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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0311300 |
| Transcript ID | LotjaGi1g1v0311300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Arm repeat protein interacting with abf2; TAIR: AT5G19330.1 ARM repeat protein interacting with ABF2; Swiss-Prot: sp|B9DHT4|ARIA_ARATH ARM REPEAT PROTEIN INTERACTING WITH ABF2; TrEMBL-Plants: tr|A0A068U5R7|A0A068U5R7_COFCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0311300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:75518364..75522768) extracted from Lotus japonicus Gifu genome v1.2.
TCTATTCGTTTTTACTTTGCTTGCCACCTTATAGAAAATAGATATCCCTCTCAAATCTGCCTCCTTTCCTCCTCTTATCC CAATTGTTCTGCTCATTCTTGTAGTAATTGGGTTTTAGCAATTTGTGCTGCCTTTTCCAAAAAAAAAAAACACACCATGG ATCAGGATCACACTGCAGTCCGAAACTTAAAGCGTAAACAAGAAGAATGCAATAATAATACACAGCTGATAGATTCTCAA CGAGATCAAACCGACAAAATTTTCCAACAGATTCTTGTCCTCAAATCCGCTGCTTCATCCTCTCTCTCAGATCGTGCTAC CCGTGCTACCGCAAAAACTGCCCTAAACGTGCTTTCTGAACTTGCTAGAGACGGTACTGGTTCTACTCTAAACTCTCTTG TCCTATTTTTTTTTCTTTGCTCGAATTGTTCTTTACGTTATTTCCGTTTTATTCTCATGTAGAGGGACTTGTGGATACTA TAATGAACTTTGACGTCGAAGTTCCGGATGGCTTGCAGATCGGATTCGTTTTGCTCGTCGGCCTTCTGTCTTATAAAGTA ATTGATTTATTTTGTTATCTCTTTTATTCATGTTAAATTTTGCTTCATGTATTACATTCAAGATTATTTTGTTTGCACTT ATCTTTATCTTCAAACAGCCAGAGTACCAACAACCCATTGTTGATGCTGGAGTCCCGCCCTATCTTGTTGATTTCTTAAG GGTGCATAAAGCTGGTCTCATGTCTCAAACACTTGTTGGTCTTCTTATTATAATAGTAGACACAATAACTAATCTTGCTA GTACAAACATCAACACTATGAACCTTATCAGGTTGTCATTTGTTTCCATATGTTATAGACACATGCTGCAAATATTTTAT TATCTACTCTTACGTGATATGGATTGTTCAGGAATGAAGGTGGTATTCCACTTCTTGTTGAATTGCTTGAATTCAATGAT TCATGTGTGCAGAGGACAGCGGCAGGAGCCTTACGAACTCTTGCATTTGACAATGATGACAACACAAATCAAGTAGTTAA CTTTGCACTATGAGTTATTATTATATATTATTTAAACATAGTTGTTTACATGAATGAAAAATTACAGATTGTTGAATGCA ATGCGTTGCCCACTCTCGTATTGATGCTTCAATCAGAGGATCCTACTATACATTATGAGGCGGTCAGACACATAAGCGAA TTTCCATAATCCCTTATATTTGATTTTGCTGGCTACATAGCTCTAAGTTTTTAACACTAGTTGAATAACGGTTTTTGCAG ATAAGTGTAGTTAGAAGTCTGATCCACACTTCGCAGAATATTAAGGAAGTTGTTCTTGAAGTTGGCGCTTTACAACCGGT GATTTTGTTATTGAGGTAAAATTTCACATAACTCATTGTTTTCTCTGTATGCAATACAAGGAAAATGATGTGTTCCTCTA ACATGTTAGCTGCTTGCTGCAAATGAGCAATATATTTTCTCCCTAATTAATCTATGCAAGTTCATAATCTTAATCTCTGC GAGTTTGTGATTTTAATGATAGGTCCTCTTGTTTGAAGACCCAAAAAGTAGCAACTTCTTTACTTGGTGAATTTGCTACA TCATATTCGTGTTCCAAGGTGGATCAAGTTTTATGTTTTTCCAAAACGCAATAAATCTATCATTTGTAGAATTCTCTTAT