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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0483800 |
| Transcript ID | LotjaGi1g1v0483800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Methionine import ATP-binding protein MetN; TAIR: AT1G65410.1 non-intrinsic ABC protein 11; Swiss-Prot: sp|Q9AT00|TGD3_ARATH Protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic; TrEMBL-Plants: tr|I3TAB8|I3TAB8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0483800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:99725522..99733043) extracted from Lotus japonicus Gifu genome v1.2.
CATCTAGTTCCCTATATTGTTTAGGATCCTACTCTTAAGACCCTCTCTCCTCTTTGTGGGAACAAATTTTATTATATTTA CAATATTTTATGCAAATAGTTAAAAACTTTCCATCTCTCCATCCAATAGGATCATGTCCTAGATCTTGTTACATAAAAAG AAGATAAAACTCCATATAAGTTAGGACCATGTCCTTAACAGTAACAAACACACACACACAGAGACAGAGGAGAATAGAAG CAACCCAGAAAGTAGCATCATTTCTTCCTTCACTCTCAAAATCACCGACCAATTCCCCTATTTGACTATGATTACCCTTT GAATTTGAAAATTCTGAACTTTCTTCCCCACTCACCCACTCACCCACCCACATGAATCACATGCTTCACACCCTATAGCT CAACTCAATCATTCTCTTTTTCTATCTCCCTTTTGCTCCCTTCATTCCAATCCTTCTGTTGTTTCAACCATGGTTTCGCT TTCCACCAATCCCTTCTTACCCCTCACAGCAAAAAACGCTTTCTCTTCTCTTGCTTCCACTAGATTTCCACCTGCAAACA GGGTGAACCCGCTCAAGCCCAGTAAGGATCACAAGAAGGTTGTCTGTGCCTGCATCGCCCCACCAAGAAACTTCAACAGC CAAGACTCTTCCGCCATTGAATTCAATGTAACACCACACACCCATTTTTTGATGCATGATTTGTTTCTCCTTTGTTGTTG TTGATGCATTGCAAGTTTCTTGATTTTTGCTTTTTTTATTGGTTTTTTGAGATGGGTTTGGTTGCTAACTAGCTTTGGTT TTCTGGGTAGTTGCAAAGTTCTGTTTTTTCTTTTTGGTTCTTTCTGACATGATGTGTGTTACTAGGGTTCATCGAAGTCA GAACAGCTAAGCACGTTGCGGGATCATGAGGATGATTCTGATGTTCTTATTGAATGCAGAGATATCTACAAGTCTTTTGG GGAAAAGAAAATCTTAAATGGTGTTAGCTTCAAGGTGATTTGGTTTTACACTTGGTCCTTGTCCTTTGGCGTTTTGGTTA AACTGTTTCTTTGTTGTTCATTGAGTTGAGTGTGATGTAGATGTAGTATAAAGTTAAATTATGAATACTTATGACCATAA CCAAGCCTTAATCCCTCAAGGTGGGGTCTAATTAAGCAAGCTCTTTTGGCTCTATCGAAAACCAAATTTTTCGAAAAATT TATGTTCAAATCATGTCTACTAAATGAAAACTACTAGTTGCTATTGATAATTGGAGGAGGCCTTGCTGATTGCGAGCTTA CTGAATCTTTCCACCTATTCTTTTGACTTTATGAATAGATCAGACGTGGTGAAGCTGTTGGAATAATTGGTCCTTCTGGG ACGGGGAAATCTACAGTGTTGAAGATTATTGCTGGACTTCTTGCTCCAGACAAAGTAAGTATCTGGTTTGAATGTTTAAT TTTTATTTCAAACGAGTACTTCATTTCTTGAGTGTTGGGGTTGTTAAATGAACAGGGGGAAGTTTACATCTGTGGTAGAA