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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0524300 |
| Transcript ID | LotjaGi1g1v0524300.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Zinc-finger domain of monoamine-oxidase A repressor R1; TAIR: AT5G38690.1 Zinc-finger domain of monoamine-oxidase A repressor R1 protein; Swiss-Prot: sp|Q922M5|CDA7L_MOUSE Cell division cycle-associated 7-like protein; TrEMBL-Plants: tr|A0A072U7K4|A0A072U7K4_MEDTR Zinc-finger of monoamine-oxidase A repressor R1; Found in the gene: LotjaGi1g1v0524300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:104935645..104942108) extracted from Lotus japonicus Gifu genome v1.2.
ATCACGTCTTAAATAGGAAACAGAAAAAAAACTCCCAACACCAAAAATGTTCTTCCCCCTTTTCATCTTCGCCGCGCCGG AAAGCGCTTCCTCCGCTCTCTTCCCCCGCACGATGGCACCGCCTCAGCCTCCCCTATCCGCAACAGGCTCGTGCCGTCGA CCTCCGACGAGGTTCGTACACTCTGGATCGGTGATTTGCAGTGCTCGATGGACCAGAACTGTCTCTACCAATGTTTTGTT CTTACCGGCGAGGTATCACTCTGCTAACTTCTTCTTCTTCTTCTTCTTCTGCTTCCTATGATTTCAATTACCTTCAATAT TGATGCATTATTGATTTCATAAGTTAGATTTGAACTTGACATTATATGGTATGGTTTGATTAAAGAAATTTGTGTGATTG AAACCCTAAACAAACATATAACAGACGCAATTTTTCATTTCATTCAAAATATTTCCTTCTATTCCAATAGACACGATTTT TCACTCTGAAATCACATATAGGTCCTCCTAAGATTGCAATGTTATAATTGTGCCCACAAATTTTCAACACTCGTTCCCAG TTCCCGCTCCACTGCATCCGGATAAGGACAAAATTCTCCACTTTCTCACTCACCCTGTGACTGTGCTGTTGCTGCTATAA AGCCACCACCAGCATTCATTTCTTCAAACCAAGCCATTCGTTTCACCATTCTTCTCTTGCTTTTGCCCTTGCTCTTCTCT TGTTCTCTCATTAACCATGTCTGCTCTTCCGCCTGTCAACTCCGCCGCCAACAACTCTGCTGGGGGGATTCCAGTTGTGG TCGATCATCAGGAAAAGGGAAAAACATGCCACCAAGTAATGAATTTTTTAAACTTCTTCAGTGAATTGACCCCCCTTTTT GTTAGGTTTTTCACATTTGTTGTTATGATTGAATGCTGTTGATAAAAATGAAAGCTTTCTTCTATTTACTCGATCTTGTA GAGTTTTATGAATGGCTTATTTTTCATATCTGGATTGTGGCTAATGCTGTTAAAAACCAAAATCCTGAAGTGGGTATCTA AAGGGAAGGTCGGAATTCTGTGAAAAATTAAAACTTTTGCAGATAGATGAACCAATTGTATTAAATTCAGGTCTGTGACG GCGATTGTGGTTGTTACATACAGATCTGAAAGTCTCAGATTGCGATCGCAACTGTAGTTGTGATCTTTTGCAATATTAAT ATCACGACCGCAACTGCAATTTAAAACCTTGGATGGAGTTTTAGGGTTATGGTGTTTGTGGATGGATCTCTGAATTAGAT TGTTTTGTATAGTTTGTGTGTTTCTTTGCTCTTAATTTTCAAGTTCATTTTGATGATACTGTTTTGTTGTTTTTTTTCTA