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LotjaGi1g1v0495000.1

Overview

Field Value
Gene ID LotjaGi1g1v0495000
Transcript ID LotjaGi1g1v0495000.1
Lotus japonicus genome version Gifu v1.2
Description Ras family protein; TAIR: AT1G02130.1 RAS 5; Swiss-Prot: sp|P28188|RAD2A_ARATH Ras-related protein RABD2a; TrEMBL-Plants: tr|I3SUV4|I3SUV4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0495000
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:100926385..100932564) extracted from Lotus japonicus Gifu genome v1.2.

GTTAAATTCTTGTCGGTCAAATTAATTGGATCCACCAAGCAAACTCAAATACGGCACCGTATTGCAACCTTTCCACGCGT TTCCTTTTCATTCAAAACAAGCAACAAACCAACCAAACGTGGTTGTCATTCCATTCCTTCTGATATTGTTCCGCCACCGA GCCAATCTCCGACGACCCCTCCGGCGACACCGCACCGATCTCCGGCCAATTCACAATCCCCTTTCGCTTTACCGAGAATG AATCCCGAGTAGTAGGTTCCTTTATACATTTAACCCTCACTCTCTCTTCGTTCCCCCCTTTACCTTGATTCGTGTTTGAT CTTCGGGAAGTTCGTTCCTTTTTCGGATTTTTTATCTTCACTATCAAAAGGGTGTGTGGGGTTGTAGGTCAATTGATGGT TTGTGGTGTGTTCTGTTAGAATCAAGTTTTGGTGATGTGTAACCCTAGATTGATTGGTTTTCTGAAATTTTGACCCGGTT TAATTTTCTTTAATGTTATGGGATTGAAATCTGATATGTTTCAATCTCGTACTCTACATCGATTGCTGTATTTTTTTATT TTTTGTGATAGATTTTGAAGCTGCATAGTTACCATGATCTTATCCCTTATTGATCTCAAAGTGTTACATGAGTTTGTATG CCCTATGTTTATTGACATGAAGACTAATACCCCTGATCATGATGTCTGACTGGATTATAAAATTAATTGCATGAATATTC TGATTCGTGATTTTGAACTATTTGTATGGAAGATCACTAGGAGAACCATCAAAGTATGCTAAACCTGGGGAGTTAGGTGA AACTTGGGAGAGTGTCTGCTTGGTTGTTACGGTACTCTGGGAGTTGTCTGCCATATAGGAAGCATGGGATTTGGATTGGG GCTTATGTGGCATAGGGTTCTTTCATTTGGGTTAATCAATAGGGATAAAGATATTGATGGCTTGGGTGAAGTTCGTTTAT GGAGCTTAAAGAATCAGACTTTATTATTGGATTTCAATTTTATTGTCATCTTAATGTGTTTTTGTGTGAGAAAAAGGTTA CTTCAGAAGCTGATTCCAATCTATTTTACGGGATAGAATTAACATGTTATGGTTATCCTTTGCAGTGATTACCTGTTCAA GCTCCTTCTTATTGGTGACTCTGGTGTTGGCAAATCATGCCTTCTTCTGAGATTTGCTGTAAGCTTTCTGCTGCTTTTCA TGCTAGTTATTAACTAGTTATTAATGTGACTACTACTGGGGTTTGCCTCTTTTAGTATAAGTATATGTAACATATTTTTC ACTTTATCATGTTTTTCCACTCTTCTGTGAGCTACTTGTTTTAACCAATGGGACTCCGAGTGTGCTGCACTTGTTAAAAG TAATTTAACTACTACTTGTTTTATTTTGTTCTTGGTTTGAGGTTTTAATTGTGTATGTTTATTGTTATAAATATGGAAGG GAAGTCGGGCTGTGTGCCTGGTGGGAACGGGCTTCTGAAAAGCCAGCCCCGGAGATAATAAAATAATGAATTGTTGGACT AGCCTTTTTTCTTTTAGATCACATTCCCCCCCCCCCCCCCCCCAAGTAGTAATGTATGCTTTCCCTACAGATAGAATGGT TGTAGTTTTGCATGTTGATAATTTAAGCGTCTAATATGCACTATCTCTAATACATTTTTGCTAAATATTTTAAAAATCAG