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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0528700 |
| Transcript ID | LotjaGi1g1v0528700.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor-like kinase; TAIR: AT5G13290.2 Protein kinase superfamily protein; Swiss-Prot: sp|Q9LYU7|CRN_ARATH Inactive leucine-rich repeat receptor-like protein kinase CORYNE; TrEMBL-Plants: tr|A0A0S3RR85|A0A0S3RR85_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0528700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:105545371..105547944) extracted from Lotus japonicus Gifu genome v1.2.
ATGTTTAGGAAAAGACACAACCCTTTTTCTCTTGCAAGGGAGTTCTTGGTATTTCAACCTCTTCTTCTTGTTCTGGTATT GTTCACCTTGCAACATAACACTGTGCATTGCCATGGAAGATTTAGCAAACACATCTCTTCAGAACCATCGCCACCACCAT CAGAATACAAGGATAACTCTAGGAAGATCATTTTCAGCATAGTTTTAGGAGCAGTCACTGGACTAGTTTGTTCTGTTCTC TTTGCATTTGTGGTTCGTTATGTGGTTCAGTATCTGAACAGAACACCAATCCTCAAAGGCCCTGTCATATTCTCCCCAAA AATTGCCCCCAAAACACTCCAATCAGCTTTGGCAAAAGAAAACCACTTGCTAGGTTCAAGTCCAAATGGGAAATACTACA AAACTGTGCTTGACAATGGGCTGACAATTGCAGTCAAAAAGCTAACACAGGAACAAAATTCTCCAGAGGCAAAGAAAAAA TCAGTGAAGAGGCAGATACAAGCAGAGCTAGAGATTCTTGCAAGGTTAAGACATAGGAACTTGATGAGTCTGAGGGCTTA TGTTCGTGAACCTGATGGATTTTCATTGATGTATGATTATGTGTCCACTGGGAGTCTTTGTGATGTGATGAGTAGAGTGA GGGAGAATGAGTTGGTGCTTGGTTGGGAAGTTAGGCTGAGGGTTGCTGTTGGTGTGGTGAAGGGTCTTCAGTATCTTCAC TTCACTTGTGTGCCTCAGATTCTGCACTACAACTTGAAGCCAACTAATGTGATGTTGGATGCAGAGTTTGAACCCAGATT GGGAGATTATGGATTGGCTAAGCTTCTACCAAACTTGGATAGAGGGACATCTGTCTACAGCCCTCCTGAATGTTTCCATA ATTGCAGGTAAGACAAAATGGATTTGATGAATCAAACTCGTTTATACTTTTATAGTATGTTAGGATCAACTTCTTTTTCC TCCGAATCAATTTTGTTAGTCAGAAGCTACTCAGATAAGTTTCTTTCTAGAATCGATTATGCCTTTAGAATTGATTTTGG AATGATTGCCAAACTTGCACTCATTGGTGCTATGAATTTGCTCTCTTTCTTTTTCTTACACCAAAAGTGTAAATCAGTGG TTGATAATGGGCATTTGTTCGGTTTGTTACCTCATTCAAAAGTTCAATACTTCATTGGAGGGCTTTTCTCTTTGGAATAC CTAATCAAAGATTGTTGTTGTGAAATGTAATCAGTATTTTGAATTTTCATGGTGCCATTTACAATTTACAATTGGTATAT TATTTAATGAGAGCTTTGCAAAACCAACAATTTTTTATTTGGAAATATCACTTCATGTAGTCAAGGTTTTTAACTTTAGG CTCTTGGTAGGTCCTCACATGCTGTAAAGTGTAAACTACTAATAGCCTGTTTAGATCAGCTTCTATTTCCTCATAATCAA TTATGGCATCAGTAATTACTCATAGAAGCTTCTCCACAAAATTGATTGTCTTAAATTATAGTGCTTGTTTGGAAATCATT CTACAATTGATTCTAGAGTCTGAATCAATTCTAAGGATAAACTTTTGTGTGTTCTACTATTCGAGAAGCTAAGGGAAGTA GCTTCTCTCCTTCATGAATTTGGCTTCAGCTTGGTTTCTTAATGAATTTCCAAATGTACTGTTTGTGAGTAACTTTTGGA TTTCAAAATTCAAAATTGATTTTGAGGAAAAAATAATCCTAACATGCAAATAGGAAGGATTTCCAAACATGCACTAAGAT TGGTAAGTCAGAACATAACATAAAAAATAGCACTCATTGTTTATTCTCTCACAAACGATGAGTGCTATTAGGAATGCCAT TAATTTTGTTAATTTTCAAAAAAATAAAATATGTTTTTCTTATTTTACTCTTTTGAACTTTATTCATTACTATCTCTCAT CGTTTATTCTCTCACATCATTTATGTTTTCCTTTATCTCATCATTTATTGCAAGAGGGTATTATTGGGAAAAATTGTTTA ATGTTATCTTGAAATTGTAAGTGGACAGTTAAATAGGAACAATTTTTTCTCAAAGTGGACAATTAAATAGGAACGGAAGG AGTAATTAAGTAATTAACAAAGGTTTGTTCATAATTTAAGTTGTTGTATCTCTTGTTGTTTCATTGGTGGATGTCCATTT AAGCATGAATACAAAGGTTGCAATAAGATGTTTGTTCATTCCATTCTTTCATGTTAACTTCTTGTTATTCTGATTGAATT GTGTATTTTTGCAAATTTCAGCAGGTACACGGACAAGAGTGACATATTCAGTTTTGGCATGATCCTTGGTGTTTTGTTAA CTGGCAAGGACCCTACAGATCCATTCTTTGGAGAAGCAGCAAGTGGGGGGAGCTTGGGGTGTTGGCTGAGGCACTTGCAA CAAGCAGGTGAAGCAAAAGAAGCTTTAGATAAGAGCATTTTGGGGGAAGAAGGGGAAGAAGATGAGATGCTCATGGCTTT CAGGATTGCTGCTGCATGCCTCTCTGATGTGCCTGCAGATAGGCCTTGTAGTGATGAGCTTGTTCACATGCTAACACAAC TGCACAGTTTTTGA