GTGCCGGCAAAAAATCAAGGGTGTCGCTGCTTTGTGCAAGAATCTGAAGAAGGGCAAGCCTTGTAAAATCGGATTGTGCC ATTCATGCCTTTTAAACAGGTTAGACTCATGGATGTGATCATGTGAACAAGAAATAATAGATGTGTCGTGTTGTAATGAT CTTAACCATGTGCGTGTGTCTTCTAATTGTATATCATTTCTTACTTGTGATTTGAAAGTTGTGTTTTATGTATTCTATTA CAGTTGTGTTAAGTTTTATAATTTTCAAAATAAGTTGTTTGCCGTGTTTCACATTCGTGGTTTTCTTTCCAATATCATAT TAATTTTCAGAATTATTCTATTTTGTTGAGGGTACAAAAGTAGAGAGATGCATATTTGGATGTGCTGAGGATTTTATTTT GTTGAATTAGATATGGGGAGGATGCACAACAGGTCAATAGGTTGGATGGGTGGAGTTGCCCAAAGTGCCGGGGCAAATGC AACTGTAGCCTTTGCATGTAAGTTGTGCCTGAGTTTTCAGTTTAGCATAGAGGCTTTTATTTTGCTCCATTTGTGTGTTT ATTTTGAAAGGAGAGTTATTTTGTAGGCAAAATAAAGGTAAGGAGCCTACCGGTAGATTAACGAGGGAAGCCAGGACTGC TGGATTTAGGTCAGTGATGGAATATCTGGATGCTAAGGAAGCAGCGGAGTTGAACACGAACGCAAATGATGTTGCTGCTG TTTTGCCTCCAGAGGAGGTGTGTTAATTTTCTCTCCATTTAACTTCTTATCTATCAAATGGTTGTCAGAAGTTTACCTTC ATGCGCTAGCTAATTAAGCTTCTCTTCATGTGTGCAATCTGAATAGATCATAACAAGAGAAAAAATGTTTTGATAACTTG AATTAACTAATCGATGATTGTTTTATGTTTTTATTTATTCTCAGATCGTGATGGAATTGCTGGAAGCTAGGGAAGCAGCG GAGTTGAACACGAATGCAAATGATGTTGCTGCTGTTTTGCCTCCAGAGAAGGTGTGTTAATTTTCTCTCCATTTAACTTC TTATCTATCGAGTGGTTATCGGAAGTTTACCTTCATGTGCTGGCTAATTAAGCTTCTCTTTATGTGTGCAATCTAAATCA ATGATAACTAGAGAAAAATGTTTTGTTAACTTGAATCAAGTAATCGATGATTGTTTTATGTTTTATATTTATTCACAGAT TGATGGTCTTGAGGCGGCCTTGGGTGCAAATGATTTCCCCCCCATTCCTCATCAAAATGAGGAAACAAAATGCGAAAGAG ATGATAAGAATGTGTGGGATGATTTTGATTTTTCTGAAGCCGTGTCTCAAGATGAGATTTTCGCAGATTTAGAAAGGAAC CAGGACACTGATTATCATATGAAAGGTGGTCCTGAGGTTTGGGGTTTAAATGATTATGTGAATCCTTCAATTCTTATTTC CGATAATTGTCATGGTACAGATGTTAAGGATGAAATATCTGAAGAAGTTCTCCTTCCGCCGGGCACTGAGTTAACGGAGG TATTGGGCATTGAGTTCCCACATGAGGATGTTGGGAATGTTGTGCAGTTCTTGGACTTCTGCAGGGTTTTTGGGAAGGTA TGCATTCATGTTGATCTTCTATTAAATCCTTGCTTGATTAATTGCAATTTACTGCTACATGCAGTGGTTGGCCCATTGAA TATTCACAATTGTCAAATTCATTTAGTGCAATAGGAAGTCAGACTACAAAACTGGGATAACTTGTTGCTTTTATTGATGT CATGTAACTTAAAAAGTCAATTTATCTTGTACTTGATCATTTTATTGAATGTTTGATTGTTGGGTGGATATGAATTATGA TTTAGTTCTATCCAGGACAACTAAATTCTATAGTTATGATGGTGGTATTGTTGCATAAATAATCCTCGTTTTATACTTAG TGGGGCTGCATCCATTCTTTTTTGTTATATCAAGTGTTCCGACTTTTCTTCCCTGTGAAATCAGGGTCTTAACATGAAGG