AGAGAGTTGGTTTGGTAAGCGACGATGACATTTCTGGTCTTCGGATCGGATTGGTAAGTTTTAGAGTAATATGCAATATG CTTATTCTTAAGTGCTATTACTTTTTTTTTGTAATTTTAGTTACTTTTCTGCATACAGGTGTTCCAAAGTGCAGCACTTT TTGATTCTTTGACTGTTCGTGAAAATGTTGGTTTTCTCTTGTAAGATGTGGGCTTAATCTTTTAAACATTGTTGTCTAAA GGGTGATAACATTGATGGATTTAATTGACTTTCTGACTTTATGTTCCTTTTCCTTGTTGTTCCCAATCATGTTAATTGTT CAGGTATGAGCACTCAAGCATGTCTGCGAAAGCGATATCAGACGAGGTCAAGAAAAGCTTGGCTGCAGTTGGATTGGAGG TATGCATCTTATAGGTGTAATGGTTGGTTCAACCATTGACATCAGGCACCAGATACTGCATTAAAGAGTAGCAGGAATAG TGAACATTTTCATTTTGCCATTCAGAATTTTGTTCCCTATACGCACAACTGGGTTATTTTGGTTTCATAACCATCATGGT TTATACACATAGACTAACTCTTCACTCACCCTTTCCTGTAGGCGGGAGTTGAGGAGAGGTTGCCTTCAGAGCTATCAGGT GGGATGAAAAAGCGTGTTGCTTTAGCTCGATCTATTATTCATGACCCCAAGAAGAGTTCAGAAGAGCCAGAGGTATGTAA GCGTTAATGCTTAAGTTCTCAGCCCTCCCTTAGATTAACCACTACTTAAGGCCAGTTTAACATTGTTAATTATTGTTTGA AATGTTTATTACTAGGTAGGATTGTCTTAGAACATGCATTTTGTTTGGTGATGTGTTTCATCTATAAATGTATGTTCATT TGATAAAATTATTTTCAATTTTCAATATATGTGTATTGTCTTTAATCTTCAATTTTTTATAGATGTAGTCCTAGTTAGAG AGTCGAGCGAAGAAAAAAGAGTTGTTGAGATAACCTTTGGAAGCACATAGATCCTAGTTTGGAGGCAAAAATTGGATAGT ACACCGCACCGCAATTGCATGATTTAAGTATCTTTGGGTCCATCATACAAAACGACAAGAAATAAAGCTTAGTGTCAATC ATAAAGTAGGGTGGATGAAATGGAAAATAATTGTGACATAAAAGTACTCCTTAGGCTTAAAGGAAAATATTACGACACTA CTATATGACTTGCAGTTATCTAAGGGACTAAAAGCTAGATGGTAAAGAGACAACAAGAAAATAAGCTCAATGTTGTTGAT ATGAGAATGCTAAGATGGATGAGTATTCATACAAAACAAGGATCAGGGGTGAAAGCACCGGAAGAAAGTTATGGTAGCAC CCATTGTAGAAAAAATGCTGTAGGGTCTTTTCTTCGGTGATCTGTATATGTGTAGAGAAGACCCATAGCTAAAGAGGCTA GAGAAGCAAGATGGAAGATAGTCTATTAGTTCGAGGCAGAGGGAAGAGTAAGGAAAAAATATAATGCAAACTATTATATT GTCTTTCTCTAGACATGCTTCATGATGCGCTGTTATATCATTGTTTAATCCTTGTAGTGACCCCACGTTGAGGGTATAAG GCTTTGGTTGTTGTATGTATGTATCTTCAATCTTCAATTCTAATAGAAAGGGAAGAATATAGAAGAGTATTTGGGTTTAG AGTGGAAATTGGGAGGGAAAGTCCTGGTCTCTTGAATAGTTTGGAGGTTAGAGAGTGATCTTAACAACTATATCATGATT ATGTTCTGGATCGCATTGATACTGTATTGGAGGCAGTTTTTACAATAAAGGTGTTTCCATTGTGTTTGTGAACCTGTATC TGTCAATTAGTATTAGAGCTCCCAAGATCCTCAAAGCTGCAATGGTTCTATAAAAAAAGAATAAGCATGATAGGAATTGA AAGATGAAATAGAATTTATTCAATAAACACTGGAAATTCGAGAGTCCAGGTCTCTCCTAAGTCCCAAAGTACCAATTTCC CAATACCTGAATGCCCTCCGCTATCAGATTTGCCCCCTATTTATAACAATTGAACATACCCATTCCTAATAGTCATAACA