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Field | Value |
---|---|
Gene ID | LotjaGi1g1v0306500 |
Transcript ID | LotjaGi1g1v0306500.1 |
Lotus japonicus genome version | Gifu v1.2 |
Description | Methionine-tRNA ligase, putative; TAIR: AT2G40660.1 Nucleic acid-binding, OB-fold-like protein; Swiss-Prot: sp|Q9SVN5|SYMC_ARATH Methionine--tRNA ligase, cytoplasmic; TrEMBL-Plants: tr|I1KB73|I1KB73_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0306500 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:74722891..74735098) extracted from Lotus japonicus Gifu genome v1.2.
CAAACAAAATCCAAAAACAACAATGAAGATGAACAAGACAGAAACCTAAACCTAAAACCCTGCATTGCTGAACCATAATT TAGGAACATTGTGTAGAGATAGAGAAACAGTGAGAGAATTTGAACTTGAAAGGACAACACTATCAGCTTCAGATCATCAT TCTTCACTCATCAGAGATGGCTGCAGTTGATAGCAGAAAGAAATCGGTGGTTTTGGCTCTCTGCAAGCACCTTCAATTGG ATTCTGTAAGTATATGCCATGCCATGCCCACCATTCTTTTCTTTTCATTTCTTCATAGAAATTTCCATTTATCACTTAAA AATCATTGCTTGTGGGGTTTGCTTCAATGGGCAGAACAAAACTAGTGCTGCACTCAACTGGGTTGGGGTTGCATTGCATG TAGGCTGCATTGTCATTGATTTTAGAGATCACTAGATCATTGTTTTTGTTATCCAACTAGTAATCTTGGTAGATAGTGAA AATGTTTGCTGAATTCACCATTTCAATGTGATAGATATATCTGATGGAAATTCTCGTGCTCTATCTTTGCTTGCAGAGTG TTATTCCAGCTGATAATTTTGATAATGATATTAAGACTCTTTACTTGAACATCGCAGCAGCATCTGGACAGGAGGTTAAT CACTCTGTTGAGGTAAATGGCTATACCTCAGTTTGGCAACACCATTATATGCATTGATCACACCATTTTTATCATTCGGG GTTAAATGCTTCTGTGTCCTTGCTTATTTCTTCCCTATTTCTTTACTTTTTCTTCTTTCTTTGGATTAATACAGGATATT TAATACTCTCTGTATGTAGTTAAAAGCCCTTGATTCATCAAAAATTGATTATGATTTCGAGCATTGATATCAAATGCTGA CCTTGGAATTGATATTTAATGTGTCATAGAAAAATTGATATGTTCCCCGGAACTTGTATGTTTTGCCCTCTTTCTGTCAA TAATTCTGAGTTGTATATTCTTCATGTTTAGGTGTTGAAGTGGGTGGCATTCGCAGAAGCCTTCCCTGTGGCCCTTGACG CAAGCTTTGAGAATCTCAAGAAATTAAATGACGAACTGTCTGATAAGTCTGTGCTCCTGGGTAATGGATTGAAACCCTCT GAAGCTGATGTTGTAGTGTTTTCAGTGATTCATTCTTCCCTGGTAGGCACATTGTCATATTCATCATACGCTCATACTTA CTATGCTTTTCGAAAATTAGAATAGTGTGATAGAAGAATCAGAGAAAAGAAAAAGAATTTGCATCTGAATATTTCACTAT GATAAAACTGAATTGTACAATGAGAGATTGAATCCTTATATAGGATGCAGTGGCTTGTTGAACAAGCTAACTGAACAGTA