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Field | Value |
---|---|
Gene ID | LotjaGi1g1v0465600 |
Transcript ID | LotjaGi1g1v0465600.2 |
Related isoforms 5 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Calcium lipid binding protein, putative; TAIR: AT3G61050.1 Calcium-dependent lipid-binding (CaLB domain) family protein; Swiss-Prot: sp|A0JJX5|SYT4_ARATH Synaptotagmin-4; TrEMBL-Plants: tr|I1L6S3|I1L6S3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0465600 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:97358758..97370782) extracted from Lotus japonicus Gifu genome v1.2.
GTCCATATTAAATTCCAAAAAACGCAACCATGAAGGGTGATTGATGCTGAACGAGTTCAATAGTTTTCATTCATTCCAAT CTTGTGGAGCAAGAGACACAGAATCTCCATCAATTCCTCAATTTTGACGTTACAGACAACAAAAAGTTAACACTTTTGAA GCAAACAGAAAGAGAGAGAAACAGAGTGAGTCTCATAACTCATTTCTTTGAGTTGCATTGCACCTTTGTTGTGATCACCT TCCAAAATTTGGTTTTTCATTGACCCTTTAGGCTAATTTTCTCAAATCTCATTGTAAGTTTTAATCTTGGTTTGATTTGT GTGTTCTTTTGCTTGTTCATGATCTCAAATTCTGTTTTTTTTTTTTTTTTTTTTTTTTGCATAACCGTGGCGGTGTTGAT CTTTTTTTAATTTTTCCCATTCTTTTCTTGTGTTTTGTGTTGAAGGGGTGTCATCGGTGTTTGGAATCTGGGAAAATGGG GTTGTTTTTTGGGATTTTTCTGGGGGTAGTATTCGGCGTAGCATTGATGGCTGGTTGGGAGCGCATGATGAGGTACCGGA GTGCCAAGCGAATTGCAAAGGTATGGTGGTTTGAGCTGTTTTTCTTGAATTTGGTTGTGTTGATCAATGTATTGGGAATT GTCTTGATCAATGTTTTGGAAATGTTATGCATTTGTTTGGAATGTGTAATGTTGAAGAAAAGTTGATGAATTGAAATGTG ATAAGTGGGTAATGTGGAACAAAACAACCATTAGCCTTCTAATGCAGTTTTGATTTTTATGTGACTTTGGGTTCAGATTC TTGAAAAAAGTATGCTGAAACAAGGCTTGAAAAATGAATGCTGGGGGAAAAATACAGAGTGTGCTTTTTTTAAGCAATTG GTTTTGTTAGAAATAATAAGGACACACTTCATAGATGAAGATTTGAGAACATATCATACAGGAAGTCTTATGTATAAGTT ACCTTGGATCCATCATACACAATATTGAGGAGATATAGAGAAATGCTTTGGGTGTGATTTGTGATAGAAAGATTTCATTC ACTTTAAAGGAAAATTTTACCATAGCTTTAAGACTTGCAGTATTGTATGAAACTAAAGTTAAGCAGTGACACTTATTTAG GCTATGCCTATTTACCCAAAAGATAGTTTACGGGTAAGGATTGCTCTACCCATTATAAATACCTATTTAACCATATCTCT AGTCAATGTGAGACCATAACAGTTAACACTCCCACGCTGTCCTAAAATAATCACAGGCTAGATTGTTTTTGTTATTTTTT CTTAGAGCAGCCGTGGGTGAGGTTGATTCTTGAACTTTAAACTTCAGCAGGTGGCCAGCATGAGCCCAATAACGAATTTA GGATTGAGTCAGATACCATGTTGAGAATTTTAGCTTTGCCTAACTATACCCCAAAAGCTAGCTTAGGGGTGAGCACTGCC