AAGGGGAAGCAAAGACTATTTTGCGAGAACTAGTTCGCAAACAAAACTTGCGCAGTGGAGAGAACACCCTAGCTGTTGAG TTCCAAACTAGACTTTTGACCCTGCTCCGCACCGCTGCAGGACATAAGTGAGATTATCCAATTTGCCTTTTTTATTCTTT TTTCATTTTTTTGGTGTGTTTTTTTCTTTGATTAAAGCTTGTTATCTGCATCACTTTGGTGTAGGTCTCCATCCTTAGCT ACAGCAGATGGGAACTTTTCATGGTTGAAAGCTCTAGGGGATTTAGCTTTACAATCTCCTCTTCTGCTCAAGGATTTCCC CGTAGAAATGCTCAATAAAGGTCTCTCTGGGTATTGTAACTTGAGTTTGTCTGACAAGCTTAGACTCCTGACTTTCATCT GTGATGAAGTTCTTAACTCAGAGTAAGTATTTCAAACTCAGATAGAAAATGCTTTTTCTGTTTTTTTCTTCTTCTTATCT CTATTCAGCTTTTTCTTTTTTATTTCCTGCTGCTAGTTTTCATCTTGTTTAAAGTGGTTGAAACTTGCTTAATATGTTCA GGAAAGTGAGGAGTTACATTGAAAAGGAAAATTCAAAAATTGAGAAGCAGAGGAAAGAAGCCAAAGCTGAATTTGCGGCT GCGAAGGAAAAGGTAATTACAAGAAACAAGGTGGTCTGTTCTTTGCATCTGGGTTCGTTTGACTGTCATATTGTGTTCAT AAAAGTGTTTTTATGTGTCACTTACAGGTGAAAAGCTTGAAACAGAAGCTGCAGGAAGAGACAGCAAAAAGAATTCATTC CAGTGGGGATCCTGGGTCATCGACAGAGCAAGATGCTGCTGTCCTGAAGTTGTTAACAACTGAAGTTGCTCAAGCTCACA GTGAAATGCTTGAGGCTAAGGAAAATATTCCTAAAAGTATGTTTTTGATGTTTATGGGTTGTTTATATGCTCCAACTTTT ATTCAGTTTCATTCCTGATGTTAATATCTGCTGCACATGGCACAAACATGAGCTGGTATCTCATAATCTTCCTCGTAGAC TCCAGTAATTATTTGCATGACATACTATTAATCTTCAATGCTATTAATACTTCAGATCTTTTCTCACATGATAGCATGCA TTCTCTTGCTCAAAATGTTGTTAGTAAGTTGTTCAATTTCTGTTGATTTAAATTTCCTATTTTTCAAAAAAGAAAAGTGA GATTTAATTTGGTAAATTGACACACACTTAATTGGGGTAAAATAGAAAATGTGTGTATTTATGATTACTTTATGTCGTGT AAGAGTTTAATATTTCTTCTAATGTAACGGTTTGCACTTAACATTGTTCTCTTTTATAATATTGTAGGGAAAATTTCTAA TGCTACGAGGATTGAGCCTCACTTTGTGGATGGTAGAAAGGTCTTTTGGAAATTGAAATGTTTTGAAGGTGAAGATACTC TTTTGCTACAAGGTAATTCTCAAAACGAATTAGACTGATTTTTTAAAATGATGCTACTATGGCTCTAGCAAGTTTTCTAA ATCATGGCACAACATGCAGACATCAAAGTACAAGAAGGGGATGGTACTGCAACTGATGAAAGGTGGTTTTTTTACGGTCC TGAGAAGAAGAATGACATTGATAAGTACATTGCTTCAAGGTGAGCTTTTCTCTTTGGTTCTTGATATTGGAGTTTGAATT CTGTATAATTTGTGGAGGAACATGACATGATGATAAGTAGTTACCAAAGCGTGTTTGAAGTCTTAGTATCTGTTATTGAG AGAATGATCTCATCAGTTATATACTAAACATATCTAAAACTTTTGTTAATATTCAAGTGGAATGAAATATAAATTTTACG ATAATTGAAGAGCTTTAATAGCTATTTATTAGAAAATTCGTGAAGGAAACTGCTTAGTTTCCCTTTTAGATGCGCAACCC AATTGCATATATTGCTATATATACTTTAAAACATAATCCAACAGCAATAAGTTTAAAGAGGGCCATTTAATTCAGCCATG