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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0492400 |
| Transcript ID | LotjaGi1g1v0492400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Peptidyl-prolyl cis-trans isomerase; TAIR: AT4G17070.1 peptidyl-prolyl cis-trans isomerase; Swiss-Prot: sp|Q5ZLV2|PPIL3_CHICK Peptidyl-prolyl cis-trans isomerase-like 3; TrEMBL-Plants: tr|A0A1J7GE52|A0A1J7GE52_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0492400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:100590286..100596558) extracted from Lotus japonicus Gifu genome v1.2.
ATTAGTGTTAGTTATTTGTTTGATTTTATTTAGAAAAAATGAAAAAGAGAAAGAAAAAGAGGAAAGGTCGATATCATTCT ATTTTGCTGAGGAAGCATTGTCTTTTGTGTTCTTTGCATTACAAGTTTCACCATGAAAAGCTACGAAGGAAGGTGGTGGT TGTCGTTGTCGGATACCATAAACCTGTCACCGACATATGAAGTTGAAGAAGAAGAAGAAGAGGCCACCCCATTTCTCTGT TTGGCCTAATTCCTCTGTAATCTCAAATGGGTCGTCGCCAAAATGACTCAGATGTTGGTCGATTCACGCTTCTCATCCTC TTCTTGATGGGTGCAATTTCCTGTTCTACGGTGTATCTCTTCATCACCGTGATCTTCAGGCCGAGTAGCAGTGCATCTGT GTCTTCAATGCAGGGTTTGGATGAGAAGGGTGGTGGTGTTGATGATGATGTGGTGGGGAGGGGAGAAGAAGGGCAATGTT GTAGAGGGGTTGAGCATTTGGAGCTGTGGGGTGATGCTGTGAAATGGGGTGCTGAATTTAAGGTTAATTCTTCAGAGGAT TGTTGCATGGCTTGTAAGAAGATGTGTCAAGGTGATGGTGGACCTTGTGTGTGTAATTCATGGGTGTTTTGTGGAGATAG AGAGGCGTGTGGACCTAGATTTGGTGAGGTACTGTTGTAAATTCTGCCATCTCTCATTGTTTTATCACTATGCTTGATGG TATCTAAAATTTTATTTAGGGTCCAGGATTTTGTGTTTCTTATGAATCTTGTTTCCATAATTATGGCAGTAATATTATGT TTTCTGAGTCCTGCAACAGCATCATGATCGCAATTGTAACCGCATTTGTTTGTAATTACCTGCAATTTTAAGGATCACCG CGTTACCACTACTGCAACAACAATTTAAAATATGCTTGTTACTGCAGTGATGAGCTCATTAAGAACTCAAGTGTAAATGC TAAGAATGAATAGTGTGTTATGTAAATGAACGATATAGCATGTATTTGTAGGTCGGTGCTCGTGGTTGTCTGTGCGAGTG TGAGGTAACCCCTTTAAGCTGGACTTCTGAGCGGGCAGATGGCCATTTGGCTGTTCTGCCTCAGCTCGTTGTGTCTCGGT CTTCAGGTGACCGGGCAGGCGCTGGCCGGCCGGGCAGGACGCTTCTTCCTGAGTCATTCAGCCCGGCCTTATGGTGAATG CTTAAAACATGTCTTTTGGGCGGCTGAGAGGTTCTCAGGCTGGGTGGCTTAGAAATCGGCTGGAACAGTAGTGTTAGGGG TACAGGATGGAACATGAACGTGTGTTCACACTTCACACTGTTTCTTTCTGGTTCCCTCTTTATAGTAGAGCCAAGTAACC AACATGTACTATTTTCTTAATCTAGTTCTGTTTTATTTTTAAGATGCAACAAATATTGAGTAGAATTCATATGTTATGTT GCTTCCGGTTCTTAAGCACAAATATCAGAGTTTGCTTGGCAGGAATAAAATGGAATAATTAGGGGGAAGGTATAAGGATG TATTAAGTTATGTTTGTCTAAGCACACCTGAACCTGGTGATCTTTGATACCAACGATCTCTTGCTAACATATAACTACGT GTTTGAACACCAGAGCACCAGTTGAGTATAATGTAAATGGACTTTCATCCAAATCCTTAAGAAGAGTAAGTTCACTTTTG TCTCGAAGTGAGTGCTAATGCATGTTTGCATTGGTGCCACTGCAAACGGGTATCCAAACATAGCCTAAGTGGCTGACTTA