AATTAAATTACAAAATAGGGAGATTAAACTCCTTAGCTAGCCCTATGTTAAGACTAACAGTGCAGAAAAAAGAAAGAAGA TGACAAGAGATTTCTTCTGATGGACTGACTCACCTTTTATCCTGATGCCTAACCGATTCCCTCCTATACCCACACTATTT GCCATGTAGACAAGGTCATTACAACCCTATAAGCTCCAAATTCCTCTTCTTCTCTTGCATTGTCCTCAAAGCAGTAGTCA TATGAGGCCTAGCATTTTACCTCGAGTTTAGGTTAACCTAACTCTTATAGTTGTATGGAAATTAAAATGCTTTTTTTATC TGATTTTTCCCTTTCGTCTGAGTTCCATTTAGTTTGAAACAACATTTAAAGATTTATATACCTTGGAACCTCAACTTGTC CTCCATATAATTATTGTGTTTATCAACAAGGGTACATAACGTCCCATTTAGTCATATTTTGACAAATATTTCATAGAAGT GTAATATTGAAGACCCTTTTTCTTTCCTTTTCCCGGTTGTGAATATATTGCCAAAAATCATATTAGACACATTTGAAATT ATGCATGCCCAACTTACCTCTCTTGCAACATTTCTCCTTAACCAATTTTTTTGCTACATTGCTCAATTCACACTCCTGTC TAAACTTTTATCAATACCATCCTATTCACATTTCCAAATTGTCATTATCTCTTTGTAAGATGACACCTGCTCAAAAAGCA AACAATTTGAGCCAACGAAAATAAAATCTTACCAGTTAAGAGCTTAGCTAATGGTTTGTTTTTATGGTAATTGTTAACCA GTTATGGTTTTGAATCTCTCTGGATTTTCTCTTGTTAACCAGACCTAATTTACGAGCCACTTCACACCCATTAATTTTCT CATTCAACTAGCAAGGCCAATACGAAACGATCGGTGTCGTTGAAACATTATAAAGTTAGTGGGAAAATTAGACCCTATGG TTAATGCTGAAAGTGATGAGGTTGTGTCTCCTGTTGTGAGCTTTTAGTGTTGATTTGAATCAATGAATGCACTTTCCAAC AATATTTAAGTAAAAATGAGGGTCGCAAAATGGAGTTATTAACCTTTGTTAGTTTATTAAAAGATTATACTATGTAAACT TATTAATTGATTGAAAAGAGGCTCATGGCTTGGCTGGTATCTCACTAAATCTGTGTAATGTACTTTACTTTTAGAGCTTA TGATAGTTATGCTAGCTCACTATGGAAGGTTCTAACCGAACTAGGATTTACTTTGCATGTTTTGTTGATCTTGGTTCTTA GAGATGGCATGATGTGGCTTAATGCAGTTATTTGGATCAATTTTATGATATTTCTCTGTTTTATGCTTCAGGATGATTCA TACATTGAGAGCTACATAAGCACAATTGGAGTTGATTTTGTGAGTACAACTTTGCTAAGTTTTATCTTGAATTGATTAAA GAAATTTCTGAACTCATCAGTTCTCTCTTTTTTTTTTGTAGAAAATACGCACCGTTGAGCAGGATGCAAAAACCATTAAA CTCCAGATCGTATGTGTTTAGTTGATATTGTTGTAGTTCCTTTATCCATTGATATTATGTCTTCAGCGAGATTGACCTAT GTTTTCTATCTTTTTGTTGGACAGATAGTTTCCTATAAAATGTTTTGTTGATCGTTTCTACCTTTGTTTTTATGCACCTC CTACTTGAAGTTATTTATTGACTATGTGGGTCACCAAAAATTCGTGGTTATATTGACAGATGTTTCTTACCTTGTTTTGT GATCTGATTTCATGTGTAGTGGGATACAGCTGGGCAAGAAAGATTTAGGACAATCACCAGTAGCTACTACCGTGGGGCAC ACGGGATCATTGTGAGTGATGACTGTCTTGACATAAGCTTTTAAAATTAGATTTTGTAACTTTGTGATGTTTTCCTGCAT GCTTGACTGACGGATTCCTCTGGCAGATTGTTTATGATGTAACAGATGAAGAGAGCTTTAACAATGTGAAGCAGTGGCTC AGCGAAATTGACCGATATGCCAGTGATAACGTCAACAAGCTTTTGGTTGGCAACAAGTCCGATCTGACTGCAAATAGAGC TGTCTCATATGAAACCGCTAAAGTATGGCTTTGTGATACGTCCCTTGAATTTTGGTTTTTTGTTTTTCCATATTAAGGAA ACCTATTCAAGCTTGTCTCCATGCATAGCACTTTTAAGGGGTTATTGCTCTTCACTTCCACCTTCAGACCCTTACCCTAT