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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0465600 |
| Transcript ID | LotjaGi1g1v0465600.1 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Calcium lipid binding protein, putative; TAIR: AT3G61050.1 Calcium-dependent lipid-binding (CaLB domain) family protein; Swiss-Prot: sp|A0JJX5|SYT4_ARATH Synaptotagmin-4; TrEMBL-Plants: tr|I1L6S3|I1L6S3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0465600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:97358757..97368268) extracted from Lotus japonicus Gifu genome v1.2.
GGTCCATATTAAATTCCAAAAAACGCAACCATGAAGGGTGATTGATGCTGAACGAGTTCAATAGTTTTCATTCATTCCAA TCTTGTGGAGCAAGAGACACAGAATCTCCATCAATTCCTCAATTTTGACGTTACAGACAACAAAAAGTTAACACTTTTGA AGCAAACAGAAAGAGAGAGAAACAGAGTGAGTCTCATAACTCATTTCTTTGAGTTGCATTGCACCTTTGTTGTGATCACC TTCCAAAATTTGGTTTTTCATTGACCCTTTAGGCTAATTTTCTCAAATCTCATTGTAAGTTTTAATCTTGGTTTGATTTG TGTGTTCTTTTGCTTGTTCATGATCTCAAATTCTGTTTTTTTTTTTTTTTTTTTTTTTTGCATAACCGTGGCGGTGTTGA TCTTTTTTTAATTTTTCCCATTCTTTTCTTGTGTTTTGTGTTGAAGGGGTGTCATCGGTGTTTGGAATCTGGGAAAATGG GGTTGTTTTTTGGGATTTTTCTGGGGGTAGTATTCGGCGTAGCATTGATGGCTGGTTGGGAGCGCATGATGAGGTACCGG AGTGCCAAGCGAATTGCAAAGGTATGGTGGTTTGAGCTGTTTTTCTTGAATTTGGTTGTGTTGATCAATGTATTGGGAAT TGTCTTGATCAATGTTTTGGAAATGTTATGCATTTGTTTGGAATGTGTAATGTTGAAGAAAAGTTGATGAATTGAAATGT GATAAGTGGGTAATGTGGAACAAAACAACCATTAGCCTTCTAATGCAGTTTTGATTTTTATGTGACTTTGGGTTCAGATT CTTGAAAAAAGTATGCTGAAACAAGGCTTGAAAAATGAATGCTGGGGGAAAAATACAGAGTGTGCTTTTTTTAAGCAATT GGTTTTGTTAGAAATAATAAGGACACACTTCATAGATGAAGATTTGAGAACATATCATACAGGAAGTCTTATGTATAAGT TACCTTGGATCCATCATACACAATATTGAGGAGATATAGAGAAATGCTTTGGGTGTGATTTGTGATAGAAAGATTTCATT CACTTTAAAGGAAAATTTTACCATAGCTTTAAGACTTGCAGTATTGTATGAAACTAAAGTTAAGCAGTGACACTTATTTA GGCTATGCCTATTTACCCAAAAGATAGTTTACGGGTAAGGATTGCTCTACCCATTATAAATACCTATTTAACCATATCTC TAGTCAATGTGAGACCATAACAGTTAACACTCCCACGCTGTCCTAAAATAATCACAGGCTAGATTGTTTTTGTTATTTTT TCTTAGAGCAGCCGTGGGTGAGGTTGATTCTTGAACTTTAAACTTCAGCAGGTGGCCAGCATGAGCCCAATAACGAATTT AGGATTGAGTCAGATACCATGTTGAGAATTTTAGCTTTGCCTAACTATACCCCAAAAGCTAGCTTAGGGGTGAGCACTGC CCTTCCTTTTATAAGTTTCATTTCTGTAGTCAATGTAGGACCTTAACACGTTGTGATGGGCGCATGTGTTCTGTCTGTGC TGTCATATACTTTTTGCCTTCTTGAATCCTGCATTGAGGAACTCTGAAGAGAATTTTGGTATTGCCATAATTGGAGTCAC TAATGGTAGTGGAACAAATGGTATAACGTACTCTGTAATGGTAATAGTCCATAGTTAGATGAAGTATGAATGCATAAATG TAACTATAAAACTGTACAGTAGTCTATTACCAGATGTTATAGTGGAGTTTGATGGGAAAATAGAAATCTGTAACCTTTGC TTGTTGAATAAGATCTAACACTGTTGGCTCTATTCAATGAGTTCAAAGCTTAAAGATAGGAACTAGAAAAAAGAAAACAC AGATTCATTGGAAATTGAATGATTAGGGTAATTTATTAATAATAAGAAAAGCAGGCAAGATGAACAATCTCCACTGAGAT GTTGCCAAGAACACAGCTCATTACAGAGAGATACTCTCCCTCACAAATGGCCATATCCACTCACTCCAAACCACAGGATA CCCGCACACGGTAACTAACTCACCCACCACACTCCATGGACCCCACCCGCATAACAAACTTCCCACTTACAGCATGTGTC TTAGGACTCATTTGAGCCTCCTCTTGTAAATCTACAATATCTTAGGTCCTTATATCAATTGTTCAATGGGTTCAAGGCTT GGGTCCCGATCACTTATATAATTTATCTGTTTGTGTCTTTGAACCCTTTCCCTGTGCCTGTGGACTTCAGCATGGTGTCT GGACTCTGGATCCTGTATACTATACTGATTAACCACAGCACTGGATGAAGACAACAAAAATAGGCTTAAGAGGAGAATGA AAAAAGAAGGCATTGTATTTGTATTGTACCCTTATCTTAACAATATTCATTTTTCTCTGCAGGCGGTTGATGTTAAACTC CTTGGGTCCCTTAACAGAGATGATCTAAAGAAAATTTGTGGTGAAAATTTTCCTGAATGGATATCTTTTCCTGTATATGA GCAGGTGGGATTCTCATCTGTTACTGTAATACTTAGCTTTCTACTGAAATGATTTAACAAAACGCTCCAATTATTCCAGT ATTATATTATTGGCAAGCCAAGTTAAAATTTGAAACTCCTTTTTTGTTTCCTAGTTCATATACTCTTTATGTTTTCTTTG AATGATCCTTCCTTGCATGGGTTTTTTCAGGTGAAATGGCTAAATAAGCTGCTGTCCAAACTATGGCCATTTGTGGCAGA TGTGAGTAAACTTGCATGCATGTTTAATGTTTGTAGAATAATTATTAAACAACAGCAGCTTGTGTCATGTTGTTCATTGA TTTCTTACTAAATTTATTTTCTAGGTTAAATCTTGATATTTCACTTGTTTCTGTTCTGTAGTATTTTATTTTACAAAACA TATTTTGTTCATAATATTGGTTCTAACCCCCCAGTTGTTCAGTTCGAATGAGAAAAAGAACAAACTGGATCTATTGATTA TGGAGAGATACTGAATTCAATATTCTTATTTGATAATCTAGTGTGGAATTTGGGGGAAGTTAGATGTATGAACTATGAAG CCTTACCCCAAGTTGAGAGGCTATTTCTGTGACTAGATTCAGTGACCCCTAGTTCTGTATGTTCCCTGCATCATTCACCT TGCTTTCCTTAGACATAAATCCTATTATGCTTAGGCTGTAGGAGACCTTTTTTTATTTGTTTTCCTTGCTAATATTCTTT TCCGAGGATTATTCCTACATTGCTTAAATAGCTGACTTATGTTCATATGGTTGTTTTTAATGTTTTAGGCAGCAACTTTG