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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0538900 |
| Transcript ID | LotjaGi1g1v0538900.4 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 70 kDa heat shock protein; TAIR: AT5G02500.1 heat shock cognate protein 70-1; Swiss-Prot: sp|P27322|HSP72_SOLLC Heat shock cognate 70 kDa protein 2; TrEMBL-Plants: tr|K7MVD3|K7MVD3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0538900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:106733613..106736182) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCCGTAAAAGGAGAAGGACCGGCGATCGGAATCGACCTCGGCACCACGTACTCCTGCGTCGGAGTGTGGCAGCATGA TCGCGTTGAGATCATCGCCAATGATCAAGGGAACCGTACCACGCCGTCTTACGTTGCGTTTACTGACTCTGAGAGGTTGA TTGGTGATGCTGCGAAGAATCAGGTTGCCATGAACCCGATCAACACCGTCTTCGGTAATTCATCTGATTCTCCAACTTTC TTTTGTTGATTCACGAATCTTGTACTGTTTATTTGAACGTTTTATTGTTATCAATGATTGTTGACCTCGTTTTAAGTAAT TGAATCTGTTGTTACTTTGGTGTTGAATATTAGTGATTAGGAATTTTGTTGAATTAGTTGGTAGTAGATGTTCTTCTCTT TGATTTGTGTTGTGTTGTAGGGTTTTGAATCTAGAACAATTTGACATGTTAAATGATCATAGTTAAATACTAATTCTATT TATGGTGAAAATTATTACTAGAGATTAGCAATTTTCTTAACTTAACCTATATTTAATATTTTATTGATGTTTAAGTTATT TGTTTAATTTTTAATGTTAATTGTTTTCATAATTTCCTTAAGATGTGACTAATATTGATTTAAATTTTAAACAACAATAA TTACAAGAAGTGACAAAAAAAAATAACTAGAAAAAATTTATTCGACTACAATTATAAGAAAGGAACAGAGGAAATAGATG TTTTTGTTTGTTTCTGTTACATGATGCTTTTGTGTGTGTTGTGGAAGGTTTTCTTTTTGGTGTGGTTTCAGTGGTTGTTT GAGTGATTGTTGTTAACTGAGGATTATTGTTGTTTTGCAGACGCGAAGAGGTTAATTGGTAGGAGAATTAGCGACCCTTC TGTTCAGAGTGACATGAAGTTGTGGCCATTCAAGGTCATTTCTGGTCCTGGAGAGAAACCCATGATTGGTGTTAACTACA AGGGTGAGGACAAGCAGTTTGCAGCTGAGGAAATCTCGTCTATGGTCCTAACAAAGATGAGGGAGATTGCTGAGGCTTTC CTTGGTTCGACCGTGAAGAATGCTGTCGTCACTGTACCTGCATACTTCAATGACTCTCAGCGTCAAGCTACCAAAGATGC CGGTGTTATTGCTGGCCTCAATGTTATGAGAATCATAAATGAGCCAACTGCTGCGGCTATTGCATATGGGCTTGACAAGA AGGCTACCAGTGTTGGTGAGAAGAATGTTTTGATCTTTGATCTTGGAGGTGGTACTTTTGATGTTTCTCTCCTCACCATT GAGGAGGGTATCTTTGAAGTTAAGGCCACAGCTGGAGATACCCATCTTGGAGGAGAGGACTTTGATAACAGAATGGTGAA CCACTTTGTGCAGGAGTTTAAGAGGAAGAACAAGAAGGACATTAGTGGAAACCCAAGAGCTCTCAGGAGGTTGAGAACTT CTTGTGAGAGAGCAAAGAGGACGCTCTCATCCACTGCCCAAACCACCATTGAGATTGATTCTCTGTATGAGGGTGTTGAC TTCTATTCAACCATCACCCGAGCTAGGTTTGAGGAACTTAACATGGACCTCTTTAGGAAGTGTATGGAGCCTGTGGAGAA GTGTCTCAGGGATGCAAAGATGGACAAGAGCACTGTTCATGATGTTGTGCTTGTTGGTGGCTCTACTAGAATTCCCAAAG TTCAGCAGCTGTTGCAGGACTTGTTCAACGGGAAGGATCTGTGCAAGAGCATCAACCCCGACGAAGCTGTTGCTTATGGA GCCGCTGTCCAGGCAGCTATATTGAGTGGTGAAGGCAATGAGAAGGTTCAAGATTTGTTGCTTTTGGATGTCACCCCATT GTCTCTAGGTTTAGAGACTGCTGGAGGTGTCATGACTGTGTTGATTCCAAGGAACACTACAATTCCTACCAAGAAGGAAC AAGTGTTCTCTACATATTCAGACAACCAACCTGGTGTGTTGATTCAAGTATACGAGGGAGAGAGAACAAGAACTAGGGAT AACAACTTGCTGGGCAAGTTTGAGCTTTCAGGCATTCCTCCAGCTCCTCGTGGGGTTCCTCAGATCAATGTTTGCTTTGA CATCGATGCCAATGGTATCTTGAATGTCTCTGCTGAGGACAAGACCACCGGGCAGAAGAACAATATCACCATTACCAACG ACAAGGGAAGATTGTCAAAGGAAGAAATTGAGAAGATGGTTCAAGAAGCAGAGAAGTACAAGTCTGAGGACGAGGAGCAC AAGAAGAAGGTTGAGGCAAAGAACGCTTTGGAGAACTACGCATACAACATGAGAAACACCATCAAGGATGAGAAGATCAG TTCAAAGCTTTCTTCAGAGGACAAGACAAAGATCGACGATGCCATTGAGCAGGCCATTCAATGGCTTGATGCAAATCAGC TTGCTGAAGCTGATGAATTTGAAGACAAGATGAAGGAGCTCGAGAGCATATGCAATCCTATCATTGCCAAAATGTACCAA GGAGGTGCTGCTCCTGGTGCTGAAGTGGATGATGATGCTCCACCTGCTGCTGGTAGCGGTGCTGGCCCGAAGATTGAGGA GGTCGATTAA
CDS sequence (LotjaGi1g1v0538900.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGTTGTGGCCATTCAAGGTCATTTCTGGTCCTGGAGAGAAACCCATGATTGGTGTTAACTACAAGGGTGAGGACAA GCAGTTTGCAGCTGAGGAAATCTCGTCTATGGTCCTAACAAAGATGAGGGAGATTGCTGAGGCTTTCCTTGGTTCGACCG TGAAGAATGCTGTCGTCACTGTACCTGCATACTTCAATGACTCTCAGCGTCAAGCTACCAAAGATGCCGGTGTTATTGCT GGCCTCAATGTTATGAGAATCATAAATGAGCCAACTGCTGCGGCTATTGCATATGGGCTTGACAAGAAGGCTACCAGTGT TGGTGAGAAGAATGTTTTGATCTTTGATCTTGGAGGTGGTACTTTTGATGTTTCTCTCCTCACCATTGAGGAGGGTATCT TTGAