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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0328300 |
| Transcript ID | LotjaGi1g1v0328300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Phosphatidylinositol transfer protein; TAIR: AT4G09160.1 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein; Swiss-Prot: sp|Q9M0R2|PATL5_ARATH Patellin-5; TrEMBL-Plants: tr|A0A072V1D5|A0A072V1D5_MEDTR Patellin-3 protein; Found in the gene: LotjaGi1g1v0328300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:78321174..78325356) extracted from Lotus japonicus Gifu genome v1.2.
GGTCTGGGTTGGAAAGAAAGAAAGAAAGAAAGGGACCGTTGTAGGCTTAAGAACTAGTTGGGCTCGGCAGTGGGTCCATG TTGTTTGGCATGAAGTCTAAATAGCACCGTTATCTCCGGGCCCGAGCCCGGGCCCACCTATTGGGCCCATCTTCCAATCT GGCACAGTCTGTTCCGCCCCACTCTTTATAACCTCTTCCCCACGAAACCCTCTTTCCCAAACCCCACTCTCTCTACGCCT TTTAAATTCAACTCAAACAAACAAACTGTTACTATCATTGAAATCCTTATTTTTCATCAACCATGGCTGAGCAAGTTCCC AACACACTGCCACTTGCGGAGGACCAAGTGGTAGTTACTGATGTCGCCGCCGCCGAACCTGCTGACAAGGAAACACAACA GCCCAAGCCCGAGGAGGAAAAGCCCGTGGAGGCTGAAACTGAGGTTTCTAAGCCCGGTGGTGGTGATGAAGTTCCGGAAT CTGGTTCGTTCAAGGAAGAGAGCAACATCGTTGCTGATTTACCTGATGCAGAGAGCAAAGCGCTGCAAGAGTTCAAACTT CTTGTTCAGACCGCGCTCAACAACCATGAATTCTCTGCGCCTGACAATCCGCCGCCGCAAGGGAGAAAAAATTCTGATGG CGCGGAAAACCAGCCAGATAAACCTTCAAAACCACCAGTTGCTGATGTTGCTGGAGAGCCTGCGCCACCACCGGAAGAGG AATCTGATGATGTCAAAGGCAGCGATGATGAACCTTCAAAACCACCACTTGCTGATGTTGGTAAAGCGACGGTGCCACCA CTGGAAGAAGAATCTGAGCCCGCCGCCGCCGCGGAAAAAGAAGAAGCAGAGGCTGTTGCAGGAGGAGAATCAGAAGTGAA GGAAACAACAACCAAGGTGGTGGCTGGTTCTGCTGTTGATGATGACGGAGCCAAAACGGTTGAAGCTATTGAAGAAACCG TTGTGGCTGTTGCTGCTGCTGCACCGGAAGAGGAAGCGAAGGTGGTGGAGGAGGAAGCTAAAGCTTCACCGGAGGAGGTC TCGATTTGGGGGATTCCGCTTCTTGCAGATGAAAGAAGCGACGTGATTCTGCTGAAGTTTCTGCGGGCCAGGGATTTTAA GGTGAAGGAGGCGTTTGCCATGATCAAGAGCACGATTCTGTGGAGGAAGGAGTTTGGAATTGATGGATTGCTAGAGGAAG ATTTGGGGGATGATTTGGAGAAAGCTGTGTACATGCATGGTTCTGATAAGGAAGGTCACCCTGTGTGTTACAACATCTAT GGGGAGTTTCAGGACAAGGAGCTTTACAAGAAAACTTTCTCTGATGAGGAGAAGAGGCAGAAGTTTCTGAGGTGGAGGAT TCAGTTCTTGGAGAAGAGTATCAGGAAGCTTGATTTCACTCCTGCTGGTATTTCCACCATTGTTCAGGTCAATGATCTTA AGAATTCTCCTGGACCTGCTAAATGGGAGCTTAGACAAGCAACCAAACAGGCCCTTCAATTGCTTCAGGATAATTACCCT