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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0458400 |
| Transcript ID | LotjaGi1g1v0458400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Alpha-galactosidase; TAIR: AT5G08380.1 alpha-galactosidase 1; Swiss-Prot: sp|Q9FT97|AGAL1_ARATH Alpha-galactosidase 1; TrEMBL-Plants: tr|A0A072U1H6|A0A072U1H6_MEDTR Alpha-galactosidase; Found in the gene: LotjaGi1g1v0458400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:96181977..96186452) extracted from Lotus japonicus Gifu genome v1.2.
TTTTTTTTCTGCATTTCCTATCACATCACAAATTATACTACTCATTTCTCTCATGCTTATAAAAAAAAAAAAAAAAACTC AATTCTCCTCTTTAGGTAAGGTGGAGGTGGAAATTGTTTGTTAACATAACAATATTCTTTCACGGAGGATAATAAATTAA TAATGCAGTTTAATCATCAGAAAATATGAATAGTAACACGGGTTAATGACTAGTTAATCTAATCTTTCAATCATTCACAT GTACGACAAGTCAGACATATAAAATAATAAAAACACTTGAACCTTGGACTGAGGAACACAACAACAGTCTTCTGTTTTTG TATATAAAAGGATAAGGGACCCTCACTATACTCTCTCTCACTGAAAAGAGTGAACATAATCAATGGAGAGAAGGAGTAGA TGTGAGATGATGATGGTGATTCTGATGACCCTTTTGCATTTTTGGTTGGCATGTTGTGTCACTGCTTCATCATCAGGACC AAAGAATCTCAACAACATTGAGGAACAATTTAGAAGAAACCTACTTGCTAATGGCCTTGGCAGAACTCCTCCTATGGGGT ATGTATTGATGAATTTCTATTCACTATCACTCAATTCATTTTCTTTTTGAGAATTGGTGCTGTTTTTGTATGTGAACTCT CAGTCTTTCTTTGCTCACCACTCACAATACTTCTCATCAATGATTGTGTGATTATTGTTGAGAAGTCTTTGACCATAAGT TTTTATATATAAAGGGTGATCAAACCTAACTTTTGAGTAGAGTTAGGTATGATCCAAATTCCATGAGTTATACAGTAAAA ACTCTCTTTTTTCTTCTGCTTGCATGTTTCTTAGGACCACCCTAACTTGACATAGTAACAGTTAACCATTGTTTATTCCT GATTATTTTGAAATTTATGAACCAAGAGAGTAATTGAGATACTGATTTGCTTTTAATGAAATTTTGTTTGCATGCAGGTG GAACAGTTGGAATCACTTTAACTGTCAAATTAATGAGAAAATCATCAGAGAAACTGGTATTTGTCATCTTTAAATTTGTT TATGTTATGTGAATTTTGTATATATGATGATGAATTTATGAATTTATATAGCATTTGACTTTTATTGTTAGTTATTGGCA AAGATCCTTCCACTTGATCAAGAATTCACTTTGATTGTAACTGTTCTGCATTGATTTACAGCTGATGCCCTTATTTCTAC TGGTCTTTCCAAGCTTGGATACAACTATGTCAACATAGGTACATGAAAACACTTGTTTTTTTTATGTCTCTTACTTTTGT CACATTTTTATATACTTTGCTAAGTGTAATAGCCACAACCTTCTAACCTTCACTTACAATTTTTCAATTGGTGCAGATGA TTGTTGGGCTGAATTGAATCGCGATCATAAGGTATATGTCATGTTGTTTTTACGCAAATGTTAGAAGTTACGAGACGAAT TTTCATCTCCACTTCTAATTGGTTAATGTTCCTTTTTTTTTCTCTAAACATGAATGTGTATAAATACATATACATATATT