GTGATAAGAGAATCTGTTGAACCGTTATTAGAAGAGTACAGACCTCCTGGAATTACTTCATTGAAGTTCAGTAAGCTGTC TCTCGGAACTGTCGCTCCGAAAGTTGAAGGTATTAATCAGCAGTAATTCCTCTCTTCTTCCTTTTTCCTGCTAGGTCATT ATGGTATTGAGTGGTCTATATGTAGCCAACCCCACTTAGTGGGAATAAGGCTTTGATTGTTGTTGATGGTTGTTATTCTT TCCCAGCCAAATTTACTACTGTATCAGATAATGAGGTTGATTGTTAGAGTAACCAAAGTGTGACTCAAAGAAGTCCCACA TTGTATAAATAAACAACTGTACAATAGTATATAAGTTAAAGGACACACACACCCATTGCCTTAAGTGCCTTAAGGTTTTG TGGTGATATGGAATTATGGTTTTAACTTTATTCTAACATTTATTTATAACTGATATGTCATTCTATTTTGACAACAATTC TTCTTTTAAGCTGCTTCATATGTGACTATTTTCAGAAACAGATCATCTAAATATCTCAATTTTTCATTTCTATATATTTT TTCCCTTTCTTTGCCATTTAACTAATTATTCTCTGCCTTAAGAGAGAGAGAGGATCTTTATGCACTATGTTTTTCATTTT TTCTCCTTTTTCTCTCCTTGCAACTATTTTCTTTTTTCGAAAGCAAAATCTATTGATATATTGATGAGGAAATTGACAGG ATATACATCGAACTACTTTTTAGAGAGGTTGTCCCTCTCTTAGGCCTTATTTATATTAGCAGATTAAACTTTCTTTGTGG CTTCTTATTGGTACTCCTCTAATGGATGTTTGAGGTGATTTTTTTACTGATATCCAAAGAGATTGGACAGTTTTATTCAT CTTTCAGCCACTTTGACTTATTGTTTCCCACCCTCTCTCTGCATTAAGATTTGTTATCTTCTGCCTAATGTACATGCTTC ATTTTCTTTTATAATTATTTTCATTTTATTTCATTTTTCAAGTTTTGCGGAGGAGTCCATGTAAACATGTATCATGAACT AAAACCAATGCACAACTATATCTTAAAACTTCCAGCAGTTAAAATAAAAATCATCATCAATTGCAGTTAATAATATAAAG AAACCTCAGTCTTCTCTGAAGAAACACCTTCCCACCATCAAATCTTATTTGCCCTCATTTTATACTTTCTTGCTCTAGCA AGCAGCTGGTAAGCACAAATCCATATCTTGATGTGTCAGAGCCAAGTTGAAAACTTGTTTGAGCAAACGAATTTTATCTT TGTAGAAAATATCATTTTTATTTGCTATAGTTGCATTGGTGCATGAAATATGCTGGACCCAACACTTCATTCGTGATGAC TAGTGACTAGTGAGGGATTGTTAGCACGAAAATTTGAGATTTGCGAACTGTTTTTTAATTGACGTAAAGAATGGAGGCCA GGAATGACCAGTCTTATACTAGTGCTAAAATGTTCAGGGTGAGGTCCAAGGTCATGGCATGCTAGAAGCTTGAATTAGTG CTTAAACTGGTACTTACAACTGATCTACCTAACAAGGAGTCAAACCGAAATATTCATACCCAAAAGCAACACATATTGTC CATAATCTCTTTTCAAAAACAGGGAAAGAAGCAACTATCGTGAGATTCAAGATTTAATATGTCTTGAATCGAAGTTAATT AGATGAAATGGATAAATCAACTTTGAAGTTTTTGCAGGTTTAGAATAAATCAAAATATTTAAGTTGTGTGTGCCATATGC AACATAAGCTTTATAACAATAATTTTATAAGTTAGAATCTACGTATATTGTATTTATGAAAAATGAGCACATAGTTGATG AGATTGTTATTAAGATGTTTGACTTATGCATGTTAGCAATATTCAGACCAAACAAAATGTTATCAAATGCAATTTTTATT CCACCTTTGTTTTTTCTTCCATTATCAATATCTCCGTCGAGTCATTTTTGTATATCAAGAAATAATGCATGCATAGTTTC