CTTCCTTTTATAAGTTTCATTTCTGTAGTCAATGTAGGACCTTAACACGTTGTGATGGGCGCATGTGTTCTGTCTGTGCT GTCATATACTTTTTGCCTTCTTGAATCCTGCATTGAGGAACTCTGAAGAGAATTTTGGTATTGCCATAATTGGAGTCACT AATGGTAGTGGAACAAATGGTATAACGTACTCTGTAATGGTAATAGTCCATAGTTAGATGAAGTATGAATGCATAAATGT AACTATAAAACTGTACAGTAGTCTATTACCAGATGTTATAGTGGAGTTTGATGGGAAAATAGAAATCTGTAACCTTTGCT TGTTGAATAAGATCTAACACTGTTGGCTCTATTCAATGAGTTCAAAGCTTAAAGATAGGAACTAGAAAAAAGAAAACACA GATTCATTGGAAATTGAATGATTAGGGTAATTTATTAATAATAAGAAAAGCAGGCAAGATGAACAATCTCCACTGAGATG TTGCCAAGAACACAGCTCATTACAGAGAGATACTCTCCCTCACAAATGGCCATATCCACTCACTCCAAACCACAGGATAC CCGCACACGGTAACTAACTCACCCACCACACTCCATGGACCCCACCCGCATAACAAACTTCCCACTTACAGCATGTGTCT TAGGACTCATTTGAGCCTCCTCTTGTAAATCTACAATATCTTAGGTCCTTATATCAATTGTTCAATGGGTTCAAGGCTTG GGTCCCGATCACTTATATAATTTATCTGTTTGTGTCTTTGAACCCTTTCCCTGTGCCTGTGGACTTCAGCATGGTGTCTG GACTCTGGATCCTGTATACTATACTGATTAACCACAGCACTGGATGAAGACAACAAAAATAGGCTTAAGAGGAGAATGAA AAAAGAAGGCATTGTATTTGTATTGTACCCTTATCTTAACAATATTCATTTTTCTCTGCAGGCGGTTGATGTTAAACTCC TTGGGTCCCTTAACAGAGATGATCTAAAGAAAATTTGTGGTGAAAATTTTCCTGAATGGATATCTTTTCCTGTATATGAG CAGGTGGGATTCTCATCTGTTACTGTAATACTTAGCTTTCTACTGAAATGATTTAACAAAACGCTCCAATTATTCCAGTA TTATATTATTGGCAAGCCAAGTTAAAATTTGAAACTCCTTTTTTGTTTCCTAGTTCATATACTCTTTATGTTTTCTTTGA ATGATCCTTCCTTGCATGGGTTTTTTCAGGTGAAATGGCTAAATAAGCTGCTGTCCAAACTATGGCCATTTGTGGCAGAT GTGAGTAAACTTGCATGCATGTTTAATGTTTGTAGAATAATTATTAAACAACAGCAGCTTGTGTCATGTTGTTCATTGAT TTCTTACTAAATTTATTTTCTAGGTTAAATCTTGATATTTCACTTGTTTCTGTTCTGTAGTATTTTATTTTACAAAACAT ATTTTGTTCATAATATTGGTTCTAACCCCCCAGTTGTTCAGTTCGAATGAGAAAAAGAACAAACTGGATCTATTGATTAT GGAGAGATACTGAATTCAATATTCTTATTTGATAATCTAGTGTGGAATTTGGGGGAAGTTAGATGTATGAACTATGAAGC CTTACCCCAAGTTGAGAGGCTATTTCTGTGACTAGATTCAGTGACCCCTAGTTCTGTATGTTCCCTGCATCATTCACCTT GCTTTCCTTAGACATAAATCCTATTATGCTTAGGCTGTAGGAGACCTTTTTTTATTTGTTTTCCTTGCTAATATTCTTTT CCGAGGATTATTCCTACATTGCTTAAATAGCTGACTTATGTTCATATGGTTGTTTTTAATGTTTTAGGCAGCAACTTTGG TGATAAGAGAATCTGTTGAACCGTTATTAGAAGAGTACAGACCTCCTGGAATTACTTCATTGAAGTTCAGTAAGCTGTCT CTCGGAACTGTCGCTCCGAAAGTTGAAGGTATTAATCAGCAGTAATTCCTCTCTTCTTCCTTTTTCCTGCTAGGTCATTA