TAATTTGCACACTCTGTGATTCATGCAGGCTCGGATTGCCCAAAGAGGGGCTATAAGACCTTTGGTTGACTTGCTTATGT CCTCAGATGAACTACTTTGTGCAATGTCAGCTTTTGTTCTTGGGATGTTAGCAGAGGTGATTAATACTAGCAGCAAATAT TTGGCCTTATGTCTGCTTAATTGAATCAAATCAATGAATACAAAGTGAAGTTGGGTAATTTTTTGGTGTATGTGGGAATT GATTTTTTAAACCTATTTCTTATTGCTTATATAATTCAACTGTTAGGACTCCGACAATCAAGTTGGTATTGCTTATAATG GAGGTATAGAGCCTCTGCTCAATCTTCTTGGCTCAAAGAATGAGTTTGTCCAACACTATGCAGCCTCCACTCTCTCTTTT GTCGCTTATAATGAGGTGGAGTCAATTTCCTTGTTCTTTAATTGGTCACAAACCCGCAGCGATATGCATCCACTGATTTT ATAGCTTTGTTTTATAGGACAATGTTGTAGATATTATTAAGGCTGGTGGTCTTCAAAAACTGCTCAATGGACATACTGAA GTATGTTCATTTATTCTCTTTTTTAGTTTAGTAATATTGCATTTGATTTACCATTATATCTACTTGATGGTTATTTTTTT TTATCAAGGTTTGCTAATAGAACTCATTTCCCTCACTAATTTATTAATTGGGTTGTTCTTATTACAGGCTTCTGATTATG TGTGTCGGTGTGTGGCAATGATATTAAAAAGATTAAAGGAGAACATTTATGGGAGAGTGAGTTTTCTAGCACATTATCAA ATTTCTATAGCTAGGGATTGATTATAATCGAATATGAGATTTGTAATCTATTTTAATACTTCTTTTTGCGGTACTTGATA TGAACATTATATCATTTCCTCTTTGGCAGGTACTGAAACATCTGTTGAATCTTATGCGCTTTGCAGACAAAGATGTTCAA AGACTTGTAGTTATTGCTCTTGCTCATTTATGTTCCCCTAATGATCATAAAACTATTTTCATTGTTAATAATGGTAATAA ACATAGATCTGTCCATTTTTGTCATTTCTCACTCACAATACTTGGAAAGTATTTTCATTTCGATAAGCTGCTAAATCTTC AGGACTAGAATTGCTTCTGGATCTTCTTGAATCTAAAAACCTAAAGCAGAAGAGTGATGCTTCAGCAGCGCTTCTCAAGT TATCTGCCAAAGCCACATTTGTCTCTATTGTTGATGCTGCTTCTCCATTACTATCATCCAAAGTATTTTACTATCATGTG CTTAAGATATCATGATTGCTTCAGTCACAATTGAAATTGAGTTGCTGATATTTAGTTGTTCATGTATGAAAGTGAACAAA ATGAGACATTTTTTTTCTCATTTTCTATCATTTACTGGTTATATTTTCTGTAGGTGTACTTGGACGAACAATATGTGAAC AATCCCAAACTATCTAATGTCACATTCTTAGTTGAAGGTGGAGAACCTGCTGCCAAGTTTTTCTGTTGCTTATATTTTCT ATAACTTTGTTTATACGCATATTGATTTTGATATATGGACTAATTTATTTTGTTTTCCTTTATTCAGGTAAAAGGTTTTA TGCTCATAGAGCTTGCTTGCAAGCTACTTCAGATGTATTTCACGCAATGTTTGATGGGGGTTATAAGGTAAGTTTTAATA AATCTTGAATCTTTGTTTTAACCCTCTTCGTTTTCTCTTTCATTTGGATGTGGCTCTGATGACTGGTCCTTCAATTTGCA ATTGAAGCAAGATGAATGGATTTGCCGAACTTAAGTGTAAATATCCAAAATAATTTCATAATATATGTGTAATGCAGGAA AGTGAAGCCAATGATATAGAGATTCCAAATATTAAATGGGATGTCTTTAGGATGATGATAAGGTATTGTGATGCAAAGTG CAATACTATTGTTCTATTTTTTTATAATAAGCTTAATATATGAACTGATTTTCTGTTGGACTTCAGATTTATTTACACCG GAACAGTAGATGTCAAATTGGATATTGCTAAGGACCTCCTCATAGCTGCAGATCAGTATCTTCTGGAAGATCTTAAGCAT CTTTGTGCACATGCAATTTCTCAAGTAAACCAAGAATTCAGTTCCATTGTTGCTTTATTTCTTCTATGCTTGTAGATTTT TCTTTTAGTTTGATTTAATCGAATTACTCTTGAAATTATTCTTACAGGATATTTATGTGGACAATGTTTCACTAATGTAC GATATGTCAGAGACTTACAATGCTACATCATTAAGAAACGCGTGCATACTGTTTGTCATGGAGCAATTTGATAAGTTGAG