TTCATCCATTCAGGTATTCGTGTTCAGAGTCTTAACAAAGGTCAAATCATAATGGACATTGATTTCCGTTGGGGTGGTGA TCCCAATATTGTTTTGGGTGTTGAAGCAGCACTTGTTGCATCAATCCCTATTCAGGTTAGACTGAGCAGAATTATTCTAT GTTGAATTTCATGTTCCTTTGCTAAATTTCTAAATCTTGAGTGTTATTGGTTTTTGCTTCAGTTGAAGGATCTCCAGGTT TTCAGCATTATCCGTGTTATATTCCAACTTGCTGAAGAGATCCCCTGCATTTCTGCTGTTGTTGTTGCCCTACTTGCAGA GGTAACCATTGAAGGGTGATGTTCTACTAAATTTCTTAATATTCATTTGCAGTTTCGTATGTGCAAACCCTTTTGCATGC TCTTGCAAATCAAGCTAAAATCATTGGTAGACCATTGACCTTAAGCATGTTTCCACTTCATGATTGTGTGGCATTAGTTA CTTTTTTTCTTTAAGAAGAAATTGACGTGAGAATTAAATTTGTTGGTTAAACAAACTGAAATTTTTGATAATTGATCCCT TCACATCAAACTTATGTTCATCACATTTTAACTATTAGCTTCAATGGTTTTATACTTTATCACACTATGATGATGTTATG GTTTAACTCGGACATGATTGTTTATTATTTATGTGTTCTAGTCTGTTATCTAAATCAATATTCTAAGATTACTTTTATCA GCATTGTCTACGGTTAGAATAGTAATATAATACTAGTTATATGTGTACACGTAACAACTTAAGCTTTTGAGGTAGTTGAT TCATGACATAGTATTAGAGCCTCTTTGACCAAGTGGATATGGAGTCCAATCCTTGTTGCCTCCAAATTCTAATAAATTTG AGTTTCAACACAAGGTAGGTGGACTTGTGCATTGTCCACGCTTCAAGCCCAATGACCACTTGCATGAGAGAACACTAGAA ATAAAATATAAAACCATTCATTTGTCTTCTTCACCCAATAGTTTAAGCTTTGGGAATAGTTTGTTAATGACACCAACACC CATTATGTGATTGTAACCGGGGATGCTAACTTTAACTTTCAGTCTTGGAATTACTGACTTTTCTGTTAACATTTAATCAC CGGATATTGGAGTATATATGATTAAGTTGTTATCAGTGTTAAGAATCCTATTTCTATCATTTAGTTAGAAATAGGTAGTA ACAGCTATCAGCTAGAAGTTAGTTTAACGCTGTTGAGCTTAGCAACTGTCTGGGGACACTTTATAAATGTCTGTTGTATT CATTCACAGTTGAATAAAGATTCAGTTACTAGGATTTTACTTTCTTTCTCATTTTATAATAGCCGAAGCCTAGAATTGAT TACACTCTGAAGGCTGTTGGTGGGAGTTTGACGGCACTTCCTGGAGTTTCAGATATGATTGATGTGAGTTCTATTTTATG AACTTTCCACTTTTTTCCCTTTTACTGATTTTGAATTAAAATTTATAATCCACTCTAACTTTTACGCACCATTTCACAGG ATACTGTGAACTCAATTGTTACTGATATGCTCCAATGGCCTCATAGGATTGTTGTTCCACTTGGTGGTATTCCTGTTGAT ACTAGGTAATGTGAATCTTATGGAAGTTTTGTTTGTTGTTTTTTATTTCTGGATGTCAACCAAAGCATGTCTATGTTTGT TACCATATCTAATAAGTAGTATTTTGAAGTGAATTTGAAATTGTTCATTTTTTTTTTCTCTCTCCTCTGCTCCTTTGAGT GAAAGGAAACAAATTGAGATTTGGAAATATGCTAATTCAATGTAATTGCTCAAACATTTTAAACTGCTTAAGCACCTTTA ATTATTTTTTTATTTACTTGCAGTGAACTGGAGCTTAAACCGCAGGGAAGGCTTACTGTGACTGTGGTGAAAGCAAATGA