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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0475300 |
| Transcript ID | LotjaGi1g1v0475300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Acyl-CoA thioesterase; TAIR: AT1G01710.1 acyl-CoA thioesterase II; Swiss-Prot: sp|P58137|ACOT8_MOUSE Acyl-coenzyme A thioesterase 8; TrEMBL-Plants: tr|A0A0L9TCU4|A0A0L9TCU4_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0475300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:98611090..98618638) extracted from Lotus japonicus Gifu genome v1.2.
CAACAACTCGGGTCCATTCTTTTACTCTACACTGATACACACCAGATAGTACCCGTTCCAAGCACGATCTTCATAATTGA ATAGCGAATACACAATTACCACAAATGGTAAGTGTAATGGCGAAGGAAGAAGGTAAGCAAGCCTCTGCGTGAAAATTTTC TGTTTGGATGCCGAGAAAATTTCCTGTTTGGATGCTGAGAAAAAGCAAATAACAACGCAACAGATTTTGATTTTCCTTTT TCTCATTTCCTCATCGTTAAATTTCTCAGCGAAACAACAGAATCAGATGATATGATCAGGAACTGAGACTTGATTTTTGA CAGAAACAGCAAATTGAATTTCGTTTTATGCGTTTGAATTTCTGTTATGATCATTGATTTCGGTTATGTCTGTTTGATCT TGTTGCAGTGTCTGAGTTTCTCGGTTGCGTTCCTCTGCTGCAGAGGCTTCCTAGCTTGTCTGTAAGGAAGATATCTGAAC TCGTTGTTGTCAAACACTATGGTAATTAGATTTGAATTTTGGAAATTTGACCTAGTTTGTTGTGTGAAATGTGAATGGCA ATGAATGAGTAAATAGTCATTTTGGTTATGTACACAAGTTTTGAAAGATTTGGGATCCGTTACCTTGTTTCCGGAAGATG TAATGATTATCTTTGTCTTTTGAATGATAAAAAACTATCAAGTTTTGTTTTTAACATCAATTTAAGGTGAATTTCGTCCG AGACTAAAGTGATTGACCTCAAACTTTCATGATCATAATGAGATGAGTATTTCATCTGTAATGAGTTAGGTGGAAATATG TTTTGAAATTTAATTATGTAGTAGTAGCATTTTGATTTTATGGTATTTATTTTAGAATTTTTTATTTTTTGGATAATGAA CTAGTAGACACATTAATGTTTGCAATTCTTGAATGATGGTTTCTCATGTAGAGCCAGGAGAGTATGTTGTCCGTGAGGGT GAACCCGGGGATGGTCTTTACTTCATTTTGGAGGGAGAGGTTTGGATATTTTTCATTTTATATTTTAGGACTGATATGCT AGGGAATTGGATTTGAAGATCGTGTTCAATTCTTTACTTCTTTAATGTTTTCAGTTCTTGAATGAGGGTTTCTCATGGTG AGTAACGGGCGCAATGGTTGTGTTCTTGCAACATTAGTTTACGAAAATTTTCTGTGTTGTGCTGAACTTTCAGTTTCTCG GTTTGCAGGCAGAAGTTGTTGGATCTGTTAGTGCTGATGACGAAAATCATCCCGAGTTTCAATTGAAAAGATATGATTAT TTTGGTTTCGGTAATAAATTTAATTCTCACGCACTTATGTTCAAAACTTCTCTTGATTGTTTAAAAGTTTTCCTTTATTG TAAAGGTATAGGCTTGTCGTTGGTTCGACCAATGAGTCATTCTCATTGATTCAGTTCGTCGACTGAGCCAATAGCCGGTC TCCTTCAGTACTGGTATTAATAGGTTTTAGTATTTTATATTTTAACTCACGATTATACATGATAGAATTACTATTAAAAG TCTTATTTCTCTCTTTTCCTTTCTCCTACCTTTGTTCTAAAACCAATATTTTCAATAGTATTCAGTACCGGAAATATGGA AATTAGTTAATAATTTTGTAATCACACAAAAGAGGTTTCACTACTCCAAAAAGTATAGGTCATATTTAGTATTTTTGTGA