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LotjaGi1g1v0436500.1

Overview

Field Value
Gene ID LotjaGi1g1v0436500
Transcript ID LotjaGi1g1v0436500.1
Lotus japonicus genome version Gifu v1.2
Description Kinase family protein; TAIR: AT1G76360.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q9SII6|PIX13_ARATH Probable serine/threonine-protein kinase PIX13; TrEMBL-Plants: tr|I3SUF8|I3SUF8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0436500
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:93108580..93112244) extracted from Lotus japonicus Gifu genome v1.2.

CACTAAGACAAATTCCGATGAATCCAATGACTATACTATAAACAAGAAATTAAAGTCAAGACTTATAGAGACAGGCATAG TCATAAATAAATCCATGGAAAAGGTCAAGAAGTCACTGTTCATCCATTTCGTATCATACATACATCTCTCTGCCTTTGAT ATTTCTTGACACTTTCTCCTCTCCTTCCTGGAACAATTCCCACAGCATAACATATAAACAAGTATGTGAGCTTCCAATTC CAAACTAGCTAGATAGACTTCACTTGTTTGGTTGGTTGCTGCAGCTATAGTTTTCTTCCCAGAATCATGGGAAATTGTTT GGCAAAACAAGGTGATGATGATCAGGTTAAGAAGAAGATTACTGCAGCCACCAATAAACCACGCACATCCCCTGCTACAG GTACTGTAATCACGATCACATGTGTGTATGTGTATATTCAAGTGTGCCCTTTATGTTTACTTATTTAAATCATTACAAAA TATGAATTAATATGAATGTTCAACTCACACACATATGTACATGTAGCTTAGTGAGATGAAATATTTGATTAATATGCGCT CCAGAACACCTGAAAATACAAAATGTTAGTATAAGAAACATAGGAAGTGGTAGCTAGCTATATCATCCACCTCTTCCTAC GTTTAATTTTGACTTATCAGCATTTTTTGCAACTTTCCTTCGTAGCACCCGTAGAATGTAGCATTATTCATGATGCTACT GCAGCACTAGAGGCACCTTGTACCGGGAAGATCGTGAAGCCGAATCTGAAAATGTTCCCATTGGATGATTTGAAAACTGC CACAAGAAACTTCAAACCAGACACGATTCTCGGAGAGGGTGGTTTTGGGCGTGTTTTCAAAGGATGGATCGATCCCAAGA CCTTCAAGCCCTCAAGAGTTGGTGTTGGAATCCCTGTTGCTGTCAAGAAATCTAGCTCTGACAGCCTCCAAGGTTTAGAA GAATGGCAGGTACGTTTGTTTCCTTCCTCTATCTGCCATTTTTTTTTTTGTTTAAACCATTTGTGTGTCCTATCTTGTTC AAGCCTAGTAGCTAGAGTCACTATGGACGGCAAAGCCAACATACCTGCTTAAGTTAGAAGCATCCCAACTCCAGTTGATT TATGCGTTTGGCAGTTCTTGTGTCATTGTTACTTTCAAGTTTCAATGTATATGTGACCAAAAAGAAAAAGACATGATTGA AGTTGGCACTAATTAATCTCATCCATTTAGAGTTTCATTTTAATCAACTTCTTCGATTTTCATTGCATAGTGTATATCTA TTTAAAGTGATTCTAGAAAGATTTCTTGCCGAATGCTGAATATACTATATAAGAAATTATAAATACATATTTAACATTAC TGGATTTGTCATTTGTGTATGGATGGATATTACTTATAGTACTGATAAACAATCAATGATATCTGATATATGACAGGTGC ATTTTTAATTAGTATAAGCCTAACAATATGAATGCGTGTGTAATTTGCTTAACATAGAGGGTAATGTATTTCAAAGCTTT AATAAATGTCAATTAAGAATCATGTGGAACAGAGTGAAGTGAAATTTTGTTAATTGAGCTAGCTAGTGCTTGACTCACTG TTTTACTGTTAGTTTGAATGGTTCAAATGAAGATTGGTTTTACAATGTTTTTGTGTGCCTGCAGAGTGAAGTGAAATTTT TGGGGAAGTTCTCTCATCCAAACCTGGTTAAACTACTAGGATACTGCTGGGAGGAAAGTTGTTTCTTGCTTGTGTATGAG TACATGCAGAAGGGGAGCTTGGAAAGCCACCTATTCAGAAGTAGGAAACTGCAGTAACTGTGTGTTGTGATTTGTGACAT TTAAGACTTTTTTGTCTATATGATAATATTGTTGTTGCAATTGCAGAAGAAGGTCCAGAACCCCTTTCTTGGGATATAAG GCTCAAGATAGCCATAGGAGCTGCTAGAGGCCTTGCTTTCTTGCACAATTCAGAAAAATCTGTCATCTACAGAGATTTCA AGTCCTCCAACATTTTACTTGATAGGGTATGTAATTAATGATGTTCAATTCTTTGAATAGAGACAACAATAACGTGTTTG GTTCTACGGTGAAATGCTTCAGAGTCCAAAGTTACTTGAGATTAGAAGCTACAAGTTTTAACTTCTAAATAAATGTGACT TGAATTCTGAGCAAGTTGTAAAACTCTTTGTCCAAGAGAATGTTCATCATTAACTGTGTAGCAATTTCTTGTTGCTATAA CTTTTCATGATTAGGATTTCAATGCAAAGCTTTCCGATTTTGGGTTGGCAAAGCTTGGCCCTATCAATGGAAGATCTCAC ATAACCACGCGGGTCATGGGCACCTATGGATATGCAGCCCCTGAGTACATGGCCACAGGTACACACCATACTTACTGTGA TTTTTCACCGTATATCTAAACATGCGCTAAATTGATTCCTTACACCTTTGATGTGTGTTTGAAATTGAAAAAGTCTATAG ATCATTGGTGGACTTGATAATTATTTTGTTGCAAAACTAGTTTGTTGACTTATTCATGAAGAATTCCTCAACAACAATGG AACTTTCAGAAAAGCTAGCATAGATAATGACTCATAAATATACATCTGAAATTGACAGGTCATCTCTACGTGAAAAGTGA CGTGTACGGATTTGGTGTGGTTCTGCTGGAAATATTAACGGGCCTAATAGCACTGGACAAAAACCGGCCCACGTATGAGC AGAATTTGGTGGGTTACGCGATGCCATCTCTAAGTGACAAAAAGAGTCTAAAAAAGATAATGGACCCAAAGATGGACCAA CAGTATTCAATAAAAGCAGCACTTCTAATAGCTCAGCTTATACTCACATGTTTGGAATCTGACCCAAAGAACAGGCCTTC TATGGAGGATGTTTTGAGTACCTTAGAGAAGGCCCAAAGCATCAAACATAAGCCCAAAGTGAAGAAAGCACTAAATAAGG AGCAGCCCAAACCAATTCATTACAGCAATGGTTACTCCAAATCAAGAACTCACTCCCCTCAATAGTAATCTACTATGTAC CACATGTGGTTTTCTTTTGTTAAGAATATGGTAGAATAGAAAGAACACACATCTAGACTATAGGACAGGACATTAGTGAC ATGCTAAGGAGATCAATAAAAGTTCACTCTTGCGTAGGTGCGCCAGATGATCTCTCTAAAGTTACCACAGGTCTTCTTTA ATTAACCATTATATGTTGTTAATTAGTAATACATGAGTTCCAATCCATCCCCTGAATTGCACTTTACTATATGTGCACAT ATAATTGTTATATTAGATGTAAACTCTCTTAGAATTAATGTTTAGATAGCTTATTTTGTCGCATGTGGCACAATTTTCTT TTTATTCACCTGATAAATGAAACAACAAAACAATTTAACACTTATTCATGTGTCTCCACTCCACTCAAAGCAATCCTTAT AGTTATAGATTAAGATAGGAATTTTTAGTCTATATAGAGGTATGGTAGACATTATGGTTTATTAAGTGCTCCACATAATC CTTCTAAAAGGCCACACCTGTACGCTCTTGGGCTATTTTCCAAGTCAGTCTCCCATTATTAAATAAGAAGGTTCTTATCT TTTGTGTGCATATTCTTGAATCTCTCAAGTATAAGAGTACTATTACTTGTCCAACTTTCCCAAAG
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0436500.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGGAAATTGTTTGGCAAAACAAGGTGATGATGATCAGGTTAAGAAGAAGATTACTGCAGCCACCAATAAACCACGCAC ATCCCCTGCTACAGCACCCGTAGAATGTAGCATTATTCATGATGCTACTGCAGCACTAGAGGCACCTTGTACCGGGAAGA TCGTGAAGCCGAATCTGAAAATGTTCCCATTGGATGATTTGAAAACTGCCACAAGAAACTTCAAACCAGACACGATTCTC GGAGAGGGTGGTTTTGGGCGTGTTTTCAAAGGATGGATCGATCCCAAGACCTTCAAGCCCTCAAGAGTTGGTGTTGGAAT CCCTGTTGCTGTCAAGAAATCTAGCTCTGACAGCCTCCAAGGTTTAGAAGAATGGCAGAGTGAAGTGAAATTTTTGGGGA AGTTCTCTCATCCAAACCTGGTTAAACTACTAGGATACTGCTGGGAGGAAAGTTGTTTCTTGCTTGTGTATGAGTACATG CAGAAGGGGAGCTTGGAAAGCCACCTATTCAGAAAAGAAGGTCCAGAACCCCTTTCTTGGGATATAAGGCTCAAGATAGC CATAGGAGCTGCTAGAGGCCTTGCTTTCTTGCACAATTCAGAAAAATCTGTCATCTACAGAGATTTCAAGTCCTCCAACA TTTTACTTGATAGGGATTTCAATGCAAAGCTTTCCGATTTTGGGTTGGCAAAGCTTGGCCCTATCAATGGAAGATCTCAC ATAACCACGCGGGTCATGGGCACCTATGGATATGCAGCCCCTGAGTACATGGCCACAGGTCATCTCTACGTGAAAAGTGA CGTGTACGGATTTGGTGTGGTTCTGCTGGAAATATTAACGGGCCTAATAGCACTGGACAAAAACCGGCCCACGTATGAGC AGAATTTGGTGGGTTACGCGATGCCATCTCTAAGTGACAAAAAGAGTCTAAAAAAGATAATGGACCCAAAGATGGACCAA CAGTATTCAATAAAAGCAGCACTTCTAATAGCTCAGCTTATACTCACATGTTTGGAATCTGACCCAAAGAACAGGCCTTC TATGGAGGATGTTTTGAGTACCTTAGAGAAGGCCCAAAGCATCAAACATAAGCCCAAAGTGAAGAAAGCACTAAATAAGG AGCAGCCCAAACCAATTCATTACAGCAATGGTTACTCCAAATCAAGAACTCACTCCCCTCAATAG
Download CDS Sequence

Protein sequence (LotjaGi1g1v0436500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MGNCLAKQGDDDQVKKKITAATNKPRTSPATAPVECSIIHDATAALEAPCTGKIVKPNLKMFPLDDLKTATRNFKPDTIL GEGGFGRVFKGWIDPKTFKPSRVGVGIPVAVKKSSSDSLQGLEEWQSEVKFLGKFSHPNLVKLLGYCWEESCFLLVYEYM QKGSLESHLFRKEGPEPLSWDIRLKIAIGAARGLAFLHNSEKSVIYRDFKSSNILLDRDFNAKLSDFGLAKLGPINGRSH ITTRVMGTYGYAAPEYMATGHLYVKSDVYGFGVVLLEILTGLIALDKNRPTYEQNLVGYAMPSLSDKKSLKKIMDPKMDQ QYSIKAALLIAQLILTCLESDPKNRPSMEDVLSTLEKAQSIKHKPKVKKALNKEQPKPIHYSNGYSKSRTHSPQ
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR45621:SF106
31 375 345 1.6E-196 –
PANTHER
PTHR45621
31 375 345 1.6E-196 –
Gene3D
G3DSA:3.30.200.20
38 159 122 4.5E-29 –
SUPERFAMILY
SSF56112
59 370 312 5.19E-78
IPR011009
ProSiteProfiles
PS50011
74 367 294 37.601
IPR000719
Pfam
PF07714
78 355 278 3.9E-45
IPR001245
ProSitePatterns
PS00107
80 113 34 -
IPR017441
CDD
cd14066
80 357 278 5.06186E-94 –
Gene3D
G3DSA:1.10.510.10
160 379 220 6.5E-59 –
ProSitePatterns
PS00108
204 216 13 -
IPR008271
MobiDBLite
mobidb-lite
345 394 50 - –
MobiDBLite
mobidb-lite
379 394 16 - –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0436500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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