ACTTCCTCTAACAGAAAGATAACTGACTCTAACAAACTTGACAGCTGTATACAGCTGTTACTAACAGAAATTTCAGTTGT GTCCAGCTGGCATTCCAGCTGGCACACACTTACACATTGAAACCGATATTTTCATATCAACAATATACCTATACTCTCTA ATACACCCCCTCAAACTGAAGGAGGTGACAAAAGCACTTGCTTGTCAACTACATTCAGTTTGTCCTTTAACAGTAGAAAC CTAGTTGGGGAGAGGGCCTTAGTGAATATGTCTGCCTTTTGATGTTCAGAGGGTACATGTTGAACTAGAAGACTCTTATC TTGGACCTTTTCCCTTACAAAAAATATATCCATTTCCATATGCTTTGTGCGAGTATGCAATATCGGATTGTGTGTCAAAA GCACTGTGCTCATGTTATCACAATAGACTGTAGGAATAGTGAATGGAATTTTCAGTTCTGTCAGTAAGGATTGAACCCAT AACAGTTCTGCAGTAGTATTGGCTAGGCTTCTATACTCTGCTTCAGTGCTTGATCTTGCAACTAAGGATTGCTTCTTGGC TGTCCAGGAAATGAGATTATAGCCTAGAAAAACACAGGACCCTGATGTAGACCTCCTATCATCAGGGTCAGATCCCCAAT CAGCATCACAGTAGGCAATGAGAGGAAGAGGCCTGGTCATGGAACAAGGTTGAAGAAGAATACCATGAGTTAGAGTACCT TTGAGGTACCTCAGAATTCTTTTAACAGCCTTCCAGTGTTCCTCATGAGGTTGTGCCATGAATTGGCACACTTTGTTTAC TGCAAAAGAGATTTCAGGCCTAGTAATAGTTGCATACTGAAGGGCACCAACCACACTTCTGTATTCAGTAGGATCCTTGA GAGCAGAACCTTCATTTTTGGACAGTTTGACTCCACATTGCATGGGAGTGGAAATGGCAGCTGCATCAAGCATGTTGACC TTAGTGAGGAGATCAGAAATATACTTGGTCTGATTGAGAAGCAAGTTGCCATTGGAAAGATGTGTGACTTGAACACCCAA AAAATAGTCCAGCTGACCCAATTGTTTGAGTGCAAAGATGGAATGTAATTGTGCTGTTAATTGTTGAATAAGTGACATAG AAGCCCCAGTGATGATGATATCATCTACATACACCAGCATATAGATACAGCCTTGAGAAGAATAGTAAGTAAACAAGGAA GGATCACACTTGCTAGCTTGGAAGCCAAACCTGATGAGAACCTCTTTTAGTCTATGAAACCAGGCCCTTGGAGCTTGCTT AAGACCATAGAGGGCCTTTTGCAGCTTGCAAACCAGATTCTTGTCCTTGTGTTCAAAACCAGGAGGTTGTACCATGTACA CTTCCTCCTCTAACACTCCATTAAGAAAGGCATTATTGACATCTAGTTGTTGTAATGGCCAGCCCCTTGAAATGGCAAGA GAAAGAATGAGTCTTACTGTGATAGGCTTCACCACTGGTGAGAAAGTTTCAGAATAGTCAAACCCTTGAACCTGACTATA TCCTTTGGCCACCAACCGAGCCTTATACTTGTTTATGGAACCATCTGGATTTTCCTTGATTCTGTAAATCCATTTGCAAC CAACTGGTGTTCTATTAGCTGGAAGAGGAACAAGGGTCCAAGTGCCATTGTTCATAAGAGCTGTGTACTCTTCTTGCATA GCCTTATACCATTTAGTATCCTTCATTGCTTGCTTGACAGAAGTAGGTTCCAGGTGAGTGAGCAACAGTGTGGGTTGAAG TCTGGGTTTAACTATCCCATTTTTAGCCCTTGTTTGCATAGGATGAGTGTTGACAATCACTGGAGGAGCTGCAGCAACCA CTGAAGCAGAGGTATCAGCTGACTGTGCAGAGGATGAAGGTACAGGTGGTGAAACAACTGCTGGAGTTGAAGTAGAAGGG