TTTTATGTTGTTTTTCTTTAACAGGCATTTGCTGATGAAATAGGCATTCCTTTTATGGAAACAAGTGCAAAAGATGCTAC AAATGTCGAACAGGCATTTATGGCTATGGCTGCTTCCATTAAGAATAGGTATTCATTTTTTATTATAATTTAAAGTAGAT ATTCAAGCTAAGTGTAAGATTTTAATGCTGCTTCACTCTAGAAGCAAGTCCGGGAAAAAATTAGTTAATAGTTACGAACT TGTAGAAAGAATAATTGTACTGTAGTGCATGCCAATATTCGTTAGCTCGAGTCTATTGATATTATTTGTGTACTTGGCTT GGAAAAACGAGATCTGTTTTCTTCTTGTGCTTCTTCATTAGAGTTAAGAATAGAGGCAAAGATATAGGCTTTTAGACTGA TTTTATACCTATTGATTTGTGAAATTGGATCGATCAAACATGTGCTCTATTTTTTTTATTAAATATACTAGATTGATGCA ACTCGTGTCTGAATATGCTGAGAATTGAGAAATGAGTTTTTGGTTCTCTGTTTTCATAAGTTTTTGACAAGCTGAAAATC ACAGTTTAGATGTGTACAAAATAGAATAAACATTTGAATGGTGAAGTTATTCAGTCACATGGTGAATTATGCAACTCGTG TCTGAATATGCTGAGAAATGAGTATTTGGTTCTCTGTTTTCATAAGTTTTTTACAAGCTGAAAATCACAGTTTAGATGTG TACAAAATAGAATAAACATTTGAATGGTGAAGCTATTCAGTCACATGGAAATTTGGTTTTCTCTTTTTCTGTTTTCCTTT AAATAGCTTGTCATAAAGTAGATTCAACCATTCGAGTAGATGAATAGAACATAATTCATGAATTATGATATACTGTGTGT TCAGATTCTAGTTGGGGGCATCGTGAATAGACTTTCATCCCAATCCATAAATAATAGTTTAGTTTATTTTTTATCTTGAA GTGAATGCTAACATTCGTTTGCGTTGGTGCCAACTGGTATCCAAACATACCCCATAGTTTTTCTGCTTTATCCTCCCTCT AGTTCCCTAAGGAATAAGGATGGTTTTAATTTTCTCTAGTTATGTTTAGATAATTTTTTAATGGCATATCCTCCTAAGCT AAGTTATCTGATGGTAACATTCTCTTGAATGCAGAATGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCAACAGTGAAT ATCAGTGGAAAGCCAGTTGGGCAGAGTAGTGGTTGCTGCTCTTCCTAACCACAAGTTCTTTAGATCCATTTCACTTTATC TGCTGCTCACCTATTGCTTGTAAGATATTTTTTTTTCAATTTCACTGAATAGTGGACCAATGTCAGAATGTATTGGTTGG TATGAAACTGACCTAGATAATTCCATTCTTTGGATATACTTAATGATATGGCTTGTGCAAAGTATCATACTCATAAGTGC TAAATCTATGTTCCTGGTGATACCTGTTTTGGTTTATGTTGAAACTAGTATTTCTACTTTTTTATGGTTGATAATAATGG GGTTTGAACTTTATGATATCGAGCAAACTACCAGTCACTCACACCACTCCAGTGGCTTGAGGAGATCAGTGCTTTTTTCT TTCTTTTGTTTGATTGCTACGAATATGTGCTGTTATGGAACTGCTATTCAAGCACATGGTCTATATTCACTCTTTGCTCT GCCCCTTTATCAAATGTTGATCAAGTCTCCCACCAAGCGCGTAAATTAACTGGCGGAGATTGTGCGGGCAACAGGATCCA TATTCAAGCAATTATATAGCAGCTTCGAACATTGGTCTACAGAATGTACCATATATACAGAATATTATGTTTATGACAAA CTTCATTAAGGACTTATTGTCCATTTGGAATTGGGTTTTCTCATATTTTTCATGAGAGTAAAGAGGCTAATTTTGATTTT ATCATGATATGATAGGCTCGCGAATGGTTTCTTAGAAAGGTAAACTTATAAATATAGTTGATCACACAACTCTTGCTCAA TTTGTCTTGTCTTCTATGTCCACTATTGCATGCAGCAGTTGTGGATCCCCCAAGGTGTTCGTAACAAGGCTTAATCCAGT TTTTGGTCCCCAACCTTTGTTATAAATATGACTTTAGTCCCTCGCCGGAGTAAAGGTGGGGGTTGGTCCCCCGTTTTTTG TAAAATGATTGGTTTTGGTCCTTCCGACTGGTTGGTCAACGCCGGAGCTCTGCCAGCTGATGTGGCACTTGCCACGTCAA TTAATGACGTCCTAAGTGGC