CTCCTTAACAGTCACATATGTTCAGGCATGACTACTCCTAACATCATAACTGTTCATAACAGTCACGTCTATTCAGGCAT GACTACTCCTACCAGTCATAAATAACTGTTCAGGCATAACTGCCGATAAGCCAACAGTCGTGCCCCCTTGTCTGAAACCT GCCCCTGAGGATAATACAAACTATCCCCTTGAAGACTATGTGAACCTTTTCTGGGAAAGTATTGTTAACACATAAAAGAG GGGCCAGTCTCAGTTGGTTAGTCGGTTGGGATGATTAGATAGTTTAAGAGAGAGAGCTGATCAGGTATACATAATAGGAA GGGAAAAATATGGGTCCTATGCATCTTTGGTTTTAGAGTGAGAATTGGGAGAGGGAGAGAGAGAGAGAGAGAGAGAGAGA GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTTCAAGTCTCTCATGGTGAGATTAGAGAGTGATCTCA ACAGTGTATCCTATTGGCTTGGATCTCAGTTCTGTAACATGATGATACTATATGAGGGGCAGTTTCTGCAAATAAAGGTG TTTCCATGTTTTCAGAGCCAGTATCTATCAACGTGATTCATGTAAAAAACAAATATGTAACTTCGGTGAGACCAGTGATT TGGGCTTCTGAAAGTTATTTTCTTGTAACTGCAGGGTAAAAATAAAGTGCAATTTTATAGTTGAGATTCATAGATCTCGT GTCAGTTCCTGGCACTTATTATTATTACTATTTTATAATCCAGTTCTTTCTCTTCCTTATTAACATTATATTTGGAACTG TAAATAACAACTCAGTTGAGAGGTGTAGGATGTCTTGAAACTGGAAGAATTCTGAATAATTGATTAATACTTAATAAATT ATGGATTCAGAAGTACAACATTTATAGGTTTCCTAGTCAACTACAAAGTCTAAACAACAAAATCTAATCAATAAAATCTT ATATTTATCCTAATATATCATAACAGAATTGTAACATAATAAAATCTAATCCTAATATATCAAGACTGAAACTTACGAAG ATGACGTTCCAAGTTTGACAAGGGCGTCATCTTCAACACCTGATGACTGCATAAAGTCGGCCAAGTTCACTGAAAAAGAG CGCCTCGAACCACGAGGCATGAACTAAACAATGAACCACGAAAGGGATCATTTGCTAAACCTAACAACCACAAACTAGAG CAAACCAAGGATCACTAACCAGTAACCACAATCGAGAGCGATGATAGATCGTTCACTTAAGTAGCCACAAACTAATGATC ACTAACAACGAACAAGAGCGATGTAGAATAACATTGTTCTAACAGAGTTCCATATTTTGGGGACCTCGACAGCAGAATAA TGATGGCATAGGTCAAGGAAGATGATACCGCTCTGATACCATCTTGAAACTAGAAGAAATTCTGAACCAATAATTAATCA TGTCTCAATCAATTATTCAGATTTCTTCCAATTTCAGGAAGGGCGAAAAAACAGCAAAGTAGCAGAACCCTAAACAAAAC AACTGCCAAACTTAATGGTGGCGTGCAGCGGCGAGTGGAAGCTCTGATGGCCGTGAAAACTGGTCAATGCTCAACACCGG CTGGAACCCTAAACAAAACAGACTAAGAGACAACCCAACCCACAGGGAACAGATCAGAGCTGCAGCGAACAGACAGGACG GCAGCCTCTAGACTTTGCGGTGTTACTTTAGACACCGGGCACCACAACAAAAACGGATCAGCGTTCAATGGCCGCTCGAG CCCTAAACCCATGTGAGAAACTTAGAACAGTACTATGAAGCTGTGATGTACAGTGCCAGCGAACAAGATGCACAACGTAC AATGGCGGCAATGAATAGTACCTTAAAAGGGATGAACAATACGCTGCAGAACAATACCATGGTGAACAACCCCACAAACG CGGTACACAGTACTCACAAATCACAATGAACAGTGCAGTGATGTACAACACTGCTGATGAACAAACTACCATAGGTTCAA