GAATTTGTAGCCAAACAGGTACTAATACTATTACACTATGCAGTTAAACTGATTGTTGAATTGTTTGAATTGTTTCCTAT TCAGTTTTCATTTTCAACATTTAATGACTAACCAAAACTGTGTTTTTTCTTTTGGGGTGTTTGTTTTAGGTGTTTATCAA TGTGCCATGGTGGTACTTAGCAGTGAACAGGATGATAAGCCCTTTTCTCACACAGAGAACCAAAAGCAAGTTTGTCTTTG CAGGCCCTTCCAAATCAGCTGAGACCCTTCTAAGGTGAAGACACAAACTGAGAAAAGACTCAAAACTTTTTATCAATTTG CCTTGTCTTTGTAAAAGTTGAAGTATCTTAATTTGCCATCATGTTTCAGATACATAGCACCAGAGCAGCTACCAGTCAAG TATGGTGGACTAAGCAAAGATGGTGAATTCGGAGTAAACGATGCTGTGACTGAAATTACAGTGAGGCCAGCTGCAAAGCA CACCGTGGAATTTCCGGTTACTGAGGTAAGTTCGGTTTTTTCCTTTGTGGTTTTGTCGGGATTGTGATTGCTTTTTGACT GAGGATAGTAACAATGCAGCATTGGAATCTGTAGTCTTTCCTAGGATTCCTCTGTTCTCTAGACAAGATTTATATTACTG TCTTTTTCTCTTGTGTTCATTTCCTTTATTTTATGTTATAAACTGTGCACACATCACTTATGCCCTGAGATATCTTGAAA AATACACCATAAATTAGTAAATTAGGGATAATAAAATAAATATGGAAAGAAACATAGTACTTCAATTGGAAATATGAGAT GCTAATTTTTTTTAGTTCTAATTTCTAAATGTTGCTAACAGCCAAAATTCTTTTCTAGATAATTCTAGCTAAGTTGTCCT TTTCTACCATTTACCTATCCCAATATAATATTTCAGACCCAAAATCATAGTTGGAAGGAGCAAAAGCCAAGGAAAGTTGC TTTTCTCCATGATTTTGGTTTCACTTAACTTTTTCCAAACATGGTTTATTGTGGTTGAACTAATTATGGTTAGATATGTA ATTGAATTTGAATTTCCCTTTACTAAAGCTATTGGTCTCCAAAAGCTAAGAGAGGTTGCTTTTGTGGATCAAGATTAGAA ATGGAAACATTGGTCATTGTGTAATTGTGGTTAGATATGTAATTGAATTTCCCTCCACTATAGTTGTTCCATGATTTTGG TTAGAAGCTACGCGTCTTAGCTTCTCATTTAGTGTGCTTTGTATTGGCAAATTTAAGTTCAAACATATTAGGTGAGTAGA TTTGCCTTTGATATCCTTCTTTATATATTTCTAATGCATTGAAATTATGTTCTTGGGGATCTGCAGAACGGCTTACTCTC TTGGGAGCTCAGAGTAATAGGGTGGGATGTGAGCTATGGTGCAGAGTTTGTGCCAAGTGCAGAAGGAAGCTACACTGTGA TCATCCAGAAGGCTAGAAAGGTTGCTTCATCAGAAGAGCCAGTGCTTTGCCAAAACTATAAAATTGGTGAACCTGGGAAA GTGGTTCTCACCATTGACAATCAAAGCTCTAAGAAGAAGAAGCTCTTGTACCGGTTGAAGACCAAGCCAACTTCTGACTG AGATTCTCATCATTGGTAGTTCTGTCATGCACCCAAGATTTCAAAGCCATGAAGTTTTTGAAGTTTTAATTTTAATCATG AGTCCCAAGCATATATATACTCTTTTTGCTTTTCTTTAATATTTATTATTATTATTATTATTGGAGGGGATCTTTTCATT TTTGAATTCTTATTATTGATATATGGTATGCAAGATTTATATTACTCTATTCTTATGTATAAATTTCATGTGAATTTTGG TGGGGCCTTTTTATCTGTATGTTTGTCTATTTGTCTGTTATCAAGCTTAAAAATATGTTTGATGACTTTGATCTGTCATG ATCATGTTCTCAGCTGCAAAAGAAAAGATCAAATGAATATCTGTCATGGGCCTGAACTTCTAGAGTATATCACTATCGTG