ATTAAAATCCACATGCCCATTCTTGTATTTCTTGCTGTGTTTTACTCATACCATTTAGCACTGCTCTTGTTTTTATATGC CTTTTGCCATTTTCTTCTTGAATAACATGAAGTTCCTGCATTTTGTTTTTTCTTCCAAACATTGTCATAGGGTAATCTGG TGCCAAAGAAATCCACATTTCCTTCTGGCATCAAAGCTCTTGCAGATTATGTTCACAGCAAGGGTCTTAAGCTTGGAATT TATTCAGATGCAGGGTACATGCCAAATACCTAAACAAATTATTCCCATTTTTTCTCTTTCAATTCCTTACAACTAAGTTT CATGTTGTTCTATTTTGCAGGTATTTCACTTGTAGCAAGAAGATGCCTGGTTCACTGGGTCACGAGTTTCAAGATGCGAA GACTTTTGCATCATGGGTACTAAACATTGTTCTTTCTTGATCTTTTTCCTTTGCATCTACATATCAGTAGCTAAAGGTAT GATTATTTTGCTTGATTTACAGGGTATTGACTATTTGAAGTATGATAACTGTAACAATGATGGATCAAAACCGACTGTTA GGTAGTCAAATTGTGTTTTCTGTGATCAAATTGTATCGTTTTATATTCTACATTAATTGTTATACATGATTTTGAAAACC ATGGTCTTCTCGTATACAGATACCCAGTTATGACTCGGGCTTTAATGAAGGCAGGTCGTCCAATTTTCCACTCGCTATGT GAATGGTAATTTAGTTAGTTTTATTATTTCTTTGCTCCTCCATTTTTGGTCCTTCCCCTTTAATTACACTTGCATTGTTT TATAGGGGAGACATGCACCCAGCTTTATGGGGTGCTAAAGTAGGAAATAGCTGGAGAACTACAAATGATATTAATGATTC ATGGGAAAGGTATAAACTGAGTTTTGTAATTTGCTGGTACAAGTAGTTTTGAAATGCGAAGAAGTAGGGTGTGTAAACTT TGATCTGTAGCTAGCTTATAAACATAATTCTCTGGCAGCATGATTTCAAGGGCAGACATGAATGAAGTTTATGCTGATCT TGCAAGACCTGGTGGTTGGAATGGTTAGAATTTCATTAGCATAATATTCTGTGAAATACAATGAGTTTATGTTTGGATTT AATCTAATTATGATTATGATTCTCTATATACATTAAACATTCAAAATCAACAGATCCGGACATGCTTGAGGTGGGAAACG GAGGGATGACGAAAGATGAATATATTGTTCACTTCAGTTTATGGGCCATTTCCAAGGTTCTACATTCATTCTTTTGTGTT CCATGATTTATGTGACATCGTGTTTCATGGCTTCTTTTTTCTCATGAGAAGGTTTATTGTAGGCTCCTCTTCTTCTTGGT TGTGATGTTCGAAATGTGACTAAAGAGACTATGGAGATAGTCTCTAATAAGGAAGTTATTGCAGTTAACCAAGGTGATGC ACAATTATGGTCATTCTATGATTTCTTATTCATTGTAACATGCTACTGATATTGATATTAATATTCATCTCCTTCCATGT TAGATCCGCTTGGTGTACAAGCTAAGAAGGTTAGGATGGAAGGTGATCTTGAGGTAAGTTGCTTTTGAAACATAACACAT GATTTTGTGTGCGTTTGTGTAATCAAACTTAATTAAGCACTTATGGAAATAAACACTGATTGGATAAACACTTATTCATA GACTAATTTGATAAACTTATTGAAATAAGACAACTTATAGGTAGTGTGCTTATCAAGCTACTGCCCAAGGTAGCCCCTCC TACTTGACGACCTTCAGAGGTGGACAGCAGTCCAGCCTAAAAGCACATGCGATATGTGCGAATGAGAGGGACACATAACC CCCACGTAAATATCTGCCAATAACCCCATATCCATTAACCGATTGTTAAACTATTTAATGACCGGTTAATCGCATAGCAT AACTCCAAAACAGCTAAAAGTCCAAAGGGCAGTCTTAATCCTATAAGAAGCCTAAGACCGCAAGGATTAAAGCATGTTCA