TGTCAAACCATGGTACGTATATTCTTTAAAACATGAACAATACTTTCATAATTCATTGTTTTATCAATTATATTTCTTTA TCCACTTGCTAAATAAGTAAATATGCAGGTATTGTAGCCTGGTTTGCCGCATTGCACCCAGCATACACAAATTTTTCTCA GATTTACTAACCAAGCCAGCTGATTCAGAGGACCATTGAGGATCCTTGATTTTTAAACATTGGAGAAGGTGAAAGATGTA AACATTTTAGTAAGAAATAGAATTACAAATCATTTCTGTGTAGCATTGAAATTGGCCTAAGACTCTGGTCGGTACTTTGG GATTTCCTATGTTAATAGGGTGTGTGTTGAAAGATTATTTCCAATCTAAACTTGTTAATTTTTTTTTTTTGAAAATGAAA GTAAT
CDS sequence (LotjaGi1g1v0311300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATCAGGATCACACTGCAGTCCGAAACTTAAAGCGTAAACAAGAAGAATGCAATAATAATACACAGCTGATAGATTC TCAACGAGATCAAACCGACAAAATTTTCCAACAGATTCTTGTCCTCAAATCCGCTGCTTCATCCTCTCTCTCAGATCGTG CTACCCGTGCTACCGCAAAAACTGCCCTAAACGTGCTTTCTGAACTTGCTAGAGACGAGGGACTTGTGGATACTATAATG AACTTTGACGTCGAAGTTCCGGATGGCTTGCAGATCGGATTCGTTTTGCTCGTCGGCCTTCTGTCTTATAAACCAGAGTA CCAACAACCCATTGTTGATGCTGGAGTCCCGCCCTATCTTGTTGATTTCTTAAGGGTGCATAAAGCTGGTCTCATGTCTC AAACACTTGTTGGTCTTCTTATTATAATAGTAGACACAATAACTAATCTTGCTAGTACAAACATCAACACTATGAACCTT ATCAGGAATGAAGGTGGTATTCCACTTCTTGTTGAATTGCTTGAATTCAATGATTCATGTGTGCAGAGGACAGCGGCAGG AGCCTTACGAACTCTTGCATTTGACAATGATGACAACACAAATCAAATTGTTGAATGCAATGCGTTGCCCACTCTCGTAT TGATGCTTCAATCAGAGGATCCTACTATACATTATGAGGCGATAAGTGTAGTTAGAAGTCTGATCCACACTTCGCAGAAT ATTAAGGAAGTTGTTCTTGAAGTTGGCGCTTTACAACCGGTGATTTTGTTATTGAGGTCCTCTTGTTTGAAGACCCAAAA AGTAGCAACTTCTTTACTTGGTGAATTTGCTACATCATATTCGTGTTCCAAGGCTCGGATTGCCCAAAGAGGGGCTATAA GACCTTTGGTTGACTTGCTTATGTCCTCAGATGAACTACTTTGTGCAATGTCAGCTTTTGTTCTTGGGATGTTAGCAGAG GACTCCGACAATCAAGTTGGTATTGCTTATAATGGAGGTATAGAGCCTCTGCTCAATCTTCTTGGCTCAAAGAATGAGTT TGTCCAACACTATGCAGCCTCCACTCTCTCTTTTGTCGCTTATAATGAGGACAATGTTGTAGATATTATTAAGGCTGGTG GTCTTCAAAAACTGCTCAATGGACATACTGAAGCTTCTGATTATGTGTGTCGGTGTGTGGCAATGATATTAAAAAGATTA AAGGAGAACATTTATGGGAGAGTACTGAAACATCTGTTGAATCTTATGCGCTTTGCAGACAAAGATGTTCAAAGACTTGT AGTTATTGCTCTTGCTCATTTATGTTCCCCTAATGATCATAAAACTATTTTCATTGTTAATAATGGACTAGAATTGCTTC TGGATCTTCTTGAATCTAAAAACCTAAAGCAGAAGAGTGATGCTTCAGCAGCGCTTCTCAAGTTATCTGCCAAAGCCACA TTTGTCTCTATTGTTGATGCTGCTTCTCCATTACTATCATCCAAAGTGTACTTGGACGAACAATATGTGAACAATCCCAA ACTATCTAATGTCACATTCTTAGTTGAAGGTAAAAGGTTTTATGCTCATAGAGCTTGCTTGCAAGCTACTTCAGATGTAT TTCACGCAATGTTTGATGGGGGTTATAAGGAAAGTGAAGCCAATGATATAGAGATTCCAAATATTAAATGGGATGTCTTT AGGATGATGATAAGATTTATTTACACCGGAACAGTAGATGTCAAATTGGATATTGCTAAGGACCTCCTCATAGCTGCAGA TCAGTATCTTCTGGAAGATCTTAAGCATCTTTGTGCACATGCAATTTCTCAAGATATTTATGTGGACAATGTTTCACTAA TGTACGATATGTCAGAGACTTACAATGCTACATCATTAAGAAACGCGTGCATACTGTTTGTCATGGAGCAATTTGATAAG TTGAGTGTCAAACCATGGTATTGTAGCCTGGTTTGCCGCATTGCACCCAGCATACACAAATTTTTCTCAGATTTACTAAC CAAGCCAGCTGATTCAGAGGACCATTGA