TCATCAGCTGAGAGTGTAGCACTTGGAGGCTGCTGTTGTTGAGGAGAATCTTGTGGACCTGGTGAGGAATGACCAGAAGC TGCCAAAACAGGAGAACTAGGTGGTGCAGTGTGTGAAATTATTGGAATGGTAGATAAAGGATAAAATTCAGCTGAGGAAG AAGAAGAATGATCAGTAGGAAAAAGAATAGGATATGGAAAACGATGTTCATGAAAAAGGACATCTTTGGAGATATAAATT CTCCCAGATTGGTCCAAGCACTTATAGCCCTTGTGATTAATGGAATACCCTATAAACACACACTCTTTTGAATGTAAGGA CAACTTATTGGAATTATAAGGTCTTAGAAAAGGAAAGCAAGCTGAACCAAAGACCTTGAGACTCTTAAAATCTGGATATT GACCATACAGTTTGAAGTAAGGACTAGCACCTTGCAATGTAGTAGTAGACATTCTGTTTATGAGATAAGTGGCAGCAAGA AAAGCATGATCCCAGAATTGCAAAGGCATTGAGGCATGAGATAACAAGGCTAAGCCAGTTTCAACAATGTGCCTATGCTT TCTCTCAACACTACCATTTTGATGGTGAGTGTGTGGACAGGTTAGTCTATGAATGATGCCTAACTTCTGAAAGTGTGAGG TCAAGGGTTTAAACTCCCCTCCCCCATCTGTTTGGACACTTTTAAGTTTGTGTCCAAACTGCAACTCAACCATGGCTTGA AAATTTATAAAAGTTGCACAAGTGTCTGACTTTTTCTTCAAGGGAAAAACCCAAGTATACTTAGTACATGCATCAACACA TGTTAAAAAGTATAAAAAACCACAAGAGGATTCCAAAGAAGCTGGTCCCCACAAATCAGCAAAAACAAGCTCAAAGGGAG TATTGTAAACTGTATTGGAAGAAGAAGAAGGTAATCTATGAAGCTTACTTAAACAACAAGCTTTGCAAAATGAAAACACA CTTTTATTGCTTGGAACAGAAATATTACACAAGGAAAGGGTTTGTTTAAGTACATCATGATGAGGATGACCTAATCTTGA ATGCCACAAATCATAAACTGAAATACCACTACCACTATTACAAGAAACTAGATCAGAAACAGTAGATGAAACATTGACAG AATCAGCATTATTACATGGAACTAGACTAGGAACTATAGGAGAAACAGTTGCAGATTGCAAATCAATAGCAGGAGATGCT TTATTTGCTGCAGACTTGGAAGCTAAGCAAGCCTGGATAGAAGACAAAGGAGAAGAAGACTGTGGTTGTGAGCTGGCCTT GGTGAGTGGTCCATCAAAGTAATATAGACCATCATCTCCAACAGTACCAGTAAGAAGAAGTTCATAAGTGTCCTGATGAT GAACAGAACAATGATTGGCATGAAAAGAGAAGAAAACATTGTTATCACGGGCGAAACGACTAACACTAACAAGATTTTTA GTTATAGAAGGCACAAGAAGAAGCTTTTTAAGAATTAAACTAGCTGTAGGATTAAAAGAAGAAGGAAGAAGAGCTGAACC TATAGACTGAATTGGCAGTCCCTGACCATTGCCCACCAAAAGCTGTTCTTGTGATGAAGATGGAACATGATCCACAAAAA TGCCTGGATTATTAGTCACATGGTGTGTAGCTCCAGAATCAGGGCACCAAGTCACAGGTGAAGAGTGGTGTGCAGGAACA GTAGCTAACATAGCTTGAGGATGCATTCCAGTAGAGACCTGCTGCTGTGGTGGTCTAGGAAACTGAGGAGTTTGAGCAGT AGGTGCTGGAAACTGCCCCTGAGGAAGCCAAGGTCGAACAAAGGACATGCCAGCAGCTTGCATACCTTGCATATCAGTAG CATGTGAATAAGGAGTTGGTGGAATACACCAAGGTGACCATGGAGGCATGCTAGACGGTGAAAGAACACTAGAACCATAC