ATAAATTTTGTCTTGAATTTGTGTTACAATAAAGATATGAGAGATATTACCTGAAATTGTTTCATAACTGTAATTTTAGA AGACTAATGTAAACTTGCAAGTTACAGGTTTATCAAATGCAGTTCATCCTGCTGATGTCGTAGCTTTGACTAAGGTTCCA TTTTAGTTTCTTGTCCTACTGCTTTCTAAATTCCGATTTCAATCTAGTGTTATTGTAAATAAAATAAAATTTCCAATCCT ATAGCTAGTGATTGTTTTGTTTGCTATGGCAGCTATCATGCTTAGTGTTGCCACTTGAGCACTCAGCACTGCTACAGCCA AAGTCTATCTGGAGTGCCGAAAAGTCTGTTGAAACATGCTCACCTGTGGAGAATATATTGCATTTGGATCCCATAGAGGT GCTCATTTATAATATGGAATATAATAGACATATGCTACTAGAGAAGGAAAAAGATAGTGGACAGTAATGGTTGTCCTGGT TTATCTTTGATAGTAAGTAGTGGTAGGCTATATTTCCTATAATTCAGCCTTATATCTTTTTCCTCTTCTCTATGGAAGGT AGATATCTTCCGAGGAATCACCCCTCCAGATGCTCCAAAATTTGGGAAGGTGTTTGGGGGACAGTTAGTTGGACAGGTAT TGTAAAACTACTTTATCTTCTTCATATTGTATGCAACTAATTTCAGTAGCATTTCCGAGGCATAGACTTCTTATGAGGTA ATGTGTAATACATGCAGGCACTGGCTGCAGCATCAAAATCTGTTGATTGTCTTAAACTTGTTCATAGCTTGCATGCCTAT TTTCTTCTTGTGGGGGATTTTAACAGTAAGTATGTTTAATCACTGAACTTTGTTTGACATGCTCTCATGTAAACTCTTTT GTTTTTCTACTCCTTTTCTAAAGATTCATTTTCTTTTCTTAATCTACCTGTTACATTGTTTTGGATAAGCAGATTATCTT GAGTTTTATTTAAGATTTATGTTGACAAATGGTGGAAAGTTTTATTTTTTAACTGGCAGTTTAATATTTTTCTTCTTTTT GACAAATCCTACTACTGGTTTTTCATCACCAGCTCTGTGTACCAATGTGCATGTTGATTTTGGTAGGATAGCTTCAACTG TTTATATTTTTCTTAGATGGCACTGAGAGACAAGATAAATTTATAGATAATTCTAGAGAATAAAATTTTGGGTGAAGTTG TGCATAAAACAGGTAATTAATTTGTAGATCATAGTTTATCTAAACCTCTCAAGGGGCACCAAGTAATTTTAAGTTCTTTA TGGGTTGTTAGCTACACTCAGATGCTACCATGTTGCTAAATCGTTCCCCTAAAAACTTGCAGGTCTCTAAATGATCCCTT TGTTAGGTTTACTTTCTATAGTTTCTTCTGATAAAGTTCCTGTCTTTTAAGATGACAAATCATGTTTAAGTAAATCAAGC AATATTTTCTTTATAATAGAAAATTGCATGTGTATTCGTTATCATCATTCACATACTATTTTCTGTTACGGGTAATGCTA ATTCATTTGTTTGCTAGCAAATAATAGTAAAAATAATTAATGCATATGTAAACTTTCTTATTCCAGTACCAATTATTTAT CAAGTTAGTCGTCTCCGTGATGGGAAGAGCTTTGCCACAAGGAAAGTGGATGCAGTTCAAAAGGGAAATGTTATATTCAC GTTACTGGCTTCATTTCAGGTAATCCTAATTCTTCTTGACTTGGAATGGGATAAATTTTCAGTCATTGTTTGGTTTATTT ATCTGTGAATCTGGTCAAGTTTTCTCTATTCTATTTGTTTGACTTTGCTTATCATTGTTGATTGAATAGTCTATATTAAC AGAAAATTTTAGGATTATATACAAGCAGATATATTTAACTTAACATGCCAGACTAGTATTGCTAGGAATTATAGATGAAA TATCATTTGTATAACCGTCTGGAATAGTTTAACTGTATAACAGGACATCCCTATCTTTAATACAGTTAACCTAATGCATA ATTGATGATAAAATACAGGTTCAAAAGGGGTATCCATATATTTTCTGTAGGCTTTTATATTTACTTAGCATTTTATACTA GTATTGCTCGGAATTAAAAAAAGATAAATTATAATTTGTAGGGCCATTTGGGATAGTGAATCTATATAACTTGACATTCC CATATTTAATACAGTAAAGCTAATTGATGGTAAAATACAGATCCTAAAGGAGGGTACATGTTGTAACTTTTGTATGCAAG