TGAATTGGATGTGGTTAAGATGCAGAAGTAGGGCCTCCTGAGACCGGGAGCTATTATAACAGAGTTCCAAATTTTGGGGA ACTCAACAGCGTGATAGTGATGACACATGTCACAGACGATGATACCGCTCTGATATCATCTTGAAGCTGGAAGAATTCCG AATTATTGATGAATACTTTATTAATTGTTGATTCAGAAGTACAATATTTATAGGCTACATTTCTAATCTGATGTAACATT TACTATGTTTATTTAACCAACATGTTAACCCCCCCTACCCCTTTTCTGTTTATAAAATATAAATAGCATTTTACACTTCT GTATAGGTGCTATTGTATGACGAACCGACTGCTGGACTTGATCCCATTGCATCTACTGTTGTTGAGGATTTGATTCGGTC TGTGCACAACAAAGGGCACGTTGATGATAAAAATTCTCAAAATATTGCATCTTATGTGGTCGTTACTCACCAACATAGTA CCATTAAAAGAGCCGTTGATAGGTAAAGGCATTTTCATAAAAGTTGCATTTCTACTGCCCTTGAAGTCTCTTAATTTACC TAGATTTTATGGTCCTTAGTCTGAGAAATTACTTCATAAATGCAGGTTATTGTTTCTGCACGAGGGAAAGCTTGTTTGGG AAGGAATGACTCATGAATTTACAACTTCAACAGAAAATAAAATTGTTCAGCAGGTAAGTTGTTTAGCTATATCTGGTATT AGCAACATATTTAGTTGACCTGAATTCTTTTATATGGAATCACAATTTCTTTATCTAGCAGCGATATCTAAATATATCAT TTAGAAAGACTAGTACAAAAGAAGACTACTTTTCTCCTCTTCAAACTACAAATTTTTTCCTAGTGAGGAATATGCACTGT AATTCACATTATGTTTTAAGATCATACACACACAAGTCTGCCTTGACCAAGCTTATTGTGGAGGGCAGTACTTTTGTCTT GAAAATTCTTTCTTTCCATGCTGTCCAAAGGTTTCAATCACTTCTCAAGAGCCTCCTTTCACAACATTATCTCCTGAAAC AGCTTTTCTGGCGAAGGAGCAGAGAAATGGAAAAGGCAACTTGTATTTCACAGGGAGGTTATATATAAATGACCTGTGTT TAACCCTCAAGCCAAACCATCCTCAGGTCAAAGAAAAATTCTTTTGGGGTGTTGTTATTTGGATATCTATTTGCAGAACA TGCAATAAGATGTTCAAACTTTGGTTTTTTCTGTATGTCTGATAAACCCCTGAGCTGCCTGATTATTGGACAACTGGGAT ACATTAAGGGCTCAATTGATTCCCCTGAAAGTTTTCTAAATTTAAAAACTGTTTTTAGAAACAATTTGTAAAACATGTTT TTAAAATCTGTTTGAACGAAATGTTTTACGAAGTTGAAAAGAAAAACTGTTTCAAAATTATATTGTTAATAACTGTTAGT ATTGTTTCTTCTTGTGTTTTGGCAGTTTGCATCTGGGAACCGGGTTGGTCCTATCAAATATTAGAACGGTACTGCAATTG TAGACTAGCTAAAATGTTATGGATGTGGCTTTCAACAAGCAACTTTTGGGATGAGCAATCAATTAGTTGAAGCAAGGATT GAAGGGCTTGTCATGGTTCTGGTGTTAACTTCCAATTTAACCACATTGAATTGGCCATCCGAGTGTTGCATTGGGAGATG GCATAGGTGTCGTGAGGAAGTAGGTAGAAGAGATTTGTAGAATACAAGTTATTAACATGAGTTCTATACAGAGTGCTTGA TGTGCTAAGATCATCTATTTTGTAAAACAATTCATTATAGTCAATTAATCTGCTTCATGATTCTTTTTTTTCTCATTGCA AACAACTGATTGAGAGAGTTTGTGTGATTTTATCTGTGATTTTATCTCTATTCATCCTTTCCGCATTTTTGTTCTTTCAG GC