GTATGTGCGGTTACTCTTTGGCTCCAATGCAAACATAGATTAAATCTCACTTTGAGCAAAAAGTAAACGATATTTTCGTA TGAATTGAAATGAAAGCCGGTTCATAAAATACTTTACGGAGAAAGATCATTTCTACGAAGAGAAAGCTTCATTAGAGCTT GTTTTGAAAACTTACTCAGGAATCTATGTTTGGTCAATTCACATTTTCAGAAGCAAGAAATAATGACTTTTAAAGTCAAA TGGTCCAAATGTGAAACCAAACATCCACTTGGTTTATAAATCTCCACCGATGCAATCAAAAACTGATATTTTTTTCTCTG AGTTTATCCAAATCGTGCTCCTTAGATCAACATGTCTGCCATGACATGAGAATATGAGACCGCCACCATGTGTAAATTGG CAAGTATGAAGACATTCAAGGGCCCATGACATAATAATATGTCACTCACTTTTACTTTTTAGCACCAGATTCCATCATAA AACTGACTCATAACTCCGTGGTGTCTATCTTTTTAAATTTTATATGTTTTATGTACCTGTTTGCCCTCGTTTTTTCAAAC ACTTTTTTGAGTCTTTTAAGGCATCAAGAAACCATCATTCGGACCAGCGGGAGTTTGGCCCAGCAAAGTTGTTGAAATCT TTCTTTATTCAGGTGAATGCATA
CDS sequence (LotjaGi1g1v0328300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGAGCAAGTTCCCAACACACTGCCACTTGCGGAGGACCAAGTGGTAGTTACTGATGTCGCCGCCGCCGAACCTGC TGACAAGGAAACACAACAGCCCAAGCCCGAGGAGGAAAAGCCCGTGGAGGCTGAAACTGAGGTTTCTAAGCCCGGTGGTG GTGATGAAGTTCCGGAATCTGGTTCGTTCAAGGAAGAGAGCAACATCGTTGCTGATTTACCTGATGCAGAGAGCAAAGCG CTGCAAGAGTTCAAACTTCTTGTTCAGACCGCGCTCAACAACCATGAATTCTCTGCGCCTGACAATCCGCCGCCGCAAGG GAGAAAAAATTCTGATGGCGCGGAAAACCAGCCAGATAAACCTTCAAAACCACCAGTTGCTGATGTTGCTGGAGAGCCTG CGCCACCACCGGAAGAGGAATCTGATGATGTCAAAGGCAGCGATGATGAACCTTCAAAACCACCACTTGCTGATGTTGGT AAAGCGACGGTGCCACCACTGGAAGAAGAATCTGAGCCCGCCGCCGCCGCGGAAAAAGAAGAAGCAGAGGCTGTTGCAGG AGGAGAATCAGAAGTGAAGGAAACAACAACCAAGGTGGTGGCTGGTTCTGCTGTTGATGATGACGGAGCCAAAACGGTTG AAGCTATTGAAGAAACCGTTGTGGCTGTTGCTGCTGCTGCACCGGAAGAGGAAGCGAAGGTGGTGGAGGAGGAAGCTAAA GCTTCACCGGAGGAGGTCTCGATTTGGGGGATTCCGCTTCTTGCAGATGAAAGAAGCGACGTGATTCTGCTGAAGTTTCT GCGGGCCAGGGATTTTAAGGTGAAGGAGGCGTTTGCCATGATCAAGAGCACGATTCTGTGGAGGAAGGAGTTTGGAATTG ATGGATTGCTAGAGGAAGATTTGGGGGATGATTTGGAGAAAGCTGTGTACATGCATGGTTCTGATAAGGAAGGTCACCCT GTGTGTTACAACATCTATGGGGAGTTTCAGGACAAGGAGCTTTACAAGAAAACTTTCTCTGATGAGGAGAAGAGGCAGAA GTTTCTGAGGTGGAGGATTCAGTTCTTGGAGAAGAGTATCAGGAAGCTTGATTTCACTCCTGCTGGTATTTCCACCATTG TTCAGGTCAATGATCTTAAGAATTCTCCTGGACCTGCTAAATGGGAGCTTAGACAAGCAACCAAACAGGCCCTTCAATTG CTTCAGGATAATTACCCTGAATTTGTAGCCAAACAGGTGTTTATCAATGTGCCATGGTGGTACTTAGCAGTGAACAGGAT GATAAGCCCTTTTCTCACACAGAGAACCAAAAGCAAGTTTGTCTTTGCAGGCCCTTCCAAATCAGCTGAGACCCTTCTAA