GCACTTATAATTTACCTTGGGTTATGGCATGATAGGATTTAGTACTGCTAGGAGCCTAGGAGCAGAATTTTTTATGCAAT ATCAACAATTAGCAGATCAGATGCCATCTAGTATTGACAATTCAACTGAACATAATCTATGGATTCCTTGTATCAGTTCT TTTATTACAAAATATATCATTGTTGATGTAACTTTGCGTGTATAATGTCTTAATTTACAAAATGTATCATTGTTGGTATA TATATATATTATATTCTACAGCTCTAGTCCAAAAATTCTGCTCTGAATTCCTGGCACATTTAACTTTGTTGATACTTTAA TTCTACAGAAAGAAGAACTAGGGTTTGAGCATCAGGAAGCATCTATCCCATCTGTCCCTGCTCCAGATGCTGTAAGTAAC AACCTTATATAGATTAGGAAAAAGTCACAGAAGAAAGATAGTCATATTGCTACTATCAATTTTGCACTATAGCATTTTGC TCTTTGTTATAGCTTCTATCAATGGAAGAGTTACGAGAGCAACGTTTAACTGACCCTCGTCTTCCTAGGTAAGATTTACG TCAAGCATATCCTGCCTGATGCAATAAATTTATGTTCTTTTTTTTTTTAGTCTGCATGGTGATTTTCTGTGCCATCATGA CAAATTTTGTTGCTTCAGAACTTACCGGAACAAAGTTGCTACTGCTGAATTCATTCCATGGCCCATAGAGATACGGTTCT GTGAACCGAAAGCATCAACAAATCAGACTAAATCTCCTCCTAGGTTAGCTGGATGCTCTCTGCCAATTTTTTCTTATGTT TATAGTGATCTTTTATGCTATGTTTAGCGAAAAAGATTTGGTAGGGGGAGAAAGGAAAGGATTAGTGTAGTCTTCCGGAT ATACCAATCCTTTGCCTCCCTTGTTCTGTAAATCATTTTTAAATGGCTTCAATGCCTGGGATTTAAATTCTACATATGAT CTAAACTTCTTGAAAATGTGAATGCAGTTTGAGATACTGGTTTCGAGCAAAAGGAAAACTGTCTGATGATCAGGCCTTGC ATCGGTACATATCTTCTTTTTACTGTTTGATATTGCAGTTTTAAGTTGTTTAGTGATGATCAGGAAAATGTATGAAATAT GAGGGCTTTTGATGAGAGATTTCATGCATCAAATTTCATGCAAATCTGTTTATTTCATGAAATTAGTACGAGTAAAAGCC CTCATATTTCCTGCATTTAAAATTTCAACATTGTCTTTGGAAAACTCTTGTGATGAGAAAGGACTGGTTTGGAGAGTTTG CGAAAATGAAGATGCTGAAATTTCAATTGGGTTGTACCAGCGCATCTAAGTTGAATCTTTTGAGGACAAATAATCCCAAT ACCAAAAGCTTACACTAAAAGTTGTTGAGTGAAGACTCCTGAATGATTTTATATCCAACATGTCCTCTCATGCACGTACA CTTTGCGCTTATGATGTACCAATTCACCAACCCATTTTACTTTGGTGAAATTCAACTCTTGCAAAGAAGAATGGGTAGGC AAGGTTCAAACTAATGACCTGTCGGTCATAATGATGACTATGATGGAATCAAGAACAGAGAAAGTGAATTGGCTTATTCA ATTGAACTGAAACAGAACCAAGATCCTCACAGTGAGAATCAATGGCTCTAGGATACAAGAATTGGGAACTACAACAGGGA ACTATGAACCCTAATCCCTCTGGAACTTCGAGAGTCCAGAATCTCCAACAAACTAACTGATTCTCTAACTCCCTTACAAA CTACCCTGTCCTTCTATTTATAGGACAGGATCCTAACTGCCAACTCTAACAGACTAGATACTAGGCTAGTCCTTATTACA TTGATAACAGAATATAACAGAATTAGGCTAAACAGCTGCCTTCTTCTTATTCCTTCTTTCATAGACCTTCTCTATTAGAG GACAATGCTCATCAGACTAATACCATGTCAGAAGCACTTTTCAAAAAACGTAAACAATAGGCTTATCAATGTCTTTATAT CCAATAATCTGTGTCTGCTTTGTATTGCAGTTGTGTGGTTGCATATACTTCAGATCTAATATTTCTTCAAGTAAGTGTGA ATCCCCATCGTCGTAAAGGCTTAAAGGCACGTGCTGTGAGTCTGGACCACTCGTAAGTATCTGAATCCTATTGGTTGTAT GATAGATCATTTATAAATTAACATAGTAACATGTCAGACTTACACAACAAGTTTTCAACCTGTGATTATAAATTTGCTTT