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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0492700 |
| Transcript ID | LotjaGi1g1v0492700.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cysteine protease; TAIR: AT2G44140.1 Peptidase family C54 protein; Swiss-Prot: sp|A2Q1V6|ATG4_MEDTR Cysteine protease ATG4; TrEMBL-Plants: tr|I3SYJ4|I3SYJ4_LOTJA Cysteine protease; Found in the gene: LotjaGi1g1v0492700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:100614215..100621728) extracted from Lotus japonicus Gifu genome v1.2.
AATTTACTCATCAAAAGAAAAAGATAAAAAAAAATTCACCATCCCTGATAAAAACAACCTTTGATCTTTAACGTTCTTTG TTTTAGGAGTTGCACACACATACACATTACCTAGAAGAAGGTTGAGAAAGAAACAAAGAAAGAGAGAAGAACAACTAGAG TCCGAACCAAGTCTCATAGCTGAGTTCAGGATCGGAATTCTCCCACCCTTCATCATCATCATCATCTCTCGATCCTCGTT CAGCTACGAAACATTATCCTCGTACGCTTCGATTCTCCGCTGTTTAATTTTCCTTATTCTCTTCGAAACCCCTCTTTTTT AAAATTAAATAAAATTCTATTTATTTTCAACGGAGATTCGTCGTTTTCTTCCCCGTAAACGATGTTTCCTATGCGTTGAC AATTACTCAATCTGGGTCTCTCTCTGCGACTTCCCTTTTTGGATTTCGTTATCTTTCACTTTCTGCTTTCAAATTTGACA GTTCGTTCTGTTTGTTCATAGTCTTTCATGCTCTTGATGATGTAATTGATTTGGGGTTTCGATTTCATGTCTGCGTGATG CGTTTCTGTTATATTTAAGATGGGTTTGTAGTAGATTTGGGGTGCTTGAATTTGCTTATATATTAAGAAAAAAAAAATTG ATTTGGGGATTAAAGAAGCCTTGGCTATATGGGGTGCTTGGTGGAGGATACTTAAGGTTAATGTTCAATTATTAATTGAT AGGAATACTAGTTGTTTTCTTGATGGGGAAAATGTTTTGAACTTCTACAGATACCCCATGTTTTTTTCACAAAAAATAAT GGTATGAAGGATTTCTTTGTTCCAGTGGAATTAGGATTCTCTTATATCACTTGACAATGTCAAGTGAAACATTGTGTCTC TCTTTCTCTTCATATATATTCAAGGGTCCTGTCTATTTAATACATATGAAGAGAGAGATAGACGCAATTCCAACATGAGG AGGTTTCCACTTGAGAGGATCCTGATCCACTACTAGTGAGGGCGCTATAAAATTGTCTTCTAGGTGATTGCGTCATACAG TGTTATCGAATAGCGGCGTACCGGATTTTAGGCTAATCGCGATGCCGCTATTGCCATTATAGCGCACTATTCGTCGCTAA ATAGCGGATTTTTGGCTCACCCCGATGGTCCGCGATCAAGATTTGACAACACTGGCATCATAGGATATTTTTATCCTATT TGGGCTTAGGGCAAGGTGGATTACTACCTGAAGAGTTGGGGGGGGGGGGGTTGAATCTGTGCACTTGCAGAGAATATGTT TGCTTATGGAAAACTACTTGTTTTCTGTTCTCAGATGATTAATGAGAAATAATGAACTTGTATATTTTGGAGGTTTTTTA TGTCGTTGTTTCATTATTCACCTCTTTACTTGCAGATATTGGCACAATCTTGGTCTGCTTCTATGAGACAGATCTTGTGT TTTCTGCGGCTGCATAATGGTATTGAAGGCTTTCTGTGATAGGATTGTTGCTGCAAAATGTTCTTCTAAAAGCTCAACTG AAACTGTAGATAACTCTCAGGTGCCTGCTTGTTCGAAAGCAGGGTCTAGTGATAGTAAGTTTCCCAAGGCTTCCTTATGG