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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0483700 |
| Transcript ID | LotjaGi1g1v0483700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Haloacid dehalogenase-like hydrolase family protein; TAIR: AT1G79790.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; Swiss-Prot: sp|Q9S586|GPH1_PSEAE Phosphoglycolate phosphatase 1; TrEMBL-Plants: tr|I3SMA5|I3SMA5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0483700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:99711960..99721271) extracted from Lotus japonicus Gifu genome v1.2.
AAATATTAAAATGAAACAACATTGAAATGTTTTCTTGAAGAAAAGCAACATCAAACAACATGAAATGAGTTTATAGATGA AAAATGAAAATGGTGTCAATGAGTGTGGGAATGCCCTCAATCTCAAAATGTTTTCTTTTCAACACAGGATTAAGAACACC AACAACTCGTTACTCTGTCAACTGCACCTTGAAACCTTCACTTTCAGCTTCAGTCACAAACATGGCACTCCCCAACACTA CCAACAGGAAGCTTCCCATTCTGCTGTTCGACATCATGGACACTCTCGTTCGTGACCCTTTCTACGAGGATGTTCCTGCT TTCTTCGGAATGTCTTTTAAGGAACTCATCGATTGCAAGCACCCAACTGCTTGGCTTGAGTTTGAGAAGGGTTCCATTGA TGAGGTAAAACCAACTGTGATTGATACAATACAATTCACTGCAAACTCTGCACCCCTCTTGCATGTTATGTATAAAGATC AAAGCTTTTTGGATTTTGAATTGAATTGCAAATTGGGTATTTGAGGGATTTTCAAATTTTTGAATTGAATTGCTTATTTC CTCCTCAACATATTATTTAGCCATTTCTGGGTAAAGGGTCACTTTGAATTTTCTAATATTATGTTCTTGCACAGAATGGT TTGATGGTTTCTGCTTTCAACAACATTTTTGAATTTTTCTTATCAATCTGTCTTTTTATTCCAGATGGAGCTAGCAAGAA TATTTTTTAAGGATGGAAGGGATTTTGATTTAGAAGGTTGGTCTAAGATTTTTGTTGCTAGATAGAGCTGATCATTTAGT ATCAATCATGTGTGTGGTGAATTAAACAGATAAGTTCTATAGATTGCTATACATAAAAATAATCATTCATCAAGAATTGC AAGTCTGCAGCTAGCTTATTTTGATATTGGCTATGGTTCTCTCATGTGGTCTGCAGTATTATATACACTCCACAGTCCAC AACATGTTATCTTTACCATGACCTTTGCTAAAAGAATGTTTAGGTCTTTTTGGAACTGTAGCTGACTAGCAGTTAATGTT TTTCATTCAAAGCTCAAGTTGGTGATGGGGCCGCTACTCAATAGCAATCTGATGTTGGAAGTAGCAATAATATATTTTTA GCAATCTGATGTTGGCAGTACAACAATCTTTGAAGTGAACTTGTCTCAAACCATGGGAAATTTTGGGCTTGCATTAGTTT CCTATTAGTTGATTTCTTGTTTATTACCTGCTCAACCAATACATACCAGTGTTGTCAAATCGCGATCGCGGACCATCGCG GTGAGCCAAAAATCCGCTATTTCGGCCGCTATTTAGAGGCGAATAGCGGGAATAGCGCGCTATAGTGGGAAATAGCGGCG