CDS sequence (LotjaGi1g1v0483800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTTTCGCTTTCCACCAATCCCTTCTTACCCCTCACAGCAAAAAACGCTTTCTCTTCTCTTGCTTCCACTAGATTTCC ACCTGCAAACAGGGTGAACCCGCTCAAGCCCAGTAAGGATCACAAGAAGGTTGTCTGTGCCTGCATCGCCCCACCAAGAA ACTTCAACAGCCAAGACTCTTCCGCCATTGAATTCAATGGTTCATCGAAGTCAGAACAGCTAAGCACGTTGCGGGATCAT GAGGATGATTCTGATGTTCTTATTGAATGCAGAGATATCTACAAGTCTTTTGGGGAAAAGAAAATCTTAAATGGTGTTAG CTTCAAGATCAGACGTGGTGAAGCTGTTGGAATAATTGGTCCTTCTGGGACGGGGAAATCTACAGTGTTGAAGATTATTG CTGGACTTCTTGCTCCAGACAAAGGGGAAGTTTACATCTGTGGTAGAAAGAGAGTTGGTTTGGTAAGCGACGATGACATT TCTGGTCTTCGGATCGGATTGGTGTTCCAAAGTGCAGCACTTTTTGATTCTTTGACTGTTCGTGAAAATGTTGGTTTTCT CTTGTATGAGCACTCAAGCATGTCTGCGAAAGCGATATCAGACGAGGTCAAGAAAAGCTTGGCTGCAGTTGGATTGGAGG CGGGAGTTGAGGAGAGGTTGCCTTCAGAGCTATCAGGTGGGATGAAAAAGCGTGTTGCTTTAGCTCGATCTATTATTCAT GACCCCAAGAAGAGTTCAGAAGAGCCAGAGGTGCTATTGTATGACGAACCGACTGCTGGACTTGATCCCATTGCATCTAC TGTTGTTGAGGATTTGATTCGGTCTGTGCACAACAAAGGGCACGTTGATGATAAAAATTCTCAAAATATTGCATCTTATG TGGTCGTTACTCACCAACATAGTACCATTAAAAGAGCCGTTGATAGGTTATTGTTTCTGCACGAGGGAAAGCTTGTTTGG GAAGGAATGACTCATGAATTTACAACTTCAACAGAAAATAAAATTGTTCAGCAGTTTGCATCTGGGAACCGGGTTGGTCC TATCAAATATTAG
Protein sequence (LotjaGi1g1v0483800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVSLSTNPFLPLTAKNAFSSLASTRFPPANRVNPLKPSKDHKKVVCACIAPPRNFNSQDSSAIEFNGSSKSEQLSTLRDH EDDSDVLIECRDIYKSFGEKKILNGVSFKIRRGEAVGIIGPSGTGKSTVLKIIAGLLAPDKGEVYICGRKRVGLVSDDDI SGLRIGLVFQSAALFDSLTVRENVGFLLYEHSSMSAKAISDEVKKSLAAVGLEAGVEERLPSELSGGMKKRVALARSIIH DPKKSSEEPEVLLYDEPTAGLDPIASTVVEDLIRSVHNKGHVDDKNSQNIASYVVVTHQHSTIKRAVDRLLFLHEGKLVW EGMTHEFTTSTENKIVQQFASGNRVGPIKY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 19 | 19 | - | – | |
| PANTHER | 35 | 349 | 315 | 1.1E-137 | – | |
| PANTHER | 35 | 349 | 315 | 1.1E-137 | ||
| Gene3D | 83 | 345 | 263 | 2.6E-64 | – | |
| SUPERFAMILY | 86 | 329 | 244 | 3.44E-56 | ||
| ProSiteProfiles | 88 | 340 | 253 | 25.184 | ||
| Pfam | 103 | 259 | 157 | 1.9E-29 | ||
| SMART | 112 | 317 | 206 | 6.4E-14 | ||
| ProSitePatterns | 224 | 238 | 15 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Molecular function | ATPase activity | Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction. |
Expression pattern of LotjaGi1g1v0483800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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