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IPR002547

Source: InterPro

Description

IPR002547 is a tRNA-binding domain.

<p>This domain is found in prokaryotic methionyl-tRNA synthetases, prokaryotic phenylalanyl tRNA synthetases, the yeast GU4 nucleic-binding protein (G4p1 or p42, ARC1) [[cite:PUB00001293]], human tyrosyl-tRNA synthetase [[cite:PUB00002992]], endothelial-monocyte activating polypeptide II and export-related chaperon CsaA [[cite:PUB00017744]]. G4p1 binds specifically to tRNA form a complex with methionyl-tRNA synthetases [[cite:PUB00001293]]. In human tyrosyl-tRNA synthetase, this domain may direct tRNA to the active site of the enzyme [[cite:PUB00001293]]. This domain may perform a common function in tRNA aminoacylation [[cite:PUB00002992]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0000049
Molecular function TRNA binding Interacting selectively and non-covalently with transfer RNA.
Subterm of

Associated Lotus transcripts 7

Transcript Name Description Predicted domains Domain count
Lj1g3v1147490.1
– PREDICTED: probable methionyl-tRNA synthetase-like [Glycine max] gi|356516237|ref|XP_003526802.1|
Domains
16
Lj3g3v3627890.1
– PREDICTED: probable methionyl-tRNA synthetase-like [Glycine max] gi|356543424|ref|XP_003540160.1|
Domains
30
Lj4g3v1218370.1
– PREDICTED: tyrosine--tRNA ligase, cytoplasmic-like [Cicer arietinum] gi|502165730|ref|XP_004513672.1|
Domains
9
LotjaGi1g1v0306500.1
– Methionine-tRNA ligase, putative; TAIR: AT2G40660.1 Nucleic acid-binding, OB-fold-like protein; Swiss-Prot: sp|Q9SVN5|SYMC_ARATH Methionine--tRNA ligase, cytoplasmic; TrEMBL-Plants: tr|I1KB73|I1KB73_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0306500
Domains
16
LotjaGi3g1v0538600.1
– Methionine-tRNA ligase, putative; TAIR: AT4G13780.1 methionine-tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS; Swiss-Prot: sp|Q9ZTS1|SYM_ORYSJ Probable methionine--tRNA ligase; TrEMBL-Plants: tr|A0A0B2SPF8|A0A0B2SPF8_GLYSO Putative methionine--tRNA ligase; Found in the gene: LotjaGi3g1v0538600
Domains
32
LotjaGi3g1v0548700.1
– Methionine-tRNA ligase, putative; TAIR: AT3G59980.1 Nucleic acid-binding, OB-fold-like protein; Swiss-Prot: sp|Q9ZTS1|SYM_ORYSJ Probable methionine--tRNA ligase; TrEMBL-Plants: tr|I3SGE2|I3SGE2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0548700
Domains
11
LotjaGi3g1v0548700.2
– Methionine--tRNA ligase; TAIR: AT3G59980.1 Nucleic acid-binding, OB-fold-like protein; Swiss-Prot: sp|P31230|AIMP1_MOUSE Aminoacyl tRNA synthase complex-interacting multifunctional protein 1; TrEMBL-Plants: tr|I3SGE2|I3SGE2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0548700
Domains
10

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
cd02799 CDD 1 14.29