TGAGGAAGCATTGAATTGTATGGAGCATAAGGTGGAAACCCAAAATTGGCCATAGAGGGAAAACCCCCAAATTGCATTGG GGAAAACCCTAAATTGACTCCAGGAACAGAGAAATTGGAACCAGAATTCCCAGATTGTGCAGAATTAGCACTGGAATTAG CATTGGAACTAACTCCTGAGGGACGCGACCAACAAGATGCAGCGTCATGGCCCCATTTACTGCAGTAGGTGCATTGGACA TTGCGTCCTCTCCCGCGACCACGCCCTCTGCCATAACCACCAGAATTGCGATTTTGTTCATCGCGATTTCCATATCCTGA GTCAACCGCAGTATCGACTGGCTGAGAGGGAGCGACACTGGTAGCAGGAGGTTGCGCCATCGTTGACGATGGTGCCGGAG CGGGCTGAGTCCACATAGCTTGTGGCGGCGGCGGCGCCGGAGCAGTGGAAGAAGAAGGTGAATTCTGCGCCTGTGCAAGA AACACCGCAGAAGTAGTGTCTGCGAGTTGTTTCTTCCTCATCCTGTCGAATCGCGCTTCATGCGAAATCACCATAGCTTC CACTTCTGAGATCGTGAAGTAGGTTGTTTGGTTGTAGATAACCGTCATCAAAGCACTGTATTCTTCAGAGAGTCCATCAA AAATTGCTTCTAGATGATCACGAAAGGTAACAGGTTCTCCAATCGAAGCAAGAGTATTCACAATCGTCTTGATTCGTTGC AGAAATTCAGAAGCAGTTTTTGTACCTTTTGTGATGTTCTTCAGTTCATTCCGCAACTGTGTTGACTGAGCTCTTGATTT GGCATTGAAAAACGAGTGGATTTCTTCCCAAACTTGATAGGAATGCACACATTGAATCACATTTGGAAGAATTGCAGGCG AAAGAGTAGAAAGAAGCCAGGTAAAGAGAAGAGAATCCTGTTGCTCCCAATCTGCAAACAGAGGATTCACATTTTCTGTG ATTTTGTCTTCTTCAGTCAAGAATTTCTCAGGAATCATCGGTGGATCTTGCACAAATTTCTGAAGTTTGTGTGATCTGAT GACTCCTTCCACTTGTTGTTTCCATGAATAGAAATTGGAATCATCAAGTTTGATGCTGAGCTTGTGCGAGAAAGCTTGAG AGAGAGAGCTTGAGGAAGAAGAAGAAGGCATAGAAGGTGATGAAGAATCCATAGCCATGGATCTTAGGCTCTTGATACCA TGATAGAAGAATCAGAGAAAAGAAAAAGAATTTGCATCTGAATATTTCACTATGATAAAACTGAATTGTACAATGAGAGA TTGAATCCTTATATAGGATGCAGTGGCTTGTTGAACAAGCTAACTGAACAGTAACTTCCTCTAACAGAAAGATAACTGAC TCTAACAAACTTGACAGCTGTATACAGCTGTTACTAACAGAAATTTCAGTTGTGTCCAGCTGGCATTCCAGCTGGCACAC ACTTACACATTGAAACCGATATTTTCATATCAACAATATACCTATACTCTCTAATATAGTGAACTGCCTCTGGATTCCCC TGAGCCAATATAGTTTGGCCAGACAGGATTTTTTATTATTATTTTGCTTCTGCGTGTGTCTTTAATGGCTCTCTCATTCT TACTTCTAGCATACATCAATGTGAATAAGACTTTAGATTTGTGTTGATGATATATCTTGCCTTTGTGTTAGATCAATGTT ATATCAATCTTCCTTTGTTTGCACCAAAGGGAAGGTGCTGATATAACTTTAATAACAGAGCAGAACAAATTTAATTGCTT AGTTGAATGAACATTAAACTTTTTAAGTTTTAACGAGATATATCTGGTTTGTTGCCAGATCAGTATTTCAGATACAGACA AGGAAAAGCTGCCACATGTTTTGAGATGGATGGACTACATCCAGGTATTGCTTCACCTTAAGCATGCTATGATTATATCT