TCAAGCTTCTTTACATCTGGTTTTTCAGTCATTGAAACATATAGTAAATCACCAGCTTCTGAAAAGAAAGCAGTTCATTC TCAAAATAGTGGTTGGGCTGCTGCTGTGAGGAAAGTTGTTACTGCTGGCTCAATGAGGAGATTCCAAGAGCGTGTACTTG GGTCAAGCAGAACTGACGTTTCAAGCTCTGATGGTGATATATGGCTTTTAGGTGTCTGCCATAAATTTTCGCAGCAGGAA TCAACTGGAGATGTAGATAATAGTATTGTATTTGCAGCATTTGAGCAAGATTTTTCCTCAAAAATCCTATTAACGTATCG GAAAGGTCTGTTGTGTGTATCCTACCTTTTTTGGGATGCATTCAAATGATAGATTTTAGAATAACAAATTTTAGTATGCA TACTCTATAGGTTTTGATGCTATTGGAGATTCAAAGTATACTAGCGATGTCAATTGGGGTTGTATGCTTCGAAGCAGTCA GATGCTTGTTGCTCAGGTAATATGCCTTTTCTGTAATGATTGCTTTTGACGTAGGTATTGTCATGCGGTTCCTTCTAATA ACATGTGTTATTTTTTGCCTTTCTCTTTTGTGTTTATTTCAAAATAAATCTACTAAAATGGCTTCCTCGTTTCACTGTTC AGGCATTACTTTTTCATAAATTAGGTAGAATGTGGAGGAAAACTACTGACAAGGTCAGGTGATTGATATGCAATGCGGGT TATTTGCTGTTGCCCTTTTTCTCTACCTTTGTTCCTTATATGTTGACATCTATATGTTTTTCTGTCTTAAGATATAAGGC CGTTAGGTTGACTCACTATTGTGCTTTCATGATACAGCCACTTGACAAAGAATATCTTGACATCTTGCAACATTTTGGTG ATTCGGAGGCTTCGTCTTTTTCTATCCACAATCTTCTTCAAGCTGGGAAAGGTTATGGCCTTGCTGTTGGGTCATGGGTG GGACCATATGCCATGTGTCGCTCATGGGAAGTTCTAGCTCGTAACCAGAGGGAGACAAATGACCATGGAGAACAGCCACT TCCAATGGCTCTTTATGTTGTTTCTGGAGATGAAGATGGGGAGCGTGGTGGAGCACCAGTTGTCTGCATTGAAGATGCCT CCAGACGGTGTTCCGAGTTTTCAAGGGGTCTAGCTGCTTGGACACCTCTACTTTTACTGGTACCTTTGGTTCTTGGACTT GATAAAGTCAATCTAAGGTGTGTAACATTTTCAAGGTTCTATGGTATTATATAATTTATTCACGTTTCAACTTTCAACCT ATTAGTATTTTAGGTTTATTTAAATAGAGAAGTTCCCTGCTATTTGGATTCTTTTATGAATAATACTAGTAACAATCCAT TTTAAAGTGTCCATTATATTAATTTCTAAATAAAAAAAGCCAATATAAAACAGAGTCAGGTTTAGTGTATGTTGAAATTT TAAAGTTTTTTTTTTACAGCCGTTTTGTTATACTTTCAGTTGCACCTGTTATGAATGTTGAATCACAGTGATAGAGACTC CGCAGTGGATAAAAACTGTATGTTGTAATTATCCATCCAAGGTATACAGAAGTGCGCTTCGAAGCGCTAAAGCGCGCTTG AGGTGGCGCTGTGCTTTGAAGCGGCACTAAGGCGAAAATCAGCGGAAGCGTTGAGAAAGCGCAGAAGCGTGATTTTGAAG CTTCTGCCGCTTCAGCCAGATTCGCTTGTTTCCGGATTTTTTGGACCCGTTTTGCTAAAATTAGGGGTTTTAAACCTAAT TTTCAATTGTTCCTCTTCTATCTTGAGGCTCTCTCTCTCACCCGTTGAAACTGCTGCATCTCTCTCGCGATTCTGTGTTA CTCTTCGCCGTCTCTCTCGCCGTCTGCACAGCCGCCGCCGCCGGCTACTTGCAATTTGCAAGTTTGTTCCTCTTCGACCC TGTCTCTCTCTCTCTCTGTTATTCCAAACTTCTGTTGTTCATCAAATCTTCTTCTATTTCTTCCTTCGACTTTGTCTCTC TGTTCTGTTGTTCGAAAATTTAAGAGCACCTCTCTGTTCTCTCACTTGTTCGAATGGGTTATAATGTTACTCTGTTCTCT CAGTTAAGAGCAATAGTTTCGTCACATTGTAAAATAGCTATAATATTACTCTGTTCTCTCACTGTTCGAATGGGTTATAT