TATTGACTAGCCAAAAATCCGCTACGCTATAGCGGCGTATAGCCGCTATTTGATAACACTTACATACCGTAAATCTTGTT GTAGAAACTCAAAAGGTCATATTTAAAAAGGTGTGAAATTGTTTGGATGCAAGATATGCTGTCAATGGTAACTATATTTT GAGTTGCTTTTAAGACATTGTAGATTAGTACTGTTTTTAGGGTGAACTGTAGTAGTACTTCAGTGCCGTGAACAAGGCCA TGTTTCCCATATATATATGGATATGAAATGACACAGTCACGGAGATATGGCATTTTAAAATAGCTAGTAGAGATTGGTTC ATATTTTTAGCGTCAGCATTGAAATTCAGTCAGAGCACTCCTAAAGTACCCTGAATGTATTGTGCTACAATCCCCCTACT GACTTGCATGTGTGTTTCTAATTCTCTGACAGGCCTTAAAACTTGTATGAGAAATGGATATTCTTACATAGACGGCATTG AACAATTGCTTTTTACCTTAAAGCAAAACAACTTTGAGATGCATGCTTTTACAAACTATCCTACATGGTAAGGCAGTTGC TCTTCTCTTATGATTTCTGTTTATCTTTTCATGGCATTCTAAGGAATGTTTTGTATTGTAGGTACCAGTTGATTGAAGAC AAGTTAAAGCTATCCACATATTTATCTTGGACATTTTGCTCATGCACACATGGTATAATATATAATCTCTCTGATGAACT CATTGAAATGCTACTGGTTTATTGAAGAAAACAGAGACTCAATCCTCAAGTACTGAGGTTGAATTCTCAGGAATTACACA GAAGAATCAAGAACACTAACAAGAACCCTAGCCTCTGGAATTCGAGATCCAGAATCTCCCAAATCCTAACCAACTGAATA ACTACCTGTAACTTCCCCCTTTCCCTTATTTATACTACTCAGTAGTTCTAACAGAATCACAACTATTAACAGAATTAGCC AGCTGTACTCTAACAGAAACAACTAACCATGCCAGCTGTTTATTAACAGATCAACTAACAATAACAGTCACACTAAGTTG TGACTTTCCTCTTGTTTCTTCTCTCATACACCTTCTTAATTGAAGGTCTATGCTCATCAATACCCCCCCCTAAAAGTTTC ACCTTGTCCTCAAGGGGAAAATCAGGAAAAGCTTCATGGAGCTGGGCAGCAGATTCCCAACTGTTCTCACAAGCAGGTAA AGAGTGCCACTGAATTAGCACCTCAATCTGGCCCATTGTGGTTTCCCTAACAGCCAGCACTAATGCAGGTTCCACCAAGA GCTCATGATCTTCATTCAAGGCTGCTGGGAGAGGTTGAGGCTGAAAATTAGTCCCCACAGCCTTCTTGAGGAGAGAGACA TGAAAGACAGGATGCACTCTACTGTGAGCTGGTAGCTCAAGTCGATAAGCCACAGCCCCAATCTTTGCTACAATAGGATA GGGTCCATAATACCTAGGACTCAATTTTTCATTCATTTTCTTGGCCAAAGACCTCCTTCTATAAGGTTGTAACTTGAGAA AAACCTCATCACCAATTTGATAATCCACATCCCTCCTCTTCTTATTTGCATATGTCCTCATCATGTCCTGAGATTTTAAA AGATTAGCTCTCAGATCTGATAGCAATTCATCCCTCCCCACCTGCAAATCATTTACTGCAGCTATCTTGGAAGGAATTGT AGTCCCTTGAAGAAGCACAGGTGGTTCCCTACCATAAAGAGCTTGAAAAGGAGACATTTTGGCAGATCGGTTGTAATTGC TGTTGAACCAAAACTCTGCCCAAGGAAGACAAGTAACCCATTTCCTTGGCCTGGATCCAGTAAGGCATCTCAGATAAACT TCAAGGCATCTATTGACCACCTCAGTCTGGCCATCAGTTTGAGGATGGTAGGCTGAGCTAAACTTAAGTTGTGTGCCTGA CACTCGGAACAGTTCCTTCCAAAAACTACTGAGAAATAAAGAGTCTCGATCTGAGACTATGGTTGTTGGGAACCCATGAA