CATTGCTTGTTTGCTTGATTAATTAACATTATCATAAATGAACACGAGGTTGTAGTTCCATTTTGTATAGATTCATTTAT TACCAAAAACGCGTAAAAGATTTAATTTACTGGAATATTTCTCCAAAGTATTTTCCCTCTGAAGATGCTTAAATTGGTCA GTATATGAGCCTAAAACCTACCTTTCTTATTAATATTAATGCCTTTAATTTTTTCCTACTTGCCAGTTGGTTCTTAGTCA ACCAGATGTACATTGTTCTGTTTTTTGGATACTTGACACATAGTGGACTTGCAGAGACCATCATTCAGATCTTTTTTGAT AGATATTAATCTAGGTGGCTTAATGCCTTTGTGCTTTAACTGAATTATACCCATGAATTGGTTATGATTATATCTTGATT TGGAATTTTGGTTTGGCATCATAGTACTGTCATTGTAAATACATGGTATTTTGGCTGGAGTAGTTTATTATTGCTTGAAA TGTACAATTGTTAAGGTACTCCTGTCCTTTAGGCATAAATCTTAGATGTACTTTATCCTAATCTTATATTATTACATGTT CTCATTTCAGTGTTGGTTAAAACGACAAAAAGATGCTTTAAACCCTGATCGACGAGACTCGGGAGATAAAGTTATGTGGA CTTCTGGGTTTGTCTTTGACAAGGGAGAGGTAGGAATAATATATTATCATAATTAGTTCTTGGAATTGCTTCATTTTAAG AACTGAATTCATAAAAATGAATTTTGTGTTTTCATGATCTTGAAGTCTTCATATTATAAGATTCATATCATCTTTCTCTC CATAAATGTATTTAATGTGTAAGACTAGCAATGCTTTATGTACACTGTAATGTGCTCAAAATATATTTGAAATATACTTG TATTCTGTGCTCATCTTTAAGCTACTATGATTGTTATATATGTCTTTTAGTTTTTCTAATTCTTTGTTTTGATTATACAT TTTTACTTTTAGGGAATTGTTGGTCTGGAAACTGACTATGGAATTCTTCGAATGAAAGTAAGCATTTCTATATTTATCTT CTCATTGCTTTCTTTTATCTTGGTTATTTTTATCCAATTTGCAGATCATGTCTTGCATTTTATCATCTTTCTATTGTCTA TTTCGTTAATGTTTAATCCAGCAAATGTGGAATGCCCAGTGTTTGTGGAACTCATACAACTATTAGTAGATTGGTTATTT GCTTCTCGATACATACGTGCAGTCGTGCATGTATGTGTTAGAAGGAGAGAGACAGATGCCTCACTTACATATAAAAAAAC TTTTCTGAGCTTTTAGCTCATGCTTTTGTTTGGTTGATTAGCTTTTTTTCTTTGTTTTCACCTATAGTCTGGCACAAGTT CAATATTGTATTAGAATGCAAGTTTCAATAGAGAAAGACAAGAGGTGACTCAAGGCTAGGTTGGTATAAATTTTACTAAG CCGTAGTTTTAGCTGAATATATTGAAAATATTAGCATCTTGTCCTCATACTTCCCTTTAGTGTTGGAGGGTGGTGTTTAG GTTTGAACTCTACTTCTGGCTCTACCCTTGTGTGTCTTCTCTAGGTATTAATCATGCTGCTTAATATGACTTGTAATGCT ATGTCATGACCAGCATCAGGATATAATGATTTGAATGCTTACTGGTTTATGATAATCTAAAGTTCATCTAGTTGCTAAGT AGATATATTGAAATGAGGAAATCGAAGGAATGTGTTCTCACCACCATATAGTGAGAGCTAATTTAATTTAACTTAATTTT TCATTCCCATCCAGTTCCCATCTACTTTTGAATGGAGCACGCTGAGTAGTGTTCCTCTATTTTACTAGAGTCAAAGATGA ATGTCATTTCCTAACAACCCTTTTATGAACATTCCTTCCTACAGCTTTTGCCTGAGTGTTCTCCAGAGTCTGTTGCCTAC ATTCTTGAGCTGTTGGCATTGCCTCATTGTGTTGGTTGCCAGATTTATCGTGCTGAAAGCCGGGGAAACTTTTGGGACTC AGAAGGAAACCATATAAAGAAGGTGAGGTTCATTATGTTAATTGTTATTCTTAATCGTGCATATCTATTATGTGGACATT GTAGAAGAAACCTGGTCTATCTTGAAAGAAAATGTCCAGAATCATATTTTTATCTTTGCTTCATTTCAGTTTTTTACTGT GAACTTGTTTTGAAGATTGCAGTTAAGCCAGTTTAAGTACTACTGTAGTTCTAGTTTAATATTTACCACTTGCCAAAGAA AAACACATCGAAGATTTTTAAACCGCAGGCTTAGTAATTATACTCCAAATGCTGAATTCTGGTTATCCTATTTTCAATTT