AGTGTCTTATAGCTTATTTATGACTTATGTATGAATGATCAATTATGAGTTATGGTGTTTTGTGTTTTATGTATGATATT CTTAAGACATATGCATATAAATATTTGTAAGTATAAATATATATATAACTGGCAAAAGCGGCTAAAGCCTACGCTTTAGC TAGCGCTTTACGCTTTTGGACCCTCCACGCTTTATTGCTAAATCCCGCTTCTGACTACCTTGTATCCATCATATACTTGT AAAATACCATCTCTTTGGTTCAAATTTGAAGCGTACCTGTATAGTAGCGTAACATCACAATTGGTTTGAAAATATTTGTC TAATGAGTTAGTACGCGGTAGAGGTGATAATTAGGTGTAATAGGTCATGTTATCCATATTCATAGGTGATTGGTACATCA AGTTTTTTTAAAAATAATTTAAATTTGTTGGTCATTTCCACAGTAATGCAACCACTGATTAGTTGTATCTGTAAACTATT ATCAGGTATATTCCTTTATTGCAGTCAACTTTTAAATTTCCCCAGAGCCTTGGCATCTTGGGTGGCAAACCAGGTGCTTC AACATACATAATTGGTGTTCAGAATGAAAAGGCATTCTACCTTGATCCACATGATGTTCAGCCGGTATGTCAGTATTGAC AAAGTTATTGCTTCTTACTTCCCTTATTATATATAATTGAAATTGCAAAACTTGTAGTCATGCGTTATATATTAATTACC ATATTGAATGAAAAATTTATAGGCACGCTATACCCCATCTTGATTTAATGGTGTTTTTACAATTTTACTTGACAAGTCAT CAACTAGTCTATGAAGTTTTGCTTTCAGAGGAAACAAAAAAGTTAAAATAGAAAAACCAAGAAACTGGTCTTGTTCTGTT TTCAAAAAGTGCATGTCATTGAAACATGGTTTGGTAAATATTTAATAGATTTTATTGATGAAATCAGGACAAGTTTTTAT TCAGAATCATTCAGGATTGTTTGCTGAGATAGCAGTTATGTGGTATTAATTCTCTGAATCTTTATATATACGACCAACCA GCTATGCTAAATCGAAAATAATCAACAACTTGCTAAGTATTTCTCCTAACAAGTGAAACTGGATTACAAAAATCTTACAT TCTGGCTTTGTTGTGGCAAAGCACAATGATTCAGGAATGGAATGATTTCCACTGATCTCTTGTACTTGTTATGTACTCAA GGTAGCAAGAGTTCACATTATTTAGGCATGAAACATTGTGAATCTTCTTACATTTTAGCTGAATAACATGTTTCTGGGAA CCTATGTCACTTGGGTTTGATTTTGAAAAGATGTATGTCTGGAGGAATAAGAGGTGTGATGCACCTGAACATACCCCTGA GTGATTGTAACTACCAGCTGAGGTGGCAGGGGCGTAGAACCATTTGGGTAGAGCTGAAGAGAGAAATAAGGCTGTTATAT TCCTTGGGCTTAGGCTGGGAGTGATAGAGGCACTCTCTAATTGCCTCCATTGTTGCTTCTGTTCATTTCTTACTACTGTA TACACTCCATTCGAGACTCCTTTTCATTTGGTGTTGCTCTTACTTGGACACAGTTTTTTCTTCCAAGTACTAGTGTAATT TTTCTGGTACAACATTTGGTATCAGAGCCTTCCACTATGTCTCTCGGCTGCAAATGAGTGGCGCAGGTGGTGACGCCCAG CATTGTAGTGTTTGCTAGGACTCGTCAAAGGGCTAGTTCACAGCCAGCCCATCTGGGCGCCGGGGCTGCGGAGCGTGGTG GAATGTTAGGACCCAATTGCAAGGTATGGGACTTGAGTCCCACATTGGCAGTATGAGATTCTAATGTCGGGTTTATAAGA CCTTAGGCTCTCAACTACAACAGTTATCTTAAGTTCTTATTAAACATATTCAAATTGCTATATTTCTTCAAAACTCCGGG TACATATGCATTTGGGGATCCACAGAGCTTGTGATGATTTCTGCTATATAGATGAAAAAACTAAAATATAAGGCTAGGTG CATTTGGGTAAACAACTTAATTAAGTGTTTATGGAAATGAGCGTTTATTCAAAAACTAATTTGAGAAACTTATTGAAATA ACCTCAAAAAGGTTCTAGGTATAAGAACTTATTCATAAGATAATCTGTGCAACTTATAAAATAAGCTCAAAATAATAGAT