GTCTCACTACCTCATGAAGAAATAAAGCTTCCACTTCAGGAGCTGTAAAAGGGTGCCTTAAGGGAATAAAATGAGCATAT TTTGTCAGCCTATCCACCACCACTAAGATTGTATCCTTGCCATTAGATTTAGGCAAACCACCAATAAAGTCCATGGACAC ATCTGTCCAAACCTGAGTAGGCACAGGTAATGGCTGAAGCAGCCCTGCAGGGGAGAGATTGTCAAATTTGTTTCTTTGAC ATGTGTCACATTCTGCCACAAAATCTCTTATGTCACTCTTCATCCCTTCCCAATACACCACTGCAGCCAACTTTCTATAG GTTCTAAAGAACCCTGAATGTCCTCCCAACAAAGAAGCATGAAACTCTTTGCAAAGAATTGGAATCCTAGAAGATTGCTT GGACAGAACCAACTTTCCTTTATAAAACAACCTGTGATCCTTCAAAGTATACCCTTTATGAGCCTCAGGATCCACAATCA GATCTTGTACAATGGCCTGTAGCTTGGGATCTTGCAACATCTCAGTTTTCCACTCCTCAAAGTCATTCACCTTAAGAACT GACAATGCACAATATGAGCTTCTCCTGGACATGGCATCAGCAGCTGAATTGTCCTTCCCAGGCTTATATTGTATCTCAAA GTCATAACCTGAGAGTTTGGAAATCCATTTGAACTGCCCCTCTCCCACAACCTGTTGCTCAGTAAGGAACTTCAAACTCT TTTGATCTGTTCTAATTATGAAATGCCTTCCTAAGAGATAATGCCGCCACCTTTGGACAGCTCTGACCACTGCCATTAAC TCTCTTTCATAAACTGATTTAGCTTGACTTCTATCTGAGAGTGTAGCACTCCAGAAAGCCAGAGGCTTCCCTTCCTGAGT CAAAACTGCTCCTAGACCAGTACCTGAAGCATCTGTTTCCAGAACAAAGACCTTGGAAAAATCTGGAACAGCCAAAGTAG GTATCTCTGTCAAAGTGTGCTTAAGAGCTTCAAAAGCCTGTTGGGGACTAGGTCCCCACTAAAAACTATCTTTTTTCAGT AGCTGTGTCAAAGGCCTAGCTATCTTGCCATAATCCTTGACAAACCTTCTATAGTATCCAGTAAGACCTAGAAATCCCCT TAAGCTCTTCAAGTCTTTAGGGACTGGCCACAACCACATAGCTTCCAATTTCTTTGGATCAGCTGCCACAGTTCCAGCAG ATAACACATGTCCTAGATATTCAATCTGGCCCCTTCCAAACACACTCTTCTTACCATTGATTTTAAGATCATGTTGGTCC ATCAATTGCAGAACTTGTGTCAAGTGAACAACATGTTCCTCCATGGTCAAACTGTAAATCAAAATATCATCAAAAAAAAC TAGAGCACACTTTCTCAAAACTGGTCTCAGCACCTCATTCATCAGAGACTGAAAAGTGGAAGGAGCATTGGTGAGGCCAA AGGGCATCACCAAAAACTCATAGTGGCCCTCATGGGTCCTGAATGCTGTCTTTTCCACATCCTCTGCCTTCATCATAATT TGATGATATCCTGATTTCAGATCAATTTTGGAAAACACTCTAGCTGGACCAATCTCATCTAAGAGTTCATCAATGACTGG AATAGGAAATTTATTAGGGACTGTGATTTTGTTCAAAGCCCTATAGTCTACACAAAATCTCCAGCTACCATCTTTCTTCC TAACCAAAATCACTGGACTTGAATATGGACTAATACTAGGTCTAATGATTCCAGCATTGAGCATTTCAGCCACTAACTTT TCTATTTCATTTTTTTGGTAATGGGGATACCTGTAAGGCCGAATGTTGGGAATGGATGCACCTTCTTTCAGATGAATGGC ATGGTCATGTCTTCTCTGAGGGGGCAATTCAGTAGGTGCTGCAAACAGTGCTGGAAAATCTGACAAAACTGCCTTCAACA