AAATGATTTTAATTCTTTTTGTTTTTCCCCATTTCTCTACATCAATATTTGTTCGAATTATATATGTTTTGGTTTCTTTG TTTTACTGCTTTGCATATAATTTTTACTCTCAACACTTTGTGGCAATGTGGCCTTTGTTCTTCTTTACAAGCCCTAAAGA AGAAAATAAAAGGGGGACAAAGAAAATCTAGTGGCTCCACTATTGGAAAAAATCTGAAATATTCTTGTAGTATGTTGATA GCTACTCCAATCGTTTAGCCGGTTAATAGTTTAGTTTGTTAAAGTTTAGTTAGTTTTAGGGAGTTTCAGTAGTTGTGAAA TATAAATAATAGTTTAGTGAGAGTAGGGGTATCTGTTGGATCATTTGTAATTGGGAATAGGGAGAGTCCAGGTTCTGTCG AATAACTTGGGTGTTACATCAATGATATCAGTGTTTTCTTTCTTCTTCTTTGGCTGGTTCCTATCATATGTACCCCACTA TTGACACTTGTCCCATGAATGGGTTAGTTTTTCCTTTTTTTTTTGAAGTTTTTTAAATTTAAAATAGAATAAAACTGAAC GTTTGGGGGAGAATGAACAGTGCCGCCTTCGGTACTATAGGAGGACCAAAATATTGCTCTCACTTTTGAGGCTTCCTCAC ACGGTACTGGTCTCATCATGTGCCTGCGCCTGCTTCATTTACGTCTTATCTTTTTTCTTCTGAATTTTTTAAAGTCTGTC TCTGGACTGGGGAAACATATCCCGTGCTAGATGCCTTGTTCTTATGTTCAACTTTTGTATAACTTACCTTCTGGTTATTG ATTTATTGACCTCTATATGTGATATGTTTTTGAATATGAATGTTAATGCAGGCTCCATTTGGTCCTCCTTTTGCACTAAT TCAAGGAACACTTGAATCCCATGGCTCTATATTCAAGGATATTCCAAAAGAACACTGTCCTTCCATAAGGAGAGGGTCTG TTGCATGGGTTGGTTCTGGTCCAGAATTCTTCATAAGCCTCGCAAATCACAAGGAATGGAGAAATGCATATACTGTGTTT GGCTCTGTTCTATCTGAAGATATGGAAATTTTAGAGAAAATTGCTCAGCTTCCAACTAAATCAGAGGTTTTGAGTAATAT TGATGTCTCTATCTTGGAGAGCCCACTTTCATTACGGTTTCGGAGGATTTACACAGAGTCTTAAATCCTCAAATCTATAT GAAGCTCTAGATCAATTGAGGTGCAGAAACTGTTATATCTTGATTCCATTTGTTCATTGTAACAAAACTTTACCAGTTCC TTTATCAAATGATACTGGTTTCAATCTATCAAGGCATTACATAAATGGATCACGGTCTCAAGTTACTTCTCTACGTGCTT GAAGGGATTTGAATCATGCAGATATTCCGGCACCAAATTTGTAGCTGGTGTTATTTCAAAGAACACAAGTAGTTTGGTAG GTATATGACTTTGAGGATATTTCTGATTCTTTTGTTTTATATTTTTCTCCTTTTCCTGTATAGATGTACAAGAAAGGGTA AAAGAAAGGACATCCATTTACAAAGATACAAGCTTGAGGATACAAATTAGTGGATATTTCTTGATTTACTTATTAAGATG TGGGGATAAGATATAGAATATAATTGACTTGGTTGTATGCTCAATGCAGAAGTTGTGTGGTGTATTCTTTTAGTCTTAGT CTTCATATCCCTCTCATTCAAAAAAGGATTTTCATGGTGTATTTTGCAGTAGTTTCTAATTTATGTTTAAGAACTATTAG GTTTCTCATATTGCCCCATCATTATTAAATTAAAATTGAAAATACATACAAGGCAAGATGGAGAAATGTGTTTGAATTTC TGTGCATAACTGTTTATACTATTGATTAAATTTTTCTAGTTTTTTTTTTTTTTTTTTTGGTCAATAAATTTTTCTAGTTT TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGTCAATTAAATTTTTCTAGTTTTAGATACAGTTTTATTTGTTTCT TGGTGCACCTTCAATTTTTGTAAATGCATTTTAGAAAGTTCAGTGATAAAATTTGGGCTTAAATTTCAGAACTTTTTCTC TTACCTGGTAGCTTCTGATCCAGTTCGAAAACTTGCAATTATTAATTAGCTTGGAGGTGTTTGTAAACTTCTAAAATTGT GCATCTTAGTGTAATGACTAATGAGGTTAATTC