GTTTATGTTTTAGAGATTACTACATTGCCACTTAGTCATACACGATATTCCTTGATGAACAGTGCTTGTTTTATTTTCAT CTTTTCATTTATACTACTAAAGGAAAAGTTCAAAAGCTAACTATATCTTTAAGTAGTACGAAAGTAGATCAATGGGCCTT GATATTTGATAGTTGATAATAAAAACTGGTTGATGCCTTCTTTTGATGTGATAGGAAATGGTTAAAAATCATGTTTTCTG CAATCTGAATCTTACTTAATCTGTACTTGTTTAATTCCACAACGGGCACCCATGAACCCAAGTCCATCCGAACATTTTCT GTTTCAGCCTATGACATATTTGCTAGGCAGAGATAAGGTAATCTGATGATTGAGTACCCTCTGTTTATTACCGAGGAGAC ACCTTCTCTACTGTATGCATATGAGTGTTTGCATTTCCTTGCTGACAATTTCATTCTGATGCGAGCTTGATCATCTAGGA CGTCAAGGCTGCAGCTCTAAATGGTTGAGATCCTTGCATGAAATTAATTTGATTTCTTAACAGTTTTATAAGCAGTATGT TAATTAGCAAGTTGACTAAATAATCAGCATGTGTTTATCCTATTCTCCTCCTCCTCCTCCTCCTCCTCCATGTCATTGCA CTTTTGCCTAGCTATGTTAAACTTTCACTATATAAATATTATTTCATTTTTTTCTCACCTTTGTGGAAAAACCATTTATT AGTTGTTCTGATTGATTGTTTTGTCATCAGCACAAGCAGGAGCTTATAGGTTTATTCGAGGAAATATTGTTGCAGAAGCC TGATTTTGATCCCCCGGTGAGAAATCATACCCTTATTACTTCTAAAGTGTTTTCTTCATAGCTTAACAAAGATAAGCCCC AATGTCCACTGCCGGATTTTATTTTTAGGCATTGGTTTGCTCAATATTTTAGATAATATAGTAAAAATAAAAGTAGGTTA TGATGGTAGTTTTTCGTTTGTTTGATGTTTTAGATTTCAACAGTCCATTAAAGAACCAAATATCAATTATCTACAACAAA AATAGATTAAATTACCCTTTGGTCCTTGAAAATGTTATTTAATATGTTTTTGACGGGGTCCACTCTGTAAAGAATTTTCA TGGTGACTTGGTAGTTGACATGACCCAACTATTTGCTGATGTGGCATACATTCTCCATCTATTACTTGACTTAGTTTTGG GTGATTTTGGTCCCAATTGAAACAAAACTTGGTGTTGAAAGACCTGTTGAATTTGTGTGAGTGTGTTTTCATGGGCTAAG GAATAATCATGTGCTTTTTGGGAACTCACAAATCTCAATGTAATTTAACCTGAAACGTCTAGTATGCTAGTTATATTAGT TAAAATGTAGACACTGATAGGCCTAGTATTAAGTACTAGGTTTTAATGTAATATTTTGATGTAATCTGACTTGGTGCTTA GTTCCTGAAGTATATAGCTTTTGTCTTTTGGTTTGCAAATGCCACTCTATCTACTGCTATAAAATCTGAAAGTGTAACTA TAAAACCTTGAATTTGAAAGTGTGACTAGAAAACCTCAAATATCAACTACTTCTACAATTTAATGGCCTTCACTTTGTTG TTGAATGAAGTATCCTTTAAGAATTACAAAATCTCTTTAGAATGAATGGTGTTTTCATACCCGTCGACTTGTCTTCAGAA GTTATAATTTGCACCTTAAGACATGCATATAGGGATTTGTCAAGTTTAAGGTTAGTCCCTTACTTTTTTCAGTTTCCCCT CTTTTTGCAGGTAACAAAATCTATTGGAGCTGTGGAAGCTGATTCAAAAACTAACAAGACTGAGCAAAGCATAAAGAATA CAAACAAGCCAGAAGCAGACATAAGCAAGGATAAAAACAAAGCTGAGGTAAGTTGATCTTTTTCTTTTCGATAAGACCAG TGTTAATTCCTTTTATATAATGCTTTTATTTTTGTCCATAGGAGGAGAACCTTAGGTATTATGACATGACAGTATGCGGT