GATACATAGCACCAGAGCAGCTACCAGTCAAGTATGGTGGACTAAGCAAAGATGGTGAATTCGGAGTAAACGATGCTGTG ACTGAAATTACAGTGAGGCCAGCTGCAAAGCACACCGTGGAATTTCCGGTTACTGAGAACGGCTTACTCTCTTGGGAGCT CAGAGTAATAGGGTGGGATGTGAGCTATGGTGCAGAGTTTGTGCCAAGTGCAGAAGGAAGCTACACTGTGATCATCCAGA AGGCTAGAAAGGTTGCTTCATCAGAAGAGCCAGTGCTTTGCCAAAACTATAAAATTGGTGAACCTGGGAAAGTGGTTCTC ACCATTGACAATCAAAGCTCTAAGAAGAAGAAGCTCTTGTACCGGTTGAAGACCAAGCCAACTTCTGACTGA
Protein sequence (LotjaGi1g1v0328300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAEQVPNTLPLAEDQVVVTDVAAAEPADKETQQPKPEEEKPVEAETEVSKPGGGDEVPESGSFKEESNIVADLPDAESKA LQEFKLLVQTALNNHEFSAPDNPPPQGRKNSDGAENQPDKPSKPPVADVAGEPAPPPEEESDDVKGSDDEPSKPPLADVG KATVPPLEEESEPAAAAEKEEAEAVAGGESEVKETTTKVVAGSAVDDDGAKTVEAIEETVVAVAAAAPEEEAKVVEEEAK ASPEEVSIWGIPLLADERSDVILLKFLRARDFKVKEAFAMIKSTILWRKEFGIDGLLEEDLGDDLEKAVYMHGSDKEGHP VCYNIYGEFQDKELYKKTFSDEEKRQKFLRWRIQFLEKSIRKLDFTPAGISTIVQVNDLKNSPGPAKWELRQATKQALQL LQDNYPEFVAKQVFINVPWWYLAVNRMISPFLTQRTKSKFVFAGPSKSAETLLRYIAPEQLPVKYGGLSKDGEFGVNDAV TEITVRPAAKHTVEFPVTENGLLSWELRVIGWDVSYGAEFVPSAEGSYTVIIQKARKVASSEEPVLCQNYKIGEPGKVVL TIDNQSSKKKKLLYRLKTKPTSD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 582 | 582 | 2.5E-272 | – | |
| PANTHER | 1 | 582 | 582 | 2.5E-272 | – | |
| MobiDBLite | 1 | 75 | 75 | - | – | |
| MobiDBLite | 30 | 52 | 23 | - | – | |
| MobiDBLite | 92 | 200 | 109 | - | – | |
| MobiDBLite | 138 | 155 | 18 | - | – | |
| Gene3D | 225 | 492 | 268 | 1.9E-64 | ||
| Pfam | 240 | 282 | 43 | 1.9E-9 | ||
| SUPERFAMILY | 258 | 300 | 43 | 9.29E-15 | ||
| SMART | 259 | 284 | 26 | 1.7E-7 | ||
| PRINTS | 262 | 284 | 23 | 9.0E-5 | – | |
| ProSiteProfiles | 298 | 473 | 176 | 19.789 | ||
| SMART | 303 | 470 | 168 | 5.6E-41 | ||
| CDD | 304 | 468 | 165 | 7.03092E-43 | ||
| Pfam | 307 | 467 | 161 | 4.7E-32 | ||
| SUPERFAMILY | 309 | 470 | 162 | 2.35E-40 | ||
| PRINTS | 425 | 444 | 20 | 9.0E-5 | – | |
| ProSiteProfiles | 477 | 578 | 102 | 10.153 | ||
| SUPERFAMILY | 478 | 577 | 100 | 2.62E-7 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0328300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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