CTTGTTTATTTTTTAAATGCTTTTCTATTTTTTCTTCAGCGTGTGGTTTCACAGACTTGTAAGAGCTGATGACTGGATAC TATTCGTGGTGAGTGTTTCGTTATTTTGGGAAAGTTACTACGACAAAATTATGGGTAAAAATAATTTCATCTAGGAACAA TTAACTTCTCAAATAGTTTTCTAAGTCAATAAATGATTACTCGTTAACCATGTATAAATAATCAGAAACTATTTGAGAGG TTAATTTGTCCTAAATTAAAAATATTTCTACCTATTATTTCTTTTATTGTATTTTTTTTTATCTTTGTTTCGTAAAGTTG TCAACCTATCCAATTTGTTCTTCAGATCTTTGCTCCTACTGCCTCTAATGCTCGTGGCTTTGTTACTGGCCAAATGTTCA ATCAGAAGGGAGAGGTAAGGATTACACCTGTTCAATTACTTCATCTATGACCTCTATCCTTTGTGTAGTGCAGTTCTGAA GGGTTTAACTTACCTTCACTTTATTGTGTGTGTGTTTCATACTTCTGTCAGCATATATAGGTTTCTTTCCCTGGTTCAAC TTTGTCTTAAAGCTTTTCCAATTTGTTAACTGGCAGCTTCTTGTATCATTGGTTCAAGAAGGTCTAATGAGGAAGATTAG TCCCGAAAATCCAGCGTTCAAATCCAAGTTGTGAACAGCTGAGAATGCAGGGGTACATGTAGCCTTCACTTTAGTTCTAT TTTGTTTCGCGGTGCTAGGCCAGGAGGGGTCTTGGTTGTCTGCTTTTATTATTTACATGTCTTCAAGATTTTCCTGCTAT GTAGGTCTATTGAAGTTTTATTAGCAATGTAATACATGATTTGTACATATCTGCCTAAATTATCAGCTGTTAAAATTCCT TTATATTTGGCAGAGACGAAAATAAAAGGGACAATGGAGGGTGAGCAATTGAAAATTGACCGTGTTGTATGATAGTTAGT ACGTCGTCAACTTTATTTAAATTTGCTGTTTGCTTTTTATGCACACTTGACACTTGTCTAGCCCTTTTAACTGAATTCTT GCCTAAAAAGAGTTTCTTTGGTAGTAAATGGAATACAATTTGGCAAATTCTGTGTACCCATAAATTTTTCTGGGTGTGAT ACCCACAATAAGTTATTTAATAGATTATTACTATGTTGTTCAACGTAAATTTTACATTTTCAAATTTTATTTTACTTTTC AATTAACTTCATTCCATAGAATTCACTTTTTAATGAAAAATGGACGACTAGTGAAGATGAACAATGGTGGTATCAATGCG CGTCAAATGACCATATTTGACGGAATAACAAAGGTTAAAAAACACAACAAATAAATTTCACGTCTCTAACAATGTAATAC TACATTACTATGATATAATAAAATCAAAC
CDS sequence (LotjaGi1g1v0475300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTAAGTGTAATGGCGAAGGAAGAAGTGTCTGAGTTTCTCGGTTGCGTTCCTCTGCTGCAGAGGCTTCCTAGCTTGTC TGTAAGGAAGATATCTGAACTCGTTGTTGTCAAACACTATGAGCCAGGAGAGTATGTTGTCCGTGAGGGTGAACCCGGGG ATGGTCTTTACTTCATTTTGGAGGGAGAGGCAGAAGTTGTTGGATCTGTTAGTGCTGATGACGAAAATCATCCCGAGTTT CAATTGAAAAGATATGATTATTTTGGTTTCGGTTTATCAAATGCAGTTCATCCTGCTGATGTCGTAGCTTTGACTAAGCT ATCATGCTTAGTGTTGCCACTTGAGCACTCAGCACTGCTACAGCCAAAGTCTATCTGGAGTGCCGAAAAGTCTGTTGAAA CATGCTCACCTGTGGAGAATATATTGCATTTGGATCCCATAGAGGTAGATATCTTCCGAGGAATCACCCCTCCAGATGCT CCAAAATTTGGGAAGGTGTTTGGGGGACAGTTAGTTGGACAGGCACTGGCTGCAGCATCAAAATCTGTTGATTGTCTTAA ACTTGTTCATAGCTTGCATGCCTATTTTCTTCTTGTGGGGGATTTTAACATACCAATTATTTATCAAGTTAGTCGTCTCC GTGATGGGAAGAGCTTTGCCACAAGGAAAGTGGATGCAGTTCAAAAGGGAAATGTTATATTCACGTTACTGGCTTCATTT CAGAAAGAAGAACTAGGGTTTGAGCATCAGGAAGCATCTATCCCATCTGTCCCTGCTCCAGATGCTCTTCTATCAATGGA