ACTCTGGAGTTTCCTCTGCTTTAGCCACCTCTTTTTCTAACATTTGATATTGAAGCACATATCCCTCTCCCTGCTGTTGA ATGGCTTTAACCAATGCATTCATGGAAGCTCTCTTCTTCAGCAATTCAGGCTCCCCTTTGAGGACTACCTTTTTATTTCC CAGTTTGAACTTCAAGGTCAGCTCTTCAAAATTGGCTTTGATGTCCCCCAATCCTGCTAGCCATTCTAGACCAAGCACAA CATCCACTCCTCTTAATCCAAACAAAAAGAAATCTTGAGTTACCACAAATCCTTGAATCTGCACACTGAGATTCTTACAC ACCCCCTTGCTTTTCACTACATGTCCATCCCCTACTTCTACTGTGTAAGCTGGAGTTTCTGTAATCTGTAACTCCATTTC TCTTGCCAAGGACTGAGAAATGAAATTATGTGTTGCTCCACAATCTACCAGCACCACTATGACAGTTCCTTTCAATTTTC CCCAAACCTTGAGAGATTTCCTTGAAGAAATTCCCTGTATACTGTTTAGTGACAAGTGCTTTAACTCCATAGCTTCCTCA ATTTCTTCAGTGAGAGGCTCTAGTGTCTCAATCTCTTCTTCCTCACCATCATCCCTCAGCAACATTACCCTGAATTGCTT ATTCTTACAGATATGGTTTGGTCCAAACTTTTCATCACATCTGAAACACTCCCCCTTTCTCAACTTTTCCTTCATCTCTT CCCCAGTGAGTTTTCTGTAAACTCCTCCCCTGGCTGGCTTACCTCCTACTCTCTCATTAACACTACCACTAGATGATTGC ACTGTGCCCTGAGTTACACTACCACTACCACTTTTCTGTCCAGTATCAATTTGCACAGATTTCTGAAAAGTTGTGGATCT AAAAGGTGGTTTGAAAGAGGAATTATACCTGCTAGTACTGCCAATTCCAGCCTTGCTCACAGCCAGGTTCTTCTGTTCCA CCATCAAGGCTTTCTTGACCATGATTGTTAGGGATTTGGGCTCATAGAGCTTGATTTCTGCTGCAATTTCCTCCTTGAGT CCATTAACAAAAATATCCATGTAATGCTCTTCATCAATTCCCTTGAGCATTCCTGCAAATCTCTCAAATTGTCCTACAAA CTCTTCAACACTACCTTCTTGCTTCAAGGCCAGCAAAGCCGCAAATGGACTAGAATTCGAGGTGAGTTGAAATCGTTCCA GCATGGCTTCCTTGAACTTGGTCCAAGTAGTCACCTGGTTGCAGGTTTCCCACCATTGGTACCAGCTCAATGCCTTTCCA TCCAAGGCCACCATAATCGCTTGTACCTTCTCTTCCTCAGTCGCTCCCTTCAGTCGGAAGTAGCGTTCCAATTTCTGAAT CCAACTGTACGCATCTTCTTCACCCTGGAAAACTGGAATGTCAAGCTTCCTCCAACGCTCTGTTTGTGCATTTGCAGTGC GCTGAAGATTCTCTCGCGCATCAGCTTCGTCTCTTACGCTTCCCGGTTGTCCTCCGTTCACGGTGCGCTCCTCCTCCATT CGTCGGCGTTCTTGCTCGCCGTCGCTGTCGCCGTGCTCGCCGGCTCGCCGGCGCGTCATCGTCTCGACAATCGCTTCCAG ATTGCGAAACCTCTGCTCCACGCGTTCATGCTCGATCGCACGCTCTCTCCGTTCTTCGTCGCGAATCCTCCTGTCTTCTT CGCGATTCCTGCGTTCTTCCTCGCGATCGCGATTCAGAACCTCAATGAATCTCTCAATCGCTTCCACTCTGGCTTCCATT CTGCTCGCTACCATAGACAAATCGATACCACAGCTCCTGGATGGAGCTCTGATACCAATTGATGAACTCACAGAAATGCT ACTGGTTTATTGAAGAAAACAGAGACTCAATCCTCAAGTACTGAGGTTGAATTCTCAGGAATTACACAGAAGAATCAAGA ACACTAACAAGAACCCTAGCCTCTGGAATTCGAGATCCAGAATCTCCCAAATCCTAACCAACTGAATAACTACCTGTAAC