Protein sequence (LotjaGi1g1v0311300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDQDHTAVRNLKRKQEECNNNTQLIDSQRDQTDKIFQQILVLKSAASSSLSDRATRATAKTALNVLSELARDEGLVDTIM NFDVEVPDGLQIGFVLLVGLLSYKPEYQQPIVDAGVPPYLVDFLRVHKAGLMSQTLVGLLIIIVDTITNLASTNINTMNL IRNEGGIPLLVELLEFNDSCVQRTAAGALRTLAFDNDDNTNQIVECNALPTLVLMLQSEDPTIHYEAISVVRSLIHTSQN IKEVVLEVGALQPVILLLRSSCLKTQKVATSLLGEFATSYSCSKARIAQRGAIRPLVDLLMSSDELLCAMSAFVLGMLAE DSDNQVGIAYNGGIEPLLNLLGSKNEFVQHYAASTLSFVAYNEDNVVDIIKAGGLQKLLNGHTEASDYVCRCVAMILKRL KENIYGRVLKHLLNLMRFADKDVQRLVVIALAHLCSPNDHKTIFIVNNGLELLLDLLESKNLKQKSDASAALLKLSAKAT FVSIVDAASPLLSSKVYLDEQYVNNPKLSNVTFLVEGKRFYAHRACLQATSDVFHAMFDGGYKESEANDIEIPNIKWDVF RMMIRFIYTGTVDVKLDIAKDLLIAADQYLLEDLKHLCAHAISQDIYVDNVSLMYDMSETYNATSLRNACILFVMEQFDK LSVKPWYCSLVCRIAPSIHKFFSDLLTKPADSEDH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 669 | 669 | 6.2E-257 | – | |
| PANTHER | 1 | 669 | 669 | 6.2E-257 | – | |
| Coils | 11 | 31 | 21 | - | – | |
| Gene3D | 94 | 286 | 193 | 7.0E-35 | ||
| SMART | 104 | 152 | 49 | 2.9 | ||
| SUPERFAMILY | 142 | 492 | 351 | 2.48E-50 | ||
| SMART | 153 | 194 | 42 | 0.0086 | ||
| Pfam | 160 | 193 | 34 | 1.2E-4 | ||
| ProSiteProfiles | 165 | 199 | 35 | 11.567 | ||
| Pfam | 196 | 234 | 39 | 5.9E-5 | ||
| SMART | 196 | 236 | 41 | 6.4E-4 | ||
| ProSiteProfiles | 207 | 249 | 43 | 9.922 | ||
| SMART | 238 | 278 | 41 | 1.3 | ||
| SMART | 279 | 320 | 42 | 39.0 | ||
| Gene3D | 287 | 497 | 211 | 1.9E-28 | ||
| ProSiteProfiles | 291 | 333 | 43 | 8.732 | ||
| SMART | 321 | 361 | 41 | 5.3 | ||
| ProSiteProfiles | 332 | 374 | 43 | 10.972 | ||
| SMART | 397 | 436 | 40 | 180.0 | ||
| SMART | 437 | 477 | 41 | 29.0 | ||
| CDD | 496 | 611 | 116 | 2.38852E-60 | – | |
| Gene3D | 500 | 643 | 144 | 8.7E-43 | – | |
| SUPERFAMILY | 500 | 603 | 104 | 1.21E-28 | ||
| Pfam | 501 | 604 | 104 | 3.8E-25 | ||
| SMART | 509 | 606 | 98 | 4.3E-23 | ||
| ProSiteProfiles | 509 | 576 | 68 | 18.265 | ||
| CDD | 605 | 668 | 64 | 4.45431E-24 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0311300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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