CACATGTATGTGAGTGCAACATTTTTTTTGGGTTAAATTGGTGGTACAAGCACTTTGGTTGGGGAGGAAGGGAATAATAG GTTGCTTTGTGGAACAGGGAGTGTTTTTCAATATTACAATATTACACATACTATCAAACTTTAAATTAAAGACTCCAGGG ATGTTTAATTTTCTTAAAAAAATATAAAGGTACATAACTTTAAACTCTTGAGTTCTTGACTGGCGTAGTACTTGAATTTT TTTTCATTAAACTTCTTATCTGCGAATACAGTAGTTTTGTTAGTGACATTGTAATGATATATCCTTTATGTCTGTTTATG CTCATCAAGCGCAACTGATTTAATGGATTTCTTTCTTACCTTGGTTGCAGGATAAAGAGAAATAAAGGTCGCTAGGCTCC TTACAAACTTTCGAATGGAAGCAGTGAAGCTGATATGGAGAATGATTATTAGGGAATAAAGCTGAGCTGGTTTGTAATAA GGAGTTGTAACTGAAAGTTAGCTAGCCCAGTTAGTTTCTTACTTGTCATCAGTGACATATGCTGTACCAGCTCAATTGTA TATAAACTCCTCTTAGACATGCCAATTGAAAAGAATCACATTGATTTCTTGCAACCTCATTGCTTCATGTTTTTTCTTTT CTGATTTCAATTTCTTAAATGGTATCAAAGCCCCAACCAGGGTTGTGCCATCTTGTTTCCAAATTAGATCATGGGAACGG TAAATGCAAATCAATGGTTTAAGATCCAATCATTCTTTTGCACGGTAGGTGGTCTGGAATGCAAATCTGTCTTGAAACCC TTACTGCGTTCATACAAGTGAAAATCCTTCCAATGAATAGGTTAGTCCAGGTTTGTCCAGCGGAAACTGTCACCCTATGT TGGGTTCGTTGATGGTAGCTTGCCACAACCCATGGACAACTACAACCCAACCTTTGAGGTGTTGGAACAATATAATAACT TGGTCCATTCTGGATTTTTTAATTCTGCATATCCTACGGTTGCCCAAAGCATTGTGTATGGTGAGAATGCTCTCAAGTTA AAAGTTAAATTTGAAGAGGTGTGTTGTGTTGTCTCTACTAAACTCTACTTAGGCAAAGTTCATT
CDS sequence (LotjaGi1g1v0524300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACCAGAACTGTCTCTACCAATGTTTTGTTCTTACCGGCGAGTGCCGGCAAAAAATCAAGGGTGTCGCTGCTTTGTG CAAGAATCTGAAGAAGGGCAAGCCTTGTAAAATCGGATTGTGCCATTCATGCCTTTTAAACAGATATGGGGAGGATGCAC AACAGGTCAATAGGTTGGATGGGTGGAGTTGCCCAAAGTGCCGGGGCAAATGCAACTGTAGCCTTTGCATGCAAAATAAA GGTAAGGAGCCTACCGGTAGATTAACGAGGGAAGCCAGGACTGCTGGATTTAGGTCAGTGATGGAATATCTGGATGCTAA GGAAGCAGCGGAGTTGAACACGAACGCAAATGATGTTGCTGCTGTTTTGCCTCCAGAGGAGATCGTGATGGAATTGCTGG AAGCTAGGGAAGCAGCGGAGTTGAACACGAATGCAAATGATGTTGCTGCTGTTTTGCCTCCAGAGAAGATTGATGGTCTT GAGGCGGCCTTGGGTGCAAATGATTTCCCCCCCATTCCTCATCAAAATGAGGAAACAAAATGCGAAAGAGATGATAAGAA TGTGTGGGATGATTTTGATTTTTCTGAAGCCGTGTCTCAAGATGAGATTTTCGCAGATTTAGAAAGGAACCAGGACACTG ATTATCATATGAAAGGTGGTCCTGAGGTTTGGGGTTTAAATGATTATGTGAATCCTTCAATTCTTATTTCCGATAATTGT CATGGTACAGATGTTAAGGATGAAATATCTGAAGAAGTTCTCCTTCCGCCGGGCACTGAGTTAACGGAGGTATTGGGCAT TGAGTTCCCACATGAGGATGTTGGGAATGTTGTGCAGTTCTTGGACTTCTGCAGGGTTTTTGGGAAGGGTCTTAACATGA