TTCCCCCTTTCCCTTATTTATACTACTCAGTAGTTCTAACAGAATCACAACTATTAACAGAATTAGCCAGCTGTACTCTA ACAGAAACAACTAACCATGCCAGCTGTTTATTAACAGATCAACTAACAATAACAGTCACACTAAGTTGTGACTTTCCTCT TGTTTCTTCTCTCATACACCTTCTTAATTGAAGGTCTATGCTCATCACTCTCTCCTCTATGACTTTTATACTGATCATCT TTTTATTTGATGGACAAAACAAATTTATGATTCTACTGTCTCCTAGTTGAAGTTTTTTGTTTATTATTACTGAGGGTGGA AGAGTGCATTCAAAATATGCTGTCATGAAAACCTTTTATAAACCCATTTATATTGTGTTTCAGGAAAGAGGAAGCCTGAT ACTGAATTCTATATGGAAGCTCTGAGGCATCTTAAAGTTGATCCAGCATCTTGTATTTTTGTAGATGACAGGTTCCTACT CTTTCTATATACCAGATCATTTATGGAAATTAAACCATGGTTACCATTTATCTGTAATAAATACACATATACATTTGTGT ACAATGCATATGTTCTAGCATCTTTTAAATGTTTTCTTGTTTAATTATTCCTGAGAAAGGAGTTGTGGGATGTTGGTAGG TACGTCCTAAAGCGTGATAAAATTTGGTTTTTTTTTGGGAAAGAAAGTGGTAGGGCTTGGAGAGGCACCTCCAGGCTACA GGATGGTGCCAATGGCATGTTGGGGATCTCCGGCGGGGAGGATCGTCTTCTCTCTTTCCCTGTGGAGGCCAGCAGATGCC ACTCCATGTGCTGGAGTGCCAGGGGATCTCCCTGAGTAGGAATGTTCACCAACTTGAGGTTTTTTGTCTCCAGGGGGATT TGAACCCACACCCTTGGGGTTGAAGCTCAAACCTGGGTGTGGTTTTTGATTGAGCGCAATAGCGTCGAATGATCCATATA ACCGACCTCAATTAGTGGGATAAGACTTTTGTTGTTGTGGATGTGTAAATAGTGTGAAGTGGATTGGGACCTAGACTTGC TGCAGTCACCTCAGTAAGAAAATCAGAATCGTTGAATGGAAATCGGACAACCTAATTTTAATCGCAGTGAATTGAAATTA ATATTTAATCAGGAAATCCAAACCGTCCAATCTCCGCTCAACGGTTACGATTTGATGATTGTAGTGATTGGACTATTTTT CATTACAAATCCCAAACTCTTGAACTAATTTATGTTTGTGATTTTTTGGGTTATCATCTCAGGAAAAGAAATGTAGAGGC AGCAACTGAAGTTGGCATCAGAGGTGTACAGTTCAAGAATGTTAATTTACTGCGTGAAGAGCTGTCATTGATGGGGGTTG ATATTTCAATAGGTCAAGATCGATAGCTTATTTTCTTTGATTGTCTTGTTTGAACTACACCAATAAACTTCCCTAGGGGA AAGGGGATATTCCATCATTCTTAATTGTATATTCAATTCATATCATGCTAATAAGCATTGTTGAAATGACTTCTGAATTT TTTATCCTTCCAATGATCTTTCTAGTTCTTCTCAGCTGTTGAGGGTGCTTATAGGAGTAAAAAAATCAAGTAATTGAGTA GATTCAATTTAAAGACATGGTGCACCCCTTCAGACCAGTGAAGTACAGAATTGGATTAGATTTACTAGTTATCATTGGTA GATATTGAAACTTTTTATCCCAAGAGTTAAGCTACACAACCAATTTTTTGCTTTTTTTCTTCTTCTTGTTCAGTTTTGGT TTCTGTTCCTGCATCTTGGGCCCTTTGGGAAATAACTAGTTAAGAGCTTTTGGCAATAAACACACTTATTCTTAAATTTA TCCGAGAAATGTATTGAAATAAACTCGAAGTAACTTATAGATAGATTATAAGTTATTTCATTAGCTTAACCAAACATTTT GTTCAGATGTTTATATTGTAAGAAAGTTAAATAAGCTTCTCCTATGTTTCAATTGATGAAAGAGATAAAACAGACATAAC ACCATGAAATGCCATTTTGCAATTTGCAATTG