TATGTGAGTGATACAAAGGCTTGTGGGGAAAAATGTAGGTTAGTCGGTGTTGTCCATGTTGGGTAGACAACTGTTATATT ACACCCATCTTGATCCTTATCTTTAGGTATGTTTAGTAATTTTATATTTTAAAATTTAACATCTTAGTCAAAATCCGACA ACAGTAGTTTTGTCGGTAAAATGACACAGTAAGAAACCAAGAACAGTAAATCAATTTAAAATCCTTATTTAGTTTCAGTC TGACAATTCTTGATGTAGAAGACTGGAAATGCTGGTGTGTGATAACATTCATTTATGAATTTCCTTCAAGGTTGGTATTT ATATGCACAGTCAGATATATGTTACTAGAGAAGATCGAGTTAGTTGTTGTACTTTTGTTATTTCAATTTAATACTGTTGC TTCACTCTGGATTTACTTTTAATTTCATTTGTTTTGAAAGATTAAGGAAAAGTCAACAGGAGACAAACAGCCTAGTAAAC CCAAGGCAAAATCTGCTGATAAAGAGGGGGCTGAGAAACAACCAAGTAAACCCAAGGCAAAATCTTCTGATAAAGAGGTG GCTGAGAAAGATAATGAAGTCAGTGTCAGTTTGCTTAATATTCAAGTTGGACTAATTCGCAAAGCTTGGAAGCATCCATC TGCAGATAGGTTCTTTCGCATATCTTTACGATAAAAATCTTTTATAATTAAACAGAATGTTAAGCTGGCAGTAAAAGAAT TGATACTTCTGTACTTTGATAACATGTTTAGCACCTGTTTAGATAAATATTGATATCAATGGACTTTAATGTTGCAGTTT GCTAGTTGAGGAGATAGATGTTGGGGAAGCCAAATTGCGGCAGGTAGTCAGTGGTTTGGCAAAGTATTGCACTCCTGATG ATTTGACGGTAATATAGTTACCTTATTAAGTGTGATGATTGGTTGTATTCATTTTGAATTGTAATAGACTCTTCCTTATG GTCGATCTGTTTGACTTTACTGCACAGAACCGACGTGTTGTACTCATTACTAATGTTAAGCCTGGAAAACTGCGGGATGT GATGTCTGAAGGACTGGTATTTGTTTTTATTTATCATGCTCATACTTATTACACAAGTTACATTGTTTTGCAGTATGTGT CTCATGGTTAAGTAGTCTTATTGGCTGTGTATGTATTTGGCTCCTCTTTCAGGTCTTGTGTGCTTCCAATGAAGGTCCCA CAGTTGTGGAGCCCTTGCTTCCTCCAGAAGGAGCTAAAATTGGGGAGCGAGTTACTTTTTCCGGGTATGCTATTCCAAAT TATTTTGACAAGGCAGTCAGACATGTATTTCCTACTTGAGTAGCTTGCTCAAATCCTCTAGATAAAGTATTTGAAGTGAG CATCACTATTCCATCCAACTATATCTTAGCTGGTAGCTCAGAAGTTCTTAGTTTCATGGTCTTCGACTAGTTCTAAACTA GGTTATTTTTAATTAGAAGTAGGTAACAGGCTAACCTAGTATGGACCAGCCCAACCTGATATGGGTTGTTAATAAATGAT CTTGGTGAGTTTGAATCCTGTTCTCACAATATGGGTCATTGAGCCATTTAGGCATGGAAACTTTTTTTTAATCGTTGAAC AAGAGAGCTAGTTTTAAAAGAGATTGGTTAGCAGGCTAGTTCTTTGGTTTGTTGTCCATAATGGACCTGGTTCTTAAAGT TGTGCTTAACAGGCCTGCAAAAATATCTGGTTCTAAACTGCATGGGATGCAGGTTGAATGGGAAAGCCCTTATTGAATAA TGACAATTTCTTTCCCTTTTTGATTGCCCATTGTCTTAAACGGGAGCAATTTACCTTGAATTATGTCGCAAAGTAGAAAG GAGACAGATTATGTTTACGAACCCATATAGTTTTGATATATCCTCTTTATAGTTTGCCAAATACCGTGTCACCTTGTAAT