TTTAAAGAATAAGGAAATGATTGGGAAGTCTGATCCTTATGTGGTTGTGTATATTCGCCCACTGTTTAAGGTTAAAACGA AGGTTATTGATAACAACCTCAATCCTATTTGGAATGAGGTCTTTGACTTGATAGCAGAAGACAAGGAGACCCAGTCACTC ATTCTTGAGGTTTTACACTACTAATACTTCACATTCTTCTTTTATGCTACTTTATTCTGCATCATTTCTTTTGGATATTC CATGTGACATTGTGCTTACTCTAGTTCTAGGAAAGTAGAATATATCTTCCTTGTTTGTGATAATTACTTATTGAATATTT TTTTAAAATCAGATATATTCAATATATGAACATGAAAGTATCCTAAATACAGTCTATTCAATATATGAACATGAAAATAT CCTAAATAGAGTCTGTTCAATAGTTAGAGATAAATGAAGACGTAAAATCCTAGTGAAGCCATTACAAGGACTTAGATCTA AATGGCCTCACCGGTAAACTTGGTATTTGAAATAACAGGTGAGAAATGTTACATTGCTGTTTCTTTAGTGGTATATTTCT CCCCCAACAGATTCCAACACTAGTGACAATTTTACGTAGTGGTAGTAGTGTAGTACTAGTGTATATGAGAATATATATAC TCTCGAAATGGTTGGTTTCTTATAGGCCATGAGTTATTAGAAACTTTTCAATTCCGGATTTGGACAAGTTCGTACTTTAG GACCTGTTTGGTTTGAGAAAACATTTACAAAATTGCTACTTTGTTTTTATATTATTTCCTATTTTTGAAGCTATGAGAAA ATAGTTTTTTTGTTCTTTTCATTGTTTCCTACGCGAATCTTTAGAATTAGGAAACGAAGTGAAAATAAAGTGATACTATT GCCATTATTAATGAAAATAGAAATGAATAAAAAAATATGTTTTCTAATCAATGACATTTATTTCCCCCCATAAGGTTTGA TTATTTTTTCTTTACACAGCTACATGTGTTAATATTTTAGTTTGAAATCTTCTAATCTTTCCCAATAACTGCGCAATTCC CGTGAAAGTGTTTCTATTACATTGAAATAAATGATTTTCCCGGCTTTGTGAATAGGTTTATGATAAAGACATTGGGCAAG ATAAACGATTGGGAATAGCAAAATTACCACTGATTAACCTGGAAGCAGAAACTGAAAAGGAGCTCGAATTGAGGCTGCTG TCATCACTTGATACCCTGAAAGTGAAAGATAAGAAGGATAAAGGAACCTTGACAATAAAGGTATAGCTAGACATGCATTT ATTTGTTTGTATTTGGGGATGACATCATTACAAAATTTCTTGGGCTATGCTTGATACATATACTCATATAGATCAAAACT AATAGAGTGAAACATTTTTTTCCTTCCCCTCTAATTTTCCTTCCTATTCTGTATTCATTTACATGCTGTGTAAGTTGATT GAAGTTATAACTTATAACAATCTGATTGGAATTTCAGATCCTTTATCATCAATTTGACAAGGAAGAACAGTACGCTGCAC TAGAAGCGGAGAAAAGGATACTAGAAGAAAGGAAGAAACTGAAAGAGGAGGGAGTTATTGGAAGCACAATGGATGCACTA GATGGAGCGGCATCAGTAGTCGGGTCTGGTGTTGGAATGGTTGGTACTGGTGTTGCTGCTGGTGCCGGGCTTGTGGGAAG CGGCATTGGTGCTGGAGCCGGGCTTGTTGGCAGCGGCATTGGTGCTGGAGTTGGGATTGTTGGAAGTGGTCTCGGTGCTG TCGGTAGTGGACTGAGCAGGGCTGGTAAGTTCATGGGGAGAACAATCACAGGGCAAGGTGTATCCAGAAGGAGTGGTTCT TCTACTCCTGTCGCTAATTTTGAGGAGAATGATGGTGGTGCGAAGCCACGGTAATTCTTGCATGGACACTGATAGAGTAA