AGGAAGGGGAAGCAAAGACTATTTTGCGAGAACTAGTTCGCAAACAAAACTTGCGCAGTGGAGAGAACACCCTAGCTGTT GAGTTCCAAACTAGACTTTTGACCCTGCTCCGCACCGCTGCAGGACATAAGTCTCCATCCTTAGCTACAGCAGATGGGAA CTTTTCATGGTTGAAAGCTCTAGGGGATTTAGCTTTACAATCTCCTCTTCTGCTCAAGGATTTCCCCGTAGAAATGCTCA ATAAAGGTCTCTCTGGGTATTGTAACTTGAGTTTGTCTGACAAGCTTAGACTCCTGACTTTCATCTGTGATGAAGTTCTT AACTCAGAGAAAGTGAGGAGTTACATTGAAAAGGAAAATTCAAAAATTGAGAAGCAGAGGAAAGAAGCCAAAGCTGAATT TGCGGCTGCGAAGGAAAAGGTGAAAAGCTTGAAACAGAAGCTGCAGGAAGAGACAGCAAAAAGAATTCATTCCAGTGGGG ATCCTGGGTCATCGACAGAGCAAGATGCTGCTGTCCTGAAGTTGTTAACAACTGAAGTTGCTCAAGCTCACAGTGAAATG CTTGAGGCTAAGGAAAATATTCCTAAAAGGAAAATTTCTAATGCTACGAGGATTGAGCCTCACTTTGTGGATGGTAGAAA GGTCTTTTGGAAATTGAAATGTTTTGAAGGTGAAGATACTCTTTTGCTACAAGACATCAAAGTACAAGAAGGGGATGGTA CTGCAACTGATGAAAGGTGGTTTTTTTACGGTCCTGAGAAGAAGAATGACATTGATAAGTACATTGCTTCAAGGATAAAG AGAAATAAAGGTCGCTAG
Protein sequence (LotjaGi1g1v0524300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDQNCLYQCFVLTGECRQKIKGVAALCKNLKKGKPCKIGLCHSCLLNRYGEDAQQVNRLDGWSCPKCRGKCNCSLCMQNK GKEPTGRLTREARTAGFRSVMEYLDAKEAAELNTNANDVAAVLPPEEIVMELLEAREAAELNTNANDVAAVLPPEKIDGL EAALGANDFPPIPHQNEETKCERDDKNVWDDFDFSEAVSQDEIFADLERNQDTDYHMKGGPEVWGLNDYVNPSILISDNC HGTDVKDEISEEVLLPPGTELTEVLGIEFPHEDVGNVVQFLDFCRVFGKGLNMKEGEAKTILRELVRKQNLRSGENTLAV EFQTRLLTLLRTAAGHKSPSLATADGNFSWLKALGDLALQSPLLLKDFPVEMLNKGLSGYCNLSLSDKLRLLTFICDEVL NSEKVRSYIEKENSKIEKQRKEAKAEFAAAKEKVKSLKQKLQEETAKRIHSSGDPGSSTEQDAAVLKLLTTEVAQAHSEM LEAKENIPKRKISNATRIEPHFVDGRKVFWKLKCFEGEDTLLLQDIKVQEGDGTATDERWFFYGPEKKNDIDKYIASRIK RNKGR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 15 | 557 | 543 | 4.8E-124 | – | |
| Pfam | 15 | 104 | 90 | 8.7E-25 | ||
| PANTHER | 15 | 557 | 543 | 4.8E-124 | ||
| ProSiteProfiles | 271 | 336 | 66 | 8.691 | ||
| Pfam | 375 | 410 | 36 | 8.3E-8 | ||
| Coils | 406 | 447 | 42 | - | – | |
| Coils | 466 | 486 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. |
Expression pattern of LotjaGi1g1v0524300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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