GTATACCTATACGCCATCGGGTCTGGAGAGTGGAGACATCACTTAATCATCATAATAAGCTCAATTTTCATTGTAAGGAT CACCTAGCCATCAGGAAAATTGAATTGTAGAAAACTAAGATAGAGAGAGGTCCCGTTTTAACGTATATCAATCCATTGAT TGACGAATGCGTTTTCATTATTACAAGTTACAACTGTGTAGCCCTTACTAGAAACTGCATATTATTAAAAAAAAATTGTC TTATTGTTTGTACTTGGATATAATTTGCTTGAGATAATCAGCTTTAGCTTATATTTGTCATTCTTTGAATTTAGGTTTGA TGGAAAGCCAGAAGATGTACTTAATCCAAAAAAGAAACAATTGGACAAGATTACACCGGTAATTTCTACCCACTTTGTTT TCATATTTCTCTCTTCTATTCGCATCATATCACCTATTATATCTCTCCGTTCTCTCCTGTTCCTATCTCTCTGGTTGTGG GGTGGAAATGTCATATTTTCCTTTTCAAACATCGTCATGTCAATATGTCATCATACTTGAAGTTATGATGTTCAGAAGCT CACGGGTTGTTTGTCCATGCAGTATCTTTTCACTGATGACAAAGGTGTGGCTACATTCAAGGGAATTCCATTTATGACTT CTGGTGGACCATGTACATCATCCATTTCCAGAGCAACTGTAAAATGAAGATGTGGCCCTTTCATTGCTGTTTTGACTACA CAGATTGTGTTGGTACCACAAAATATTTTGAGTTTTGAGCTTCGTAAATTCACATAACTATTTTGTTGCACCTGCTTTAC GTGGGTATTAAATGCTACAAATGCAACTAAGTGTCAAAAAGTAACTTTTTTGCATTGCAAAAGGAAACAAAGTGTTTAAA ATTATAGGAGTACTTACAATCTTTCAACTAACCAAGATTGTCTCTTATCTATTGGTCTTAAATTCCCGAATCTAATGACT CGATTTAATACTATGAAAAGAACTCAAGAATTAAAAATTTACACTAACCAAACTCGATGTGTGTTGTGACATGGACTTAC TAGCTACAATGGGACAAGTTACCCTCTAGCAACCCATAACTTCTAAACGAGTTACTACCATAACTAGAGACCTGATCTAT CAGATTGAGATTCATATGACAGATCTAGGAACCAAACTCAATATCAAC
CDS sequence (LotjaGi1g1v0306500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGCAGTTGATAGCAGAAAGAAATCGGTGGTTTTGGCTCTCTGCAAGCACCTTCAATTGGATTCTAGTGTTATTCC AGCTGATAATTTTGATAATGATATTAAGACTCTTTACTTGAACATCGCAGCAGCATCTGGACAGGAGGTTAATCACTCTG TTGAGGTGTTGAAGTGGGTGGCATTCGCAGAAGCCTTCCCTGTGGCCCTTGACGCAAGCTTTGAGAATCTCAAGAAATTA AATGACGAACTGTCTGATAAGTCTGTGCTCCTGGGTAATGGATTGAAACCCTCTGAAGCTGATGTTGTAGTGTTTTCAGT GATTCATTCTTCCCTGATCAGTATTTCAGATACAGACAAGGAAAAGCTGCCACATGTTTTGAGATGGATGGACTACATCC AGCACAAGCAGGAGCTTATAGGTTTATTCGAGGAAATATTGTTGCAGAAGCCTGATTTTGATCCCCCGGTAACAAAATCT ATTGGAGCTGTGGAAGCTGATTCAAAAACTAACAAGACTGAGCAAAGCATAAAGAATACAAACAAGCCAGAAGCAGACAT AAGCAAGGATAAAAACAAAGCTGAGATTAAGGAAAAGTCAACAGGAGACAAACAGCCTAGTAAACCCAAGGCAAAATCTG