TGGGAATGATCTTGAATCCTTAGTTTAAGCTTTCACAGTTGATAGATTGGTCATGTTGCTTGTTCTTTTCCATAATCTGT GGCTGGATTTAATGGAATAGAGTGAGCATGATAGCAGAAATTTCGATTTAGAGCCTGTTTGTTAAAAACACAAAACGGGG AAATGTTACATCCCAGAGGCATGTTAGAAGTAGCTAGTTGTTACTTTTCTGTTTTGTTAATCTAAATGAAGAGATAGAAC GTTGTCCAAACAGGCTCTAAGTTTTAGTTTTACTCCCTTGTTTTATCTGTAATTATTAACCAGGATGTGTAATAAAAGTG TAAAATCTAATCTTACTTATTGCATTTCCCCTTCAGTTCACACATAGCAATCACATAAACAGACATCCTAAT
CDS sequence (LotjaGi1g1v0465600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGTTGTTTTTTGGGATTTTTCTGGGGGTAGTATTCGGCGTAGCATTGATGGCTGGTTGGGAGCGCATGATGAGGTA CCGGAGTGCCAAGCGAATTGCAAAGGCGGTTGATGTTAAACTCCTTGGGTCCCTTAACAGAGATGATCTAAAGAAAATTT GTGGTGAAAATTTTCCTGAATGGATATCTTTTCCTGTATATGAGCAGGTGAAATGGCTAAATAAGCTGCTGTCCAAACTA TGGCCATTTGTGGCAGATGCAGCAACTTTGGTGATAAGAGAATCTGTTGAACCGTTATTAGAAGAGTACAGACCTCCTGG AATTACTTCATTGAAGTTCAGTAAGCTGTCTCTCGGAACTGTCGCTCCGAAAGTTGAAGGTATTCGTGTTCAGAGTCTTA ACAAAGGTCAAATCATAATGGACATTGATTTCCGTTGGGGTGGTGATCCCAATATTGTTTTGGGTGTTGAAGCAGCACTT GTTGCATCAATCCCTATTCAGTTGAAGGATCTCCAGGTTTTCAGCATTATCCGTGTTATATTCCAACTTGCTGAAGAGAT CCCCTGCATTTCTGCTGTTGTTGTTGCCCTACTTGCAGAGCCGAAGCCTAGAATTGATTACACTCTGAAGGCTGTTGGTG GGAGTTTGACGGCACTTCCTGGAGTTTCAGATATGATTGATGATACTGTGAACTCAATTGTTACTGATATGCTCCAATGG CCTCATAGGATTGTTGTTCCACTTGGTGGTATTCCTGTTGATACTAGTGAACTGGAGCTTAAACCGCAGGGAAGGCTTAC TGTGACTGTGGTGAAAGCAAATGATTTAAAGAATAAGGAAATGATTGGGAAGTCTGATCCTTATGTGGTTGTGTATATTC GCCCACTGTTTAAGGTTAAAACGAAGGTTATTGATAACAACCTCAATCCTATTTGGAATGAGGTCTTTGACTTGATAGCA GAAGACAAGGAGACCCAGTCACTCATTCTTGAGGTTTATGATAAAGACATTGGGCAAGATAAACGATTGGGAATAGCAAA ATTACCACTGATTAACCTGGAAGCAGAAACTGAAAAGGAGCTCGAATTGAGGCTGCTGTCATCACTTGATACCCTGAAAG TGAAAGATAAGAAGGATAAAGGAACCTTGACAATAAAGATCCTTTATCATCAATTTGACAAGGAAGAACAGTACGCTGCA CTAGAAGCGGAGAAAAGGATACTAGAAGAAAGGAAGAAACTGAAAGAGGAGGGAGTTATTGGAAGCACAATGGATGCACT AGATGGAGCGGCATCAGTAGTCGGGTCTGGTGTTGGAATGGTTGGTACTGGTGTTGCTGCTGGTGCCGGGCTTGTGGGAA GCGGCATTGGTGCTGGAGCCGGGCTTGTTGGCAGCGGCATTGGTGCTGGAGTTGGGATTGTTGGAAGTGGTCTCGGTGCT GTCGGTAGTGGACTGAGCAGGGCTGGTAAGTTCATGGGGAGAACAATCACAGGGCAAGGTGTATCCAGAAGGAGTGGTTC TTCTACTCCTGTCGCTAATTTTGAGGAGAATGATGGTGGTGCGAAGCCACGGTAA