CDS sequence (LotjaGi1g1v0492400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTCGTCGCCAAAATGACTCAGATGTTGGTCGATTCACGCTTCTCATCCTCTTCTTGATGGGTGCAATTTCCTGTTC TACGGTGTATCTCTTCATCACCGTGATCTTCAGGCCGAGTAGCAGTGCATCTGTGTCTTCAATGCAGGGTTTGGATGAGA AGGGTGGTGGTGTTGATGATGATGTGGTGGGGAGGGGAGAAGAAGGGCAATGTTGTAGAGGGGTTGAGCATTTGGAGCTG TGGGGTGATGCTGTGAAATGGGGTGCTGAATTTAAGGTTAATTCTTCAGAGGATTGTTGCATGGCTTGTAAGAAGATGTG TCAAGGTGATGGTGGACCTTGTGTGTGTAATTCATGGGTGTTTTGTGGAGATAGAGAGGCGTGTGGACCTAGATTTGGTG AGTGTTGGTTAAAACGACAAAAAGATGCTTTAAACCCTGATCGACGAGACTCGGGAGATAAAGTTATGTGGACTTCTGGG TTTGTCTTTGACAAGGGAGAGGGAATTGTTGGTCTGGAAACTGACTATGGAATTCTTCGAATGAAACTTTTGCCTGAGTG TTCTCCAGAGTCTGTTGCCTACATTCTTGAGCTGTTGGCATTGCCTCATTGTGTTGGTTGCCAGATTTATCGTGCTGAAA GCCGGGGAAACTTTTGGGACTCAGAAGGAAACCATATAAAGAAGGCTCCATTTGGTCCTCCTTTTGCACTAATTCAAGGA ACACTTGAATCCCATGGCTCTATATTCAAGGATATTCCAAAAGAACACTGTCCTTCCATAAGGAGAGGGTCTGTTGCATG GGTTGGTTCTGGTCCAGAATTCTTCATAAGCCTCGCAAATCACAAGGAATGGAGAAATGCATATACTGTGTTTGGCTCTG TTCTATCTGAAGATATGGAAATTTTAGAGAAAATTGCTCAGCTTCCAACTAAATCAGAGGTTTTGAGTAATATTGATGTC TCTATCTTGGAGAGCCCACTTTCATTACGGTTTCGGAGGATTTACACAGAGTCTTAA
Protein sequence (LotjaGi1g1v0492400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGRRQNDSDVGRFTLLILFLMGAISCSTVYLFITVIFRPSSSASVSSMQGLDEKGGGVDDDVVGRGEEGQCCRGVEHLEL WGDAVKWGAEFKVNSSEDCCMACKKMCQGDGGPCVCNSWVFCGDREACGPRFGECWLKRQKDALNPDRRDSGDKVMWTSG FVFDKGEGIVGLETDYGILRMKLLPECSPESVAYILELLALPHCVGCQIYRAESRGNFWDSEGNHIKKAPFGPPFALIQG TLESHGSIFKDIPKEHCPSIRRGSVAWVGSGPEFFISLANHKEWRNAYTVFGSVLSEDMEILEKIAQLPTKSEVLSNIDV SILESPLSLRFRRIYTES
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 26 | 26 | 6.0 | – | |
| PANTHER | 1 | 337 | 337 | 1.6E-185 | – | |
| Phobius | 1 | 11 | 11 | - | – | |
| PANTHER | 1 | 337 | 337 | 1.6E-185 | – | |
| Phobius | 12 | 37 | 26 | - | – | |
| TMHMM | 13 | 35 | 23 | - | – | |
| Phobius | 38 | 338 | 301 | - | – | |
| Gene3D | 77 | 162 | 86 | 3.7E-7 | – | |
| Gene3D | 163 | 328 | 166 | 8.0E-11 | ||
| SUPERFAMILY | 164 | 323 | 160 | 9.64E-19 | ||
| Pfam | 170 | 318 | 149 | 8.5E-10 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Protein peptidyl-prolyl isomerization | The modification of a protein by cis-trans isomerization of a proline residue. | ||
| Molecular function | Peptidyl-prolyl cis-trans isomerase activity | Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0). |
Expression pattern of LotjaGi1g1v0492400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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