CTGATAAAGAGGGGGCTGAGAAACAACCAAGTAAACCCAAGGCAAAATCTTCTGATAAAGAGGTGGCTGAGAAAGATAAT GAAGTCAGTGTCAGTTTGCTTAATATTCAAGTTGGACTAATTCGCAAAGCTTGGAAGCATCCATCTGCAGATAGTTTGCT AGTTGAGGAGATAGATGTTGGGGAAGCCAAATTGCGGCAGGTAGTCAGTGGTTTGGCAAAGTATTGCACTCCTGATGATT TGACGAACCGACGTGTTGTACTCATTACTAATGTTAAGCCTGGAAAACTGCGGGATGTGATGTCTGAAGGACTGGTCTTG TGTGCTTCCAATGAAGGTCCCACAGTTGTGGAGCCCTTGCTTCCTCCAGAAGGAGCTAAAATTGGGGAGCGAGTTACTTT TTCCGGGTTTGATGGAAAGCCAGAAGATGTACTTAATCCAAAAAAGAAACAATTGGACAAGATTACACCGTATCTTTTCA CTGATGACAAAGGTGTGGCTACATTCAAGGGAATTCCATTTATGACTTCTGGTGGACCATGTACATCATCCATTTCCAGA GCAACTGTAAAATGA
Protein sequence (LotjaGi1g1v0306500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAAVDSRKKSVVLALCKHLQLDSSVIPADNFDNDIKTLYLNIAAASGQEVNHSVEVLKWVAFAEAFPVALDASFENLKKL NDELSDKSVLLGNGLKPSEADVVVFSVIHSSLISISDTDKEKLPHVLRWMDYIQHKQELIGLFEEILLQKPDFDPPVTKS IGAVEADSKTNKTEQSIKNTNKPEADISKDKNKAEIKEKSTGDKQPSKPKAKSADKEGAEKQPSKPKAKSSDKEVAEKDN EVSVSLLNIQVGLIRKAWKHPSADSLLVEEIDVGEAKLRQVVSGLAKYCTPDDLTNRRVVLITNVKPGKLRDVMSEGLVL CASNEGPTVVEPLLPPEGAKIGERVTFSGFDGKPEDVLNPKKKQLDKITPYLFTDDKGVATFKGIPFMTSGGPCTSSISR ATVK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 5 | 404 | 400 | 2.9E-179 | – | |
PANTHER | 5 | 404 | 400 | 2.9E-179 | – | |
Gene3D | 18 | 145 | 128 | 7.1E-14 | – | |
ProSiteProfiles | 33 | 157 | 125 | 9.939 | ||
SUPERFAMILY | 51 | 139 | 89 | 6.5E-19 | ||
CDD | 51 | 148 | 98 | 1.69048E-32 | – | |
MobiDBLite | 159 | 239 | 81 | - | – | |
MobiDBLite | 164 | 182 | 19 | - | – | |
MobiDBLite | 183 | 239 | 57 | - | – | |
Gene3D | 238 | 403 | 166 | 1.8E-52 | – | |
SUPERFAMILY | 242 | 395 | 154 | 3.67E-42 | ||
CDD | 242 | 346 | 105 | 2.30386E-53 | – | |
ProSiteProfiles | 243 | 346 | 104 | 29.518 | ||
Pfam | 249 | 343 | 95 | 3.1E-24 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | TRNA binding | Interacting selectively and non-covalently with transfer RNA. |
Expression pattern of LotjaGi1g1v0306500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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