Protein sequence (LotjaGi1g1v0465600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGLFFGIFLGVVFGVALMAGWERMMRYRSAKRIAKAVDVKLLGSLNRDDLKKICGENFPEWISFPVYEQVKWLNKLLSKL WPFVADAATLVIRESVEPLLEEYRPPGITSLKFSKLSLGTVAPKVEGIRVQSLNKGQIIMDIDFRWGGDPNIVLGVEAAL VASIPIQLKDLQVFSIIRVIFQLAEEIPCISAVVVALLAEPKPRIDYTLKAVGGSLTALPGVSDMIDDTVNSIVTDMLQW PHRIVVPLGGIPVDTSELELKPQGRLTVTVVKANDLKNKEMIGKSDPYVVVYIRPLFKVKTKVIDNNLNPIWNEVFDLIA EDKETQSLILEVYDKDIGQDKRLGIAKLPLINLEAETEKELELRLLSSLDTLKVKDKKDKGTLTIKILYHQFDKEEQYAA LEAEKRILEERKKLKEEGVIGSTMDALDGAASVVGSGVGMVGTGVAAGAGLVGSGIGAGAGLVGSGIGAGVGIVGSGLGA VGSGLSRAGKFMGRTITGQGVSRRSGSSTPVANFEENDGGAKPR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 523 | 523 | 0.0 | – | |
| Phobius | 1 | 18 | 18 | - | – | |
| PANTHER | 1 | 523 | 523 | 0.0 | ||
| Phobius | 1 | 2 | 2 | - | – | |
| Phobius | 3 | 13 | 11 | - | – | |
| TMHMM | 4 | 21 | 18 | - | – | |
| Phobius | 14 | 18 | 5 | - | – | |
| Phobius | 19 | 524 | 506 | - | – | |
| ProSiteProfiles | 66 | 249 | 184 | 25.044 | ||
| Pfam | 68 | 248 | 181 | 1.3E-17 | ||
| ProSiteProfiles | 251 | 347 | 97 | 16.332 | ||
| Gene3D | 259 | 418 | 160 | 1.2E-31 | ||
| SUPERFAMILY | 262 | 390 | 129 | 1.79E-28 | – | |
| Pfam | 264 | 360 | 97 | 9.8E-23 | ||
| SMART | 265 | 362 | 98 | 1.7E-22 | ||
| CDD | 266 | 359 | 94 | 2.9864E-29 | – | |
| PRINTS | 281 | 293 | 13 | 1.4E-5 | ||
| PRINTS | 306 | 319 | 14 | 1.4E-5 | ||
| PRINTS | 328 | 336 | 9 | 1.4E-5 | ||
| Coils | 391 | 418 | 28 | - | – | |
| TMHMM | 431 | 453 | 23 | - | – | |
| TMHMM | 463 | 485 | 23 | - | – | |
| MobiDBLite | 496 | 524 | 29 | - | – | |
| MobiDBLite | 498 | 514 | 17 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. | ||
| Molecular function | Lipid binding | Interacting selectively and non-covalently with a lipid. |
Expression pattern of LotjaGi1g1v0465600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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