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0495000.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGAATCCCGAGTATGATTACCTGTTCAAGCTCCTTCTTATTGGTGACTCTGGTGTTGGCAAATCATGCCTTCTTCTGAG ATTTGCTGATGATTCATACATTGAGAGCTACATAAGCACAATTGGAGTTGATTTTAAAATACGCACCGTTGAGCAGGATG CAAAAACCATTAAACTCCAGATCTGGGATACAGCTGGGCAAGAAAGATTTAGGACAATCACCAGTAGCTACTACCGTGGG GCACACGGGATCATTATTGTTTATGATGTAACAGATGAAGAGAGCTTTAACAATGTGAAGCAGTGGCTCAGCGAAATTGA CCGATATGCCAGTGATAACGTCAACAAGCTTTTGGTTGGCAACAAGTCCGATCTGACTGCAAATAGAGCTGTCTCATATG AAACCGCTAAAGCATTTGCTGATGAAATAGGCATTCCTTTTATGGAAACAAGTGCAAAAGATGCTACAAATGTCGAACAG GCATTTATGGCTATGGCTGCTTCCATTAAGAATAGAATGGCAAGCCAACCTGCAAACAATGCAAGGCCTCCAACAGTGAA TATCAGTGGAAAGCCAGTTGGGCAGAGTAGTGGTTGCTGCTCTTCCTAA
Download CDS Sequence

Protein sequence (LotjaGi1g1v0495000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDAKTIKLQIWDTAGQERFRTITSSYYRG AHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKSDLTANRAVSYETAKAFADEIGIPFMETSAKDATNVEQ AFMAMAASIKNRMASQPANNARPPTVNISGKPVGQSSGCCSS
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
SMART
SM00177
1 177 177 0.0031 –
Gene3D
G3DSA:3.40.50.300
2 200 199 6.1E-74 –
PANTHER
PTHR24073
3 201 199 2.8E-117 –
PANTHER
PTHR24073:SF1109
3 201 199 2.8E-117 –
SUPERFAMILY
SSF52540
4 178 175 6.23E-67
IPR027417
ProSiteProfiles
PS51419
4 202 199 38.986 –
SMART
SM00173
6 172 167 6.1E-34 –
TIGRFAM
TIGR00231
7 163 157 2.7E-34
IPR005225
CDD
cd01869
7 172 166 6.79977E-126 –
SMART
SM00175
9 172 164 1.5E-109 –
PRINTS
PR00449
9 30 22 8.2E-46 –
Pfam
PF00071
10 170 161 1.4E-66
IPR001806
SMART
SM00174
11 171 161 4.0E-16 –
SMART
SM00176
14 199 186 3.2E-5 –
PRINTS
PR00449
32 48 17 8.2E-46 –
PRINTS
PR00449
50 72 23 8.2E-46 –
PRINTS
PR00449
112 125 14 8.2E-46 –
PRINTS
PR00449
147 169 23 8.2E-46 –
MobiDBLite
mobidb-lite
174 202 29 - –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003924
Molecular function GTPase activity Catalysis of the reaction: GTP + H2O = GDP + phosphate.
Subterm of
GO:0005525
Molecular function GTP binding Interacting selectively and non-covalently with GTP, guanosine triphosphate.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0495000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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