CDS sequence (LotjaGi1g1v0528700.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTTAGGAAAAGACACAACCCTTTTTCTCTTGCAAGGGAGTTCTTGGTATTTCAACCTCTTCTTCTTGTTCTGGTATT GTTCACCTTGCAACATAACACTGTGCATTGCCATGGAAGATTTAGCAAACACATCTCTTCAGAACCATCGCCACCACCAT CAGAATACAAGGATAACTCTAGGAAGATCATTTTCAGCATAGTTTTAGGAGCAGTCACTGGACTAGTTTGTTCTGTTCTC TTTGCATTTGTGGTTCGTTATGTGGTTCAGTATCTGAACAGAACACCAATCCTCAAAGGCCCTGTCATATTCTCCCCAAA AATTGCCCCCAAAACACTCCAATCAGCTTTGGCAAAAGAAAACCACTTGCTAGGTTCAAGTCCAAATGGGAAATACTACA AAACTGTGCTTGACAATGGGCTGACAATTGCAGTCAAAAAGCTAACACAGGAACAAAATTCTCCAGAGGCAAAGAAAAAA TCAGTGAAGAGGCAGATACAAGCAGAGCTAGAGATTCTTGCAAGGTTAAGACATAGGAACTTGATGAGTCTGAGGGCTTA TGTTCGTGAACCTGATGGATTTTCATTGATGTATGATTATGTGTCCACTGGGAGTCTTTGTGATGTGATGAGTAGAGTGA GGGAGAATGAGTTGGTGCTTGGTTGGGAAGTTAGGCTGAGGGTTGCTGTTGGTGTGGTGAAGGGTCTTCAGTATCTTCAC TTCACTTGTGTGCCTCAGATTCTGCACTACAACTTGAAGCCAACTAATGTGATGTTGGATGCAGAGTTTGAACCCAGATT GGGAGATTATGGATTGGCTAAGCTTCTACCAAACTTGGATAGAGGGACATCTGTCTACAGCCCTCCTGAATGTTTCCATA ATTGCAGGTACACGGACAAGAGTGACATATTCAGTTTTGGCATGATCCTTGGTGTTTTGTTAACTGGCAAGGACCCTACA GATCCATTCTTTGGAGAAGCAGCAAGTGGGGGGAGCTTGGGGTGTTGGCTGAGGCACTTGCAACAAGCAGGTGAAGCAAA AGAAGCTTTAGATAAGAGCATTTTGGGGGAAGAAGGGGAAGAAGATGAGATGCTCATGGCTTTCAGGATTGCTGCTGCAT GCCTCTCTGATGTGCCTGCAGATAGGCCTTGTAGTGATGAGCTTGTTCACATGCTAACACAACTGCACAGTTTTTGA
Protein sequence (LotjaGi1g1v0528700.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFRKRHNPFSLAREFLVFQPLLLVLVLFTLQHNTVHCHGRFSKHISSEPSPPPSEYKDNSRKIIFSIVLGAVTGLVCSVL FAFVVRYVVQYLNRTPILKGPVIFSPKIAPKTLQSALAKENHLLGSSPNGKYYKTVLDNGLTIAVKKLTQEQNSPEAKKK SVKRQIQAELEILARLRHRNLMSLRAYVREPDGFSLMYDYVSTGSLCDVMSRVRENELVLGWEVRLRVAVGVVKGLQYLH FTCVPQILHYNLKPTNVMLDAEFEPRLGDYGLAKLLPNLDRGTSVYSPPECFHNCRYTDKSDIFSFGMILGVLLTGKDPT DPFFGEAASGGSLGCWLRHLQQAGEAKEALDKSILGEEGEEDEMLMAFRIAAACLSDVPADRPCSDELVHMLTQLHSF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 14 | 14 | - | – | |
| Phobius | 1 | 39 | 39 | - | – | |
| SignalP_EUK | 1 | 37 | 37 | - | – | |
| TMHMM | 9 | 31 | 23 | - | – | |
| Phobius | 15 | 30 | 16 | - | – | |
| PANTHER | 18 | 398 | 381 | 2.8E-141 | – | |
| PANTHER | 18 | 398 | 381 | 2.8E-141 | – | |
| Phobius | 31 | 39 | 9 | - | – | |
| Phobius | 40 | 62 | 23 | - | – | |
| Phobius | 63 | 89 | 27 | - | – | |
| TMHMM | 63 | 85 | 23 | - | – | |
| Phobius | 90 | 398 | 309 | - | – | |
| Gene3D | 108 | 200 | 93 | 2.5E-14 | – | |
| ProSiteProfiles | 118 | 398 | 281 | 30.393 | ||
| Pfam | 120 | 321 | 202 | 1.6E-33 | ||
| SUPERFAMILY | 121 | 392 | 272 | 3.32E-52 | ||
| CDD | 124 | 395 | 272 | 4.15596E-92 | – | |
| Gene3D | 201 | 397 | 197 | 1.5E-43 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi1g1v0528700.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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