGATGCATGGGGTTGGA CAGATGTCAAATTAACCTCCCCTCAGCTCTCCAGAGAAGCCTTGTACAAACTAGCTCTCAATAATCTCACCATCCAAAAT GTTTCCTCATGTGAATCAAGGAATCCTTTTGTGGAATATGCAGTGCAGTATTCTGTGGCTGCAGCATATGCGACGTTTGA CCAGAGTAAAAAGGACTTGTTACACAAACTACTTTTACAAGGTCTTGACATTACAATCTTGGGTTCCAATGATTTTTATT CATACAGGAATGAGATTGAGAAACGTGGACTCCCTTTGACACCAGAATCATTGGCCACTCTTCCACCCTTTGCTTTCATT TCCTTCAACACTGATGATGCTATTGAAGGAAGTTGTAAGCCTGAAGTAGCTAAAACTGGTTTGGGCTCATCTGCAGCAAT GACAACAGCTGTAGTTGCTGCTTTACTTCATTACCTTGGTGTCGTAGAGCTTTCCTCTACGAAAGATCACGGGAACAGAA AGGACATTGCAGATCTTGATCTGGTGCATAAAATAGCTCAAACTGCACATTGTGTTGCACAGGGGAAGGTAGGTAGTGGG TTTGATGTTAGCTCAGCTGTGTATGGCAGTCATCGTTATGTGCGGTTTTCACCAGAAGTGATTTCTTCCGCTCAGGTTGC AGCTCAAGTAGTGCCCTTGCCAGAAGTTATCACTGACATTCTAAAAGGAAACTGGGACCATGACAGGACCGAGTTCTCTT TACCACCTTTGATGACTCTTTTATTAGGAGAACCTGGAACTGGTGGATCATCCACACCATCAATGGTTGGTGCAGTCAAA AAATGGCAAAAGTCTGACCCTCAGAAATCCCTAGACACATGGAGAAGATTGTCAGAGGCGAATTCAGCATTGGAATTGCA GCTCAACTTGTTAAGCAAATTAGCAAAGGAGCAGTGGGATGCATACAAATCTGTGATTGACAGCTGCAGCATACTCAGAT CAGATAAGTGGATAGAACAAGCTTCTGAACCTGTAAAGGAAGCAGTTATTAAAGCACTGCTGGGTGCAAGAGATGCCATG CTGGGAATTAGATATCATATGCGCCTGATGGGCGAGGCTTCAGGGGTTCCAATTGAACCTGAAACACAAACACAACTTCT GGATGCTACAATGAACTTGGAAGGAGTATTATTGGCTGGAGTTCCAGGGGCAGGAGGATATGATGCAGTCTTTGCTGTTA CTTTGGGAGATTCGAGCAGCAATGTGACTAAAGTATGGGGCTCACTGAATGTTCTTGCCATGTTGGTTAAAGAAGACCCT TGTGGTGTTTCTTTAGAAAGTGCTGACCCAAGAACCAATGAAATCACATCAGCAGTGTCTTCAATTCATATTGAATAG
Protein sequence (LotjaGi1g1v0283600.7) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAVVASAPGKVLMTGGYLILERPNAGLVLSTSARFYAIIKPFHPQIKPDAWGWTDVKLTSPQLSREALYKLALNNLTIQN VSSCESRNPFVEYAVQYSVAAAYATFDQSKKDLLHKLLLQGLDITILGSNDFYSYRNEIEKRGLPLTPESLATLPPFAFI SFNTDDAIEGSCKPEVAKTGLGSSAAMTTAVVAALLHYLGVVELSSTKDHGNRKDIADLDLVHKIAQTAHCVAQGKVGSG FDVSSAVYGSHRYVRFSPEVISSAQVAAQVVPLPEVITDILKGNWDHDRTEFSLPPLMTLLLGEPGTGGSSTPSMVGAVK KWQKSDPQKSLDTWRRLSEANSALELQLNLLSKLAKEQWDAYKSVIDSCSILRSDKWIEQASEPVKEAVIKALLGARDAM LGIRYHMRLMGEASGVPIEPETQTQLLDATMNLEGVLLAGVPGAGGYDAVFAVTLGDSSSNVTKVWGSLNVLAMLVKEDP CGVSLESADPRTNEITSAVSSIHIE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 1 | 492 | 492 | 4.3E-206 | – | |
PIRSF | 1 | 495 | 495 | 2.3E-200 | ||
PANTHER | 1 | 492 | 492 | 4.3E-206 | ||
SUPERFAMILY | 2 | 260 | 259 | 1.09E-22 | ||
TIGRFAM | 4 | 492 | 489 | 1.0E-173 | ||
Pfam | 172 | 250 | 79 | 1.2E-18 | ||
Pfam | 403 | 458 | 56 | 7.4E-6 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Phosphomevalonate kinase activity | Catalysis of the reaction: (R)-5-phosphomevalonate + ATP = (R)-5-diphosphomevalonate + ADP + H(+). | ||
Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
Expression pattern of LotjaGi1g1v0283600.7, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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