TGGTATTGAGTGGTCTATATGTAGCCAACCCCACTTAGTGGGAATAAGGCTTTGATTGTTGTTGATGGTTGTTATTCTTT CCCAGCCAAATTTACTACTGTATCAGATAATGAGGTTGATTGTTAGAGTAACCAAAGTGTGACTCAAAGAAGTCCCACAT TGTATAAATAAACAACTGTACAATAGTATATAAGTTAAAGGACACACACACCCATTGCCTTAAGTGCCTTAAGGTTTTGT GGTGATATGGAATTATGGTTTTAACTTTATTCTAACATTTATTTATAACTGATATGTCATTCTATTTTGACAACAATTCT TCTTTTAAGCTGCTTCATATGTGACTATTTTCAGAAACAGATCATCTAAATATCTCAATTTTTCATTTCTATATATTTTT TCCCTTTCTTTGCCATTTAACTAATTATTCTCTGCCTTAAGAGAGAGAGAGGATCTTTATGCACTATGTTTTTCATTTTT TCTCCTTTTTCTCTCCTTGCAACTATTTTCTTTTTTCGAAAGCAAAATCTATTGATATATTGATGAGGAAATTGACAGGA TATACATCGAACTACTTTTTAGAGAGGTTGTCCCTCTCTTAGGCCTTATTTATATTAGCAGATTAAACTTTCTTTGTGGC TTCTTATTGGTACTCCTCTAATGGATGTTTGAGGTGATTTTTTTACTGATATCCAAAGAGATTGGACAGTTTTATTCATC TTTCAGCCACTTTGACTTATTGTTTCCCACCCTCTCTCTGCATTAAGATTTGTTATCTTCTGCCTAATGTACATGCTTCA TTTTCTTTTATAATTATTTTCATTTTATTTCATTTTTCAAGTTTTGCGGAGGAGTCCATGTAAACATGTATCATGAACTA AAACCAATGCACAACTATATCTTAAAACTTCCAGCAGTTAAAATAAAAATCATCATCAATTGCAGTTAATAATATAAAGA AACCTCAGTCTTCTCTGAAGAAACACCTTCCCACCATCAAATCTTATTTGCCCTCATTTTATACTTTCTTGCTCTAGCAA GCAGCTGGTAAGCACAAATCCATATCTTGATGTGTCAGAGCCAAGTTGAAAACTTGTTTGAGCAAACGAATTTTATCTTT GTAGAAAATATCATTTTTATTTGCTATAGTTGCATTGGTGCATGAAATATGCTGGACCCAACACTTCATTCGTGATGACT AGTGACTAGTGAGGGATTGTTAGCACGAAAATTTGAGATTTGCGAACTGTTTTTTAATTGACGTAAAGAATGGAGGCCAG GAATGACCAGTCTTATACTAGTGCTAAAATGTTCAGGGTGAGGTCCAAGGTCATGGCATGCTAGAAGCTTGAATTAGTGC TTAAACTGGTACTTACAACTGATCTACCTAACAAGGAGTCAAACCGAAATATTCATACCCAAAAGCAACACATATTGTCC ATAATCTCTTTTCAAAAACAGGGAAAGAAGCAACTATCGTGAGATTCAAGATTTAATATGTCTTGAATCGAAGTTAATTA GATGAAATGGATAAATCAACTTTGAAGTTTTTGCAGGTTTAGAATAAATCAAAATATTTAAGTTGTGTGTGCCATATGCA ACATAAGCTTTATAACAATAATTTTATAAGTTAGAATCTACGTATATTGTATTTATGAAAAATGAGCACATAGTTGATGA GATTGTTATTAAGATGTTTGACTTATGCATGTTAGCAATATTCAGACCAAACAAAATGTTATCAAATGCAATTTTTATTC CACCTTTGTTTTTTCTTCCATTATCAATATCTCCGTCGAGTCATTTTTGTATATCAAGAAATAATGCATGCATAGTTTCT TCATCCATTCAGGTATTCGTGTTCAGAGTCTTAACAAAGGTCAAATCATAATGGACATTGATTTCCGTTGGGGTGGTGAT CCCAATATTGTTTTGGGTGTTGAAGCAGCACTTGTTGCATCAATCCCTATTCAGGTTAGACTGAGCAGAATTATTCTATG TTGAATTTCATGTTCCTTTGCTAAATTTCTAAATCTTGAGTGTTATTGGTTTTTGCTTCAGTTGAAGGATCTCCAGGTTT TCAGCATTATCCGTGTTATATTCCAACTTGCTGAAGAGATCCCCTGCATTTCTGCTGTTGTTGTTGCCCTACTTGCAGAG GTAACCATTGAAGGGTGATGTTCTACTAAATTTCTTAATATTCATTTGCAGTTTCGTATGTGCAAACCCTTTTGCATGCT CTTGCAAATCAAGCTAAAATCATTGGTAGACCATTGACCTTAAGCATGTTTCCACTTCATGATTGTGTGGCATTAGTTAC TTTTTTTCTTTAAGAAGAAATTGACGTGAGAATTAAATTTGTTGGTTAAACAAACTGAAATTTTTGATAATTGATCCCTT CACATCAAACTTATGTTCATCACATTTTAACTATTAGCTTCAATGGTTTTATACTTTATCACACTATGATGATGTTATGG TTTAACTCGGACATGATTGTTTATTATTTATGTGTTCTAGTCTGTTATCTAAATCAATATTCTAAGATTACTTTTATCAG CATTGTCTACGGTTAGAATAGTAATATAATACTAGTTATATGTGTACACGTAACAACTTAAGCTTTTGAGGTAGTTGATT CATGACATAGTATTAGAGCCTCTTTGACCAAGTGGATATGGAGTCCAATCCTTGTTGCCTCCAAATTCTAATAAATTTGA GTTTCAACACAAGGTAGGTGGACTTGTGCATTGTCCACGCTTCAAGCCCAATGACCACTTGCATGAGAGAACACTAGAAA TAAAATATAAAACCATTCATTTGTCTTCTTCACCCAATAGTTTAAGCTTTGGGAATAGTTTGTTAATGACACCAACACCC ATTATGTGATTGTAACCGGGGATGCTAACTTTAACTTTCAGTCTTGGAATTACTGACTTTTCTGTTAACATTTAATCACC GGATATTGGAGTATATATGATTAAGTTGTTATCAGTGTTAAGAATCCTATTTCTATCATTTAGTTAGAAATAGGTAGTAA CAGCTATCAGCTAGAAGTTAGTTTAACGCTGTTGAGCTTAGCAACTGTCTGGGGACACTTTATAAATGTCTGTTGTATTC ATTCACAGTTGAATAAAGATTCAGTTACTAGGATTTTACTTTCTTTCTCATTTTATAATAGCCGAAGCCTAGAATTGATT ACACTCTGAAGGCTGTTGGTGGGAGTTTGACGGCACTTCCTGGAGTTTCAGATATGATTGATGTGAGTTCTATTTTATGA ACTTTCCACTTTTTTCCCTTTTACTGATTTTGAATTAAAATTTATAATCCACTCTAACTTTTACGCACCATTTCACAGGA TACTGTGAACTCAATTGTTACTGATATGCTCCAATGGCCTCATAGGATTGTTGTTCCACTTGGTGGTATTCCTGTTGATA CTAGGTAATGTGAATCTTATGGAAGTTTTGTTTGTTGTTTTTTATTTCTGGATGTCAACCAAAGCATGTCTATGTTTGTT ACCATATCTAATAAGTAGTATTTTGAAGTGAATTTGAAATTGTTCATTTTTTTTTTCTCTCTCCTCTGCTCCTTTGAGTG AAAGGAAACAAATTGAGATTTGGAAATATGCTAATTCAATGTAATTGCTCAAACATTTTAAACTGCTTAAGCACCTTTAA TTATTTTTTTATTTACTTGCAGTGAACTGGAGCTTAAACCGCAGGGAAGGCTTACTGTGACTGTGGTGAAAGCAAATGAT TTAAAGAATAAGGAAATGATTGGGAAGTCTGATCCTTATGTGGTTGTGTATATTCGCCCACTGTTTAAGGTTAAAACGAA GGTTATTGATAACAACCTCAATCCTATTTGGAATGAGGTCTTTGACTTGATAGCAGAAGACAAGGAGACCCAGTCACTCA TTCTTGAGGTTTTACACTACTAATACTTCACATTCTTCTTTTATGCTACTTTATTCTGCATCATTTCTTTTGGATATTCC