CGGATATAAGCTATTTACGTAAGCTCTCCCGAACAATTGCACAAATGCCTATGTTATAAGATAAGCTTAAATAAGCTCTT CCAAACAGGATCATATATATTTTAAAAAGAACTGCCCATAGTAAAGGGAAAAGGCAAAGAGAAGGAAAAAAAAAGGAACA ACTGGAAAAATGAAGAACAAAAAGGAAATCTCAATGATGAACTAGGTTTCCTTGCTGTTTATGCATAATTTCAATCATAG TGTTTAGGTTGCTGTTGGTTGGTGAAGCATTCATACTTAGAACGTCTTAAATGGGTTTCAGGTTGTTCATATCAATGGGG ACGCCCAAGATCCTAATACTTCATCATACCATTGCAAGTAGGTTTTCCTATTGGCTTTCTTTTATATATTTGTTGTTAAC CATAATTTGTTTATCTAACATTTAAAATTCTAACAGCATTGTCAGGCAAATGCCCCTAGATTCAATTGACCCGTCCTTGG CCATTGGATTTTACTGCCGAGACAAAGGTTTGCTGGTTTACTTTGGTTTAATGTGTTCAATAATTGTAGCTGATATCTAA GCTTTGTCTTGACCATCATCACCTTGTCTATGGTGGCTGCCAGATGATTTTGACGATTTCTGTTCGCGTGCTTCCAAGCT TGCGGAAGAATCAAACGGTGCACCATTATTCACTGTAGCACAGTCTAGGAGTTTCCCATTTCAAGACGCTGGTTACGATG TGTCAGGTGACAACACTGGATTTCAAGAGGATGATTCCCATGGAGTGGATCTACTCAATGATGCAGGAACCAATGAGGAT GATTGGCAACTACTATAATTTCCAAGCTATAGACATGGATTTGAAGTACTTGGTTCTAATGAGCCTAATTGCTATTTGAT GCTTGACTTGGGTCTTCCATTCTTCCAACATTGTTAAATAGGGCTTGTAGAAAGTAATTTGAACACTCATCATGATTCTT TGGCTTAAATCATTTGCTCATTTGTTCATATATATAGCTAACCAGTTATTTGTTGTACATTCATACTAGTTGGTTCATAT TTGTTGCCTGTACCCTTTTGTTGGCTACAGACTTGTAGTTGATAATACTTTCGAAGTGTCAAATAAGTGGTGGAAAATAA TTCATATTGAGATGGAATGTTTCCTTTAAGATAAAAGGATAGCACAAACGAAACACTTGACTCATTTAAGATTAAATAAA AAGTCTGATATGTTGAACATTGCGATGCTGATATATTGGCGAGGTCATGTGGATGGCATGTCAATACTGCTATTATTTTC ATGTGTTCTTCTTTGGATATTAATAACTAGGGCAAGATGGTGGGTTAAAGACCACTTTCATGAGTGATTATTCAGTGTAT GAACCTTGATAAATGGGGTTGAAATTAGAAAAGGCTAGAACACTTTTAATACATTAACATTTGAAATGAACTTAAGTATA TATAGGTTGAAGAAAGCACTTTGTGAACTAATATAAGTTCCAATAGCTTGGTAGAGAGAGCTGCATAGGGACATGATTTT TTTTAAATGAAGGCTTTAAAAAATGACCACTTGGCCATAACTTTCATTAAAGATTAAAGTGGAGCAAGAGAGGA
CDS sequence (LotjaGi1g1v0492700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTATTGAAGGCTTTCTGTGATAGGATTGTTGCTGCAAAATGTTCTTCTAAAAGCTCAACTGAAACTGTAGATAACTC TCAGGTGCCTGCTTGTTCGAAAGCAGGGTCTAGTGATAGTAAGTTTCCCAAGGCTTCCTTATGGTCAAGCTTCTTTACAT CTGGTTTTTCAGTCATTGAAACATATAGTAAATCACCAGCTTCTGAAAAGAAAGCAGTTCATTCTCAAAATAGTGGTTGG GCTGCTGCTGTGAGGAAAGTTGTTACTGCTGGCTCAATGAGGAGATTCCAAGAGCGTGTACTTGGGTCAAGCAGAACTGA CGTTTCAAGCTCTGATGGTGATATATGGCTTTTAGGTGTCTGCCATAAATTTTCGCAGCAGGAATCAACTGGAGATGTAG ATAATAGTATTGTATTTGCAGCATTTGAGCAAGATTTTTCCTCAAAAATCCTATTAACGTATCGGAAAGGTTTTGATGCT