AGAGTTACGAGAGCAACGTTTAACTGACCCTCGTCTTCCTAGAACTTACCGGAACAAAGTTGCTACTGCTGAATTCATTC CATGGCCCATAGAGATACGGTTCTGTGAACCGAAAGCATCAACAAATCAGACTAAATCTCCTCCTAGTTTGAGATACTGG TTTCGAGCAAAAGGAAAACTGTCTGATGATCAGGCCTTGCATCGTTGTGTGGTTGCATATACTTCAGATCTAATATTTCT TCAAGTAAGTGTGAATCCCCATCGTCGTAAAGGCTTAAAGGCACGTGCTGTGAGTCTGGACCACTCCGTGTGGTTTCACA GACTTGTAAGAGCTGATGACTGGATACTATTCGTGATCTTTGCTCCTACTGCCTCTAATGCTCGTGGCTTTGTTACTGGC CAAATGTTCAATCAGAAGGGAGAGCTTCTTGTATCATTGGTTCAAGAAGGTCTAATGAGGAAGATTAGTCCCGAAAATCC AGCGTTCAAATCCAAGTTGTGA
Protein sequence (LotjaGi1g1v0475300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVSVMAKEEVSEFLGCVPLLQRLPSLSVRKISELVVVKHYEPGEYVVREGEPGDGLYFILEGEAEVVGSVSADDENHPEF QLKRYDYFGFGLSNAVHPADVVALTKLSCLVLPLEHSALLQPKSIWSAEKSVETCSPVENILHLDPIEVDIFRGITPPDA PKFGKVFGGQLVGQALAAASKSVDCLKLVHSLHAYFLLVGDFNIPIIYQVSRLRDGKSFATRKVDAVQKGNVIFTLLASF QKEELGFEHQEASIPSVPAPDALLSMEELREQRLTDPRLPRTYRNKVATAEFIPWPIEIRFCEPKASTNQTKSPPSLRYW FRAKGKLSDDQALHRCVVAYTSDLIFLQVSVNPHRRKGLKARAVSLDHSVWFHRLVRADDWILFVIFAPTASNARGFVTG QMFNQKGELLVSLVQEGLMRKISPENPAFKSKL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 2 | 124 | 123 | 1.1E-21 | ||
| SUPERFAMILY | 9 | 116 | 108 | 6.28E-21 | ||
| SMART | 19 | 136 | 118 | 1.7E-12 | ||
| CDD | 19 | 116 | 98 | 8.89003E-20 | ||
| ProSiteProfiles | 19 | 89 | 71 | 15.976 | ||
| Pfam | 38 | 115 | 78 | 8.6E-13 | ||
| PANTHER | 40 | 433 | 394 | 2.3E-243 | – | |
| PANTHER | 40 | 433 | 394 | 2.3E-243 | ||
| ProSitePatterns | 46 | 62 | 17 | - | ||
| Gene3D | 132 | 422 | 291 | 2.2E-96 | ||
| SUPERFAMILY | 134 | 244 | 111 | 5.33E-32 | ||
| TIGRFAM | 142 | 420 | 279 | 2.1E-92 | ||
| CDD | 150 | 242 | 93 | 2.31168E-41 | – | |
| Pfam | 164 | 419 | 256 | 2.3E-56 | – | |
| SUPERFAMILY | 249 | 421 | 173 | 2.34E-44 | ||
| CDD | 317 | 419 | 103 | 5.45659E-42 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Acyl-CoA metabolic process | The chemical reactions and pathways involving acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with an acyl group. | ||
| Molecular function | Acyl-CoA hydrolase activity | Catalysis of the reaction: acyl-CoA + H2O = CoA + a carboxylate. |
Expression pattern of LotjaGi1g1v0475300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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