CTCAACACCAGACACTGGGAGCTAGACTATGTGCTTTTCACTGAGTTTAACCTCATAGTTTTGGAGAGAATAGATAGGTT ATAAGCTATTTAATTAAGCTCTCTCAAACACTTACATAATCACTCATGCTATTATATAAGCTCAAATCAACAATTTCAAA CTTGACTAGTGTCAAATGAATAGGAAATGATGATTGACATGTTTTTTGGACAGATTTGGGCAGGTCCTCTTTCAGGGTAC AAGGTAGCTCTTGTGTTGCTTAATAGAGGCCCTCAACAACGTCAATCCATTACAGCCAACTGGGATGACATTGGCATCCC CCCAAAAAGTGCTGTTGAAGCAAGAGACCTTTGGGAGGTAGACACATTCAATTTCTTTTGTTTTGTAGGATTGAGGTTGA GGGTGGTGTTTGCTGTTCTTTTCACCACTCTTTTTATGGATACTGATGCTGTAAAGTGTCTTCTAATGCATGCAGCACAA GACACTGAAGAGACCATTTGTGGATAAGTTGACTGCCACAGTGGATTCCCATGCTTGTAAAATGTATGTGCTGAAGCCAA TAGCTTGAGCTCTATAACACATTTGGAGCAGCTTTTCTTTTGTAGTTTGTGAACTTGTAGATCAGCTTCACTTCAATAAA CATTCTTCATGATCCTGCTTCTAATGATCATAGAAGTTTGCTGCCTTATTTTGGGCACCACCTCAATAAAGAATGCTTTT CTCTGTTCTTAACCCTCTAGACTTCCATTTTGTGAGTGGTGTGTTATAACGTTCCATGTCATTTTACTTTGAAACATGGA AAAGAAGTTGTCTCACTTATCACAAGGGTTAAATAATCATATCTGGAGTGGTGTAATAAGATAATTTACAACAGTTATCA TGATTAAATATGTTCTCTTAGGATGTACTTGTGTAATAGTTGGGGTACGTTAGACTACTCCCAAACAAAAATGGGC
CDS sequence (LotjaGi1g1v0458400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGAGAAGGAGTAGATGTGAGATGATGATGGTGATTCTGATGACCCTTTTGCATTTTTGGTTGGCATGTTGTGTCAC TGCTTCATCATCAGGACCAAAGAATCTCAACAACATTGAGGAACAATTTAGAAGAAACCTACTTGCTAATGGCCTTGGCA GAACTCCTCCTATGGGGTGGAACAGTTGGAATCACTTTAACTGTCAAATTAATGAGAAAATCATCAGAGAAACTGCTGAT GCCCTTATTTCTACTGGTCTTTCCAAGCTTGGATACAACTATGTCAACATAGATGATTGTTGGGCTGAATTGAATCGCGA TCATAAGGGTAATCTGGTGCCAAAGAAATCCACATTTCCTTCTGGCATCAAAGCTCTTGCAGATTATGTTCACAGCAAGG GTCTTAAGCTTGGAATTTATTCAGATGCAGGGTATTTCACTTGTAGCAAGAAGATGCCTGGTTCACTGGGTCACGAGTTT CAAGATGCGAAGACTTTTGCATCATGGGGTATTGACTATTTGAAGTATGATAACTGTAACAATGATGGATCAAAACCGAC TGTTAGATACCCAGTTATGACTCGGGCTTTAATGAAGGCAGGTCGTCCAATTTTCCACTCGCTATGTGAATGGGGAGACA TGCACCCAGCTTTATGGGGTGCTAAAGTAGGAAATAGCTGGAGAACTACAAATGATATTAATGATTCATGGGAAAGCATG ATTTCAAGGGCAGACATGAATGAAGTTTATGCTGATCTTGCAAGACCTGGTGGTTGGAATGATCCGGACATGCTTGAGGT GGGAAACGGAGGGATGACGAAAGATGAATATATTGTTCACTTCAGTTTATGGGCCATTTCCAAGGCTCCTCTTCTTCTTG GTTGTGATGTTCGAAATGTGACTAAAGAGACTATGGAGATAGTCTCTAATAAGGAAGTTATTGCAGTTAACCAAGATCCG CTTGGTGTACAAGCTAAGAAGGTTAGGATGGAAGGTGATCTTGAGATTTGGGCAGGTCCTCTTTCAGGGTACAAGGTAGC TCTTGTGTTGCTTAATAGAGGCCCTCAACAACGTCAATCCATTACAGCCAACTGGGATGACATTGGCATCCCCCCAAAAA GTGCTGTTGAAGCAAGAGACCTTTGGGAGCACAAGACACTGAAGAGACCATTTGTGGATAAGTTGACTGCCACAGTGGAT TCCCATGCTTGTAAAATGTATGTGCTGAAGCCAATAGCTTGA