ATGTGACATTGTGCTTACTCTAGTTCTAGGAAAGTAGAATATATCTTCCTTGTTTGTGATAATTACTTATTGAATATTTT TTTAAAATCAGATATATTCAATATATGAACATGAAAGTATCCTAAATACAGTCTATTCAATATATGAACATGAAAATATC CTAAATAGAGTCTGTTCAATAGTTAGAGATAAATGAAGACGTAAAATCCTAGTGAAGCCATTACAAGGACTTAGATCTAA ATGGCCTCACCGGTAAACTTGGTATTTGAAATAACAGGTGAGAAATGTTACATTGCTGTTTCTTTAGTGGTATATTTCTC CCCCAACAGATTCCAACACTAGTGACAATTTTACGTAGTGGTAGTAGTGTAGTACTAGTGTATATGAGAATATATATACT CTCGAAATGGTTGGTTTCTTATAGGCCATGAGTTATTAGAAACTTTTCAATTCCGGATTTGGACAAGTTCGTACTTTAGG ACCTGTTTGGTTTGAGAAAACATTTACAAAATTGCTACTTTGTTTTTATATTATTTCCTATTTTTGAAGCTATGAGAAAA TAGTTTTTTTGTTCTTTTCATTGTTTCCTACGCGAATCTTTAGAATTAGGAAACGAAGTGAAAATAAAGTGATACTATTG CCATTATTAATGAAAATAGAAATGAATAAAAAAATATGTTTTCTAATCAATGACATTTATTTCCCCCCATAAGGTTTGAT TATTTTTTCTTTACACAGCTACATGTGTTAATATTTTAGTTTGAAATCTTCTAATCTTTCCCAATAACTGCGCAATTCCC GTGAAAGTGTTTCTATTACATTGAAATAAATGATTTTCCCGGCTTTGTGAATAGGTTTATGATAAAGACATTGGGCAAGA TAAACGATTGGGAATAGCAAAATTACCACTGATTAACCTGGAAGCAGAAACTGAAAAGGAGCTCGAATTGAGGCTGCTGT CATCACTTGATACCCTGAAAGTGAAAGATAAGAAGGATAAAGGAACCTTGACAATAAAGGTATAGCTAGACATGCATTTA TTTGTTTGTATTTGGGGATGACATCATTACAAAATTTCTTGGGCTATGCTTGATACATATACTCATATAGATCAAAACTA ATAGAGTGAAACATTTTTTTCCTTCCCCTCTAATTTTCCTTCCTATTCTGTATTCATTTACATGCTGTGTAAGTTGATTG AAGTTATAACTTATAACAATCTGATTGGAATTTCAGATCCTTTATCATCAATTTGACAAGGAAGAACAGTACGCTGCACT AGAAGCGGAGAAAAGGATACTAGAAGAAAGGAAGAAACTGAAAGAGGAGGGAGTTATTGGAAGCACAATGGATGCACTAG ATGGAGCGGCATCAGTAGTCGGGTCTGGTGTTGGAATGGTTGGTACTGGTGTTGCTGCTGGTGCCGGGCTTGTGGGAAGC GGCATTGGTGCTGGAGCCGGGCTTGTTGGCAGCGGCATTGGTGCTGGAGTTGGGATTGTTGGAAGTGGTCTCGGTGCTGT CGGTAGTGGACTGAGCAGGGCTGGTAAGTTCATGGGGAGAACAATCACAGGGCAAGGTGTATCCAGAAGGAGTGGTTCTT CTACTCCTGTCGCTAATTTTGAGGAGAATGATGGTGGTGCGAAGCCACGGTAATTCTTGCATGGACACTGATAGAGTAAT GGGAATGATCTTGAATCCTTAGTTTAAGCTTTCACAGTTGATAGATTGGTCATGTTGCTTGTTCTTTTCCATAATCTGTG GCTGGATTTAATGGAATAGAGTGAGCATGATAGCAGAAATTTCGATTTAGAGCCTGTTTGTTAAAAACACAAAACGGGGA AATGTTACATCCCAGAGGCATGTTAGAAGTAGCTAGTTGTTACTTTTCTGTTTTGTTAATCTAAATGAAGAGATAGAACG TTGTCCAAACAGGCTCTAAGTTTTAGTTTTACTCCCTTGTTTTATCTGTAATTATTAACCAGGATGTGTAATAAAAGTGT