ATTGGAGATTCAAAGTATACTAGCGATGTCAATTGGGGTTGTATGCTTCGAAGCAGTCAGATGCTTGTTGCTCAGGCATT ACTTTTTCATAAATTAGGTAGAATGTGGAGGAAAACTACTGACAAGCCACTTGACAAAGAATATCTTGACATCTTGCAAC ATTTTGGTGATTCGGAGGCTTCGTCTTTTTCTATCCACAATCTTCTTCAAGCTGGGAAAGGTTATGGCCTTGCTGTTGGG TCATGGGTGGGACCATATGCCATGTGTCGCTCATGGGAAGTTCTAGCTCGTAACCAGAGGGAGACAAATGACCATGGAGA ACAGCCACTTCCAATGGCTCTTTATGTTGTTTCTGGAGATGAAGATGGGGAGCGTGGTGGAGCACCAGTTGTCTGCATTG AAGATGCCTCCAGACGGTGTTCCGAGTTTTCAAGGGGTCTAGCTGCTTGGACACCTCTACTTTTACTGGTACCTTTGGTT CTTGGACTTGATAAAGTCAATCTAAGGTATATTCCTTTATTGCAGTCAACTTTTAAATTTCCCCAGAGCCTTGGCATCTT GGGTGGCAAACCAGGTGCTTCAACATACATAATTGGTGTTCAGAATGAAAAGGCATTCTACCTTGATCCACATGATGTTC AGCCGGTTGTTCATATCAATGGGGACGCCCAAGATCCTAATACTTCATCATACCATTGCAACATTGTCAGGCAAATGCCC CTAGATTCAATTGACCCGTCCTTGGCCATTGGATTTTACTGCCGAGACAAAGATGATTTTGACGATTTCTGTTCGCGTGC TTCCAAGCTTGCGGAAGAATCAAACGGTGCACCATTATTCACTGTAGCACAGTCTAGGAGTTTCCCATTTCAAGACGCTG GTTACGATGTGTCAGGTGACAACACTGGATTTCAAGAGGATGATTCCCATGGAGTGGATCTACTCAATGATGCAGGAACC AATGAGGATGATTGGCAACTACTATAA
Protein sequence (LotjaGi1g1v0492700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVLKAFCDRIVAAKCSSKSSTETVDNSQVPACSKAGSSDSKFPKASLWSSFFTSGFSVIETYSKSPASEKKAVHSQNSGW AAAVRKVVTAGSMRRFQERVLGSSRTDVSSSDGDIWLLGVCHKFSQQESTGDVDNSIVFAAFEQDFSSKILLTYRKGFDA IGDSKYTSDVNWGCMLRSSQMLVAQALLFHKLGRMWRKTTDKPLDKEYLDILQHFGDSEASSFSIHNLLQAGKGYGLAVG SWVGPYAMCRSWEVLARNQRETNDHGEQPLPMALYVVSGDEDGERGGAPVVCIEDASRRCSEFSRGLAAWTPLLLLVPLV LGLDKVNLRYIPLLQSTFKFPQSLGILGGKPGASTYIIGVQNEKAFYLDPHDVQPVVHINGDAQDPNTSSYHCNIVRQMP LDSIDPSLAIGFYCRDKDDFDDFCSRASKLAEESNGAPLFTVAQSRSFPFQDAGYDVSGDNTGFQEDDSHGVDLLNDAGT NEDDWQLL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 306 | 306 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 18 | 18 | - | – | |
| PANTHER | 4 | 488 | 485 | 2.8E-178 | – | |
| PANTHER | 4 | 488 | 485 | 2.8E-178 | ||
| SUPERFAMILY | 100 | 444 | 345 | 2.16E-97 | ||
| Pfam | 141 | 426 | 286 | 6.9E-88 | ||
| Phobius | 307 | 323 | 17 | - | – | |
| Phobius | 324 | 488 | 165 | - | – | |
| MobiDBLite | 457 | 476 | 20 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0492700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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