Protein sequence (LotjaGi1g1v0458400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MERRSRCEMMMVILMTLLHFWLACCVTASSSGPKNLNNIEEQFRRNLLANGLGRTPPMGWNSWNHFNCQINEKIIRETAD ALISTGLSKLGYNYVNIDDCWAELNRDHKGNLVPKKSTFPSGIKALADYVHSKGLKLGIYSDAGYFTCSKKMPGSLGHEF QDAKTFASWGIDYLKYDNCNNDGSKPTVRYPVMTRALMKAGRPIFHSLCEWGDMHPALWGAKVGNSWRTTNDINDSWESM ISRADMNEVYADLARPGGWNDPDMLEVGNGGMTKDEYIVHFSLWAISKAPLLLGCDVRNVTKETMEIVSNKEVIAVNQDP LGVQAKKVRMEGDLEIWAGPLSGYKVALVLLNRGPQQRQSITANWDDIGIPPKSAVEARDLWEHKTLKRPFVDKLTATVD SHACKMYVLKPIA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 28 | 28 | - | – | |
| ProSiteProfiles | 1 | 24 | 24 | 7.0 | – | |
| SignalP_EUK | 1 | 23 | 23 | - | – | |
| Phobius | 1 | 11 | 11 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 28 | 28 | - | – | |
| Phobius | 12 | 23 | 12 | - | – | |
| Phobius | 24 | 28 | 5 | - | – | |
| Phobius | 29 | 413 | 385 | - | – | |
| PANTHER | 43 | 413 | 371 | 6.4E-202 | ||
| PANTHER | 43 | 413 | 371 | 6.4E-202 | – | |
| Gene3D | 48 | 321 | 274 | 2.2E-129 | ||
| SUPERFAMILY | 49 | 320 | 272 | 8.43E-104 | ||
| PRINTS | 50 | 69 | 20 | 2.1E-67 | ||
| Pfam | 55 | 319 | 265 | 1.7E-79 | ||
| CDD | 56 | 319 | 264 | 1.27067E-156 | ||
| PRINTS | 86 | 101 | 16 | 2.1E-67 | ||
| ProSitePatterns | 91 | 107 | 17 | - | ||
| PRINTS | 127 | 148 | 22 | 2.1E-67 | ||
| PRINTS | 162 | 179 | 18 | 2.1E-67 | ||
| PRINTS | 189 | 207 | 19 | 2.1E-67 | ||
| PRINTS | 254 | 273 | 20 | 2.1E-67 | ||
| PRINTS | 275 | 296 | 22 | 2.1E-67 | ||
| SUPERFAMILY | 321 | 412 | 92 | 1.12E-25 | – | |
| Gene3D | 322 | 412 | 91 | 2.0E-26 | ||
| Pfam | 331 | 409 | 79 | 3.6E-19 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. |
Expression pattern of LotjaGi1g1v0458400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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