AAAATCTAATCTTACTTATTGCATTTCCCCTTCAGTTCACACATAGCAATCACATAAACAGACATCCTAATAAATTCATT AACTTCCCAATTCTGTGGTAGCTTGAATCACATAAATAGACATCTTAATAAATTTCTGCTCAGAAAATACAACTTGCAAA TCTCACGTCCCTAAGAATGGAACGTTGCATTACTACGGTAAAACAAAATCAAAATTTTAACCGATACATAAGTCTTTCTT ATTGAACAAACTCATTTTGAACACCACACAATCTGATTTAAGGTACCACAACAAGCACCAATTAAGAATGCTTGAGTGAA ATTGGTTGAACTTGAAGAGGTTGGTCCTTCTTTAAGGATAATCCAAAATGCTCCTTCATGTTTATGTGTTCAGGTGTTAG CCCATCAGGTAGCTTCCATTCAAAGCAGTGCAGAAAGGATGCCACTATTAAATGCACTGACCTAAGAGCTAATGGCAATC CAGGGCAACATCCTTTTACCTGCCCCAAAGGGTATAAGCTCAAAATTCTGACCCTTAAAATCAATTTCACTACCCAAAAA TCTTTCAGGCAAGAATATATTTGGATTTTTCCAAATGGTTGTATCTCGTGCTATAGCCCACACATTAACTATAACTTGTG CATCTTTTGGCACTAGGAAGCCAGCTATGTATGCATCTTCATCACACTTGCGTGGTACAAGAAATGGACCTGGTGGATGC AAGCGAAAAGTTTCTTTTGCAACTGCTTGTAAGTAAGACAAATTTGAGATGTGTGATTCTTCAAGTGTTGCATCCTCACC AACCGCTTGACACAACTCTTTTCTTACTTTTTCCAATTTATCATCAGGGTTACGCAATAGCTCTGTCATCATTCATTCAA CCGTGACGACAGTTGTCTCGATCCCAACAATAAATAATTCCTATAATGGAACATCATTTCATCAAATACCATACTTTTTA AAATTCAAACGATGTAAACGGTAAAACAACCACCTATCTAAAAGCTTACGCCGTTAGGTAAGATTTATATGAATGATTTT ATATTATATTATTTCCAACACAACCCTTCAAGTTGAGCTTTGCCCGTTTGGGCATTAAGGTTGAAAAATGCACAGTTCCA CCTACCATGTGCTTTAATTCCTTTTGTTATTAGAAGAACAGGGGCTGACGACAAGAATCGAATTCTAGACCGCTTGATCA AGGAGTCTCTAATACCGTGTCAAACAACTAATTATCTCAAAAGCTCAATCTCTTAAGTTAAAGTTACATGAGTGGTTTTA TATTATTATTTTTAATATAAACTAGGTACTAACCAGATGTTCAATCTCATTGTGGCTCAGCTCAGAAGTGGCTCCAACGT TGCTAAGAATTGAATCTAACACATCATTGCCCACCTCAGATATGGAATCAATTTTTGAAACTCTGGAACACACTCTTTCC TCAATAATTCCATCAATAATTTTAAATAACTTGGTGAAGTAAATGGACATCCTAGCTTGAATACCTTGAGGGTCAAGTGG ACCAAGAATGGGAAAAAGTCCACAACGTTTGGCTTTCCTCCCTCTTCCATGATACCCCAATAATGTTCTTAAACTCTTGT GACTTTTCATCAGATGTAGAATGAGATAAATCCAAAGAGAAGAAAGTGTTTGAAATTGAATTGAGTACAGTTGTAAAAAC AGGCTCACCAAGATCCAGAGTCTCACCTTTTATGCTTTTCTCCTTTACATAATCCAACAACTCTTTTAGTTTTTGTTGTC GAACAATTTTTGTGGAGTCAAGCATTTGTGAGGAGAATATTGTGGCACAATGTCTTCTAAGGTTCCTCCACTCAGCTGAT GGGGGCAGAAACGTGATTGAGCTTTTTTGGTCAAACACACGAGAAGCATGTGGAACTATTCTACTAGAAAAGGCTTGGCT ATTCTCTTGCAACACTTGTTTCGCTAATTGTGGAGAAGAGATGACTATGGTGGTTCTGCTGCCTAGTTTCAATGTTATGA TGGGTCCATAAATTTTGGAGAGTTTGGTGAATGCTATGTGTGGATTCCTACCAAGTTCTAATATGTTTCTTATGATATGA AAGAGGTTTGGCCCTGGTGGAAGCTTGATGGTGTGGTGGTTTTGATGGAATAATAATCTAAGGATGAAGAAGGTGAGAGT TCCTGCACACACTATGGTAATACTAATCAATAGCAGATCCATGATTGATTAGTTTCTCTCCCTTTGAAGATACTGCATAC AGGTATATATTTGTAGAAATGTATTTTAAAATTAATTTTGAAGTTTGAGTCAGTTCTCATCTTTTAAGTATTTATACAAC GGAGGCTCCCACACTTGCCTTCTTGTTTTAGAAAGCAAAAGTTTATTGAATACGCAAGAAGTCGAGATATAGATTTTCTC CACAATGAATTAAATACAAACCAAAGCAAAATGAAAGAAACACAACGAAAATAACAAACACCAACTTACAAGATACTCCC TCCGTTCTTATTTATAAGAACCAAATGAAGGGTGTAGCTTGGTCATTTTTATAAGAACCAATTCAAATTTCAAGATGCAT TAATTATTTTTTGGCAACAATACCC
CDS sequence (LotjaGi1g1v0465600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGTTGTTTTTTGGGATTTTTCTGGGGGTAGTATTCGGCGTAGCATTGATGGCTGGTTGGGAGCGCATGATGAGGTA CCGGAGTGCCAAGCGAATTGCAAAGGCGGTTGATGTTAAACTCCTTGGGTCCCTTAACAGAGATGATCTAAAGAAAATTT GTGGTGAAAATTTTCCTGAATGGATATCTTTTCCTGTATATGAGCAGGTGAAATGGCTAAATAAGCTGCTGTCCAAACTA TGGCCATTTGTGGCAGATGCAGCAACTTTGGTGATAAGAGAATCTGTTGAACCGTTATTAGAAGAGTACAGACCTCCTGG AATTACTTCATTGAAGTTCAGTAAGCTGTCTCTCGGAACTGTCGCTCCGAAAGTTGAAGGTATTCGTGTTCAGAGTCTTA ACAAAGGTCAAATCATAATGGACATTGATTTCCGTTGGGGTGGTGATCCCAATATTGTTTTGGGTGTTGAAGCAGCACTT GTTGCATCAATCCCTATTCAGTTGAAGGATCTCCAGGTTTTCAGCATTATCCGTGTTATATTCCAACTTGCTGAAGAGAT CCCCTGCATTTCTGCTGTTGTTGTTGCCCTACTTGCAGAGCCGAAGCCTAGAATTGATTACACTCTGAAGGCTGTTGGTG GGAGTTTGACGGCACTTCCTGGAGTTTCAGATATGATTGATGATACTGTGAACTCAATTGTTACTGATATGCTCCAATGG CCTCATAGGATTGTTGTTCCACTTGGTGGTATTCCTGTTGATACTAGTGAACTGGAGCTTAAACCGCAGGGAAGGCTTAC TGTGACTGTGGTGAAAGCAAATGATTTAAAGAATAAGGAAATGATTGGGAAGTCTGATCCTTATGTGGTTGTGTATATTC GCCCACTGTTTAAGGTTAAAACGAAGGTTATTGATAACAACCTCAATCCTATTTGGAATGAGGTCTTTGACTTGATAGCA GAAGACAAGGAGACCCAGTCACTCATTCTTGAGGTTTATGATAAAGACATTGGGCAAGATAAACGATTGGGAATAGCAAA ATTACCACTGATTAACCTGGAAGCAGAAACTGAAAAGGAGCTCGAATTGAGGCTGCTGTCATCACTTGATACCCTGAAAG TGAAAGATAAGAAGGATAAAGGAACCTTGACAATAAAGATCCTTTATCATCAATTTGACAAGGAAGAACAGTACGCTGCA CTAGAAGCGGAGAAAAGGATACTAGAAGAAAGGAAGAAACTGAAAGAGGAGGGAGTTATTGGAAGCACAATGGATGCACT AGATGGAGCGGCATCAGTAGTCGGGTCTGGTGTTGGAATGGTTGGTACTGGTGTTGCTGCTGGTGCCGGGCTTGTGGGAA GCGGCATTGGTGCTGGAGCCGGGCTTGTTGGCAGCGGCATTGGTGCTGGAGTTGGGATTGTTGGAAGTGGTCTCGGTGCT GTCGGTAGTGGACTGAGCAGGGCTGGTAAGTTCATGGGGAGAACAATCACAGGGCAAGGTGTATCCAGAAGGAGTGGTTC TTCTACTCCTGTCGCTAATTTTGAGGAGAATGATGGTGGTGCGAAGCCACGGTAA
Protein sequence (LotjaGi1g1v0465600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGLFFGIFLGVVFGVALMAGWERMMRYRSAKRIAKAVDVKLLGSLNRDDLKKICGENFPEWISFPVYEQVKWLNKLLSKL WPFVADAATLVIRESVEPLLEEYRPPGITSLKFSKLSLGTVAPKVEGIRVQSLNKGQIIMDIDFRWGGDPNIVLGVEAAL VASIPIQLKDLQVFSIIRVIFQLAEEIPCISAVVVALLAEPKPRIDYTLKAVGGSLTALPGVSDMIDDTVNSIVTDMLQW PHRIVVPLGGIPVDTSELELKPQGRLTVTVVKANDLKNKEMIGKSDPYVVVYIRPLFKVKTKVIDNNLNPIWNEVFDLIA EDKETQSLILEVYDKDIGQDKRLGIAKLPLINLEAETEKELELRLLSSLDTLKVKDKKDKGTLTIKILYHQFDKEEQYAA LEAEKRILEERKKLKEEGVIGSTMDALDGAASVVGSGVGMVGTGVAAGAGLVGSGIGAGAGLVGSGIGAGVGIVGSGLGA VGSGLSRAGKFMGRTITGQGVSRRSGSSTPVANFEENDGGAKPR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 1 | 523 | 523 | 0.0 | – | |
Phobius | 1 | 18 | 18 | - | – | |
PANTHER | 1 | 523 | 523 | 0.0 | ||
Phobius | 1 | 2 | 2 | - | – | |
Phobius | 3 | 13 | 11 | - | – | |
TMHMM | 4 | 21 | 18 | - | – | |
Phobius | 14 | 18 | 5 | - | – | |
Phobius | 19 | 524 | 506 | - | – | |
ProSiteProfiles | 66 | 249 | 184 | 25.044 | ||
Pfam | 68 | 248 | 181 | 1.3E-17 | ||
ProSiteProfiles | 251 | 347 | 97 | 16.332 | ||
Gene3D | 259 | 418 | 160 | 1.2E-31 | ||
SUPERFAMILY | 262 | 390 | 129 | 1.79E-28 | – | |
Pfam | 264 | 360 | 97 | 9.8E-23 | ||
SMART | 265 | 362 | 98 | 1.7E-22 | ||
CDD | 266 | 359 | 94 | 2.9864E-29 | – | |
PRINTS | 281 | 293 | 13 | 1.4E-5 | ||
PRINTS | 306 | 319 | 14 | 1.4E-5 | ||
PRINTS | 328 | 336 | 9 | 1.4E-5 | ||
Coils | 391 | 418 | 28 | - | – | |
TMHMM | 431 | 453 | 23 | - | – | |
TMHMM | 463 | 485 | 23 | - | – | |
MobiDBLite | 496 | 524 | 29 | - | – | |
MobiDBLite | 498 | 514 | 17 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. | ||
Molecular function | Lipid binding | Interacting selectively and non-covalently with a lipid. |
Expression pattern of LotjaGi1g1v0465600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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