CDS sequence (LotjaGi1g1v0483700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAAATGGTGTCAATGAGTGTGGGAATGCCCTCAATCTCAAAATGTTTTCTTTTCAACACAGGATTAAGAACACCAAC AACTCGTTACTCTGTCAACTGCACCTTGAAACCTTCACTTTCAGCTTCAGTCACAAACATGGCACTCCCCAACACTACCA ACAGGAAGCTTCCCATTCTGCTGTTCGACATCATGGACACTCTCGTTCGTGACCCTTTCTACGAGGATGTTCCTGCTTTC TTCGGAATGTCTTTTAAGGAACTCATCGATTGCAAGCACCCAACTGCTTGGCTTGAGTTTGAGAAGGGTTCCATTGATGA GATGGAGCTAGCAAGAATATTTTTTAAGGATGGAAGGGATTTTGATTTAGAAGGCCTTAAAACTTGTATGAGAAATGGAT ATTCTTACATAGACGGCATTGAACAATTGCTTTTTACCTTAAAGCAAAACAACTTTGAGATGCATGCTTTTACAAACTAT CCTACATGGTACCAGTTGATTGAAGACAAGTTAAAGCTATCCACATATTTATCTTGGACATTTTGCTCATGCACACATGG AAAGAGGAAGCCTGATACTGAATTCTATATGGAAGCTCTGAGGCATCTTAAAGTTGATCCAGCATCTTGTATTTTTGTAG ATGACAGGAAAAGAAATGTAGAGGCAGCAACTGAAGTTGGCATCAGAGGTGTACAGTTCAAGAATGTTAATTTACTGCGT GAAGAGCTGTCATTGATGGGGGTTGATATTTCAATAGGTCAAGATCGATAG
Protein sequence (LotjaGi1g1v0483700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKMVSMSVGMPSISKCFLFNTGLRTPTTRYSVNCTLKPSLSASVTNMALPNTTNRKLPILLFDIMDTLVRDPFYEDVPAF FGMSFKELIDCKHPTAWLEFEKGSIDEMELARIFFKDGRDFDLEGLKTCMRNGYSYIDGIEQLLFTLKQNNFEMHAFTNY PTWYQLIEDKLKLSTYLSWTFCSCTHGKRKPDTEFYMEALRHLKVDPASCIFVDDRKRNVEAATEVGIRGVQFKNVNLLR EELSLMGVDISIGQDR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 14 | 14 | - | – | |
| Phobius | 1 | 24 | 24 | - | – | |
| Phobius | 1 | 7 | 7 | - | – | |
| Phobius | 8 | 19 | 12 | - | – | |
| Phobius | 20 | 24 | 5 | - | – | |
| Phobius | 25 | 256 | 232 | - | – | |
| PANTHER | 51 | 252 | 202 | 1.2E-93 | – | |
| PANTHER | 51 | 252 | 202 | 1.2E-93 | – | |
| Gene3D | 58 | 247 | 190 | 2.0E-31 | ||
| SUPERFAMILY | 60 | 243 | 184 | 1.51E-29 | ||
| Pfam | 133 | 229 | 97 | 2.3E-12 | ||
| TIGRFAM | 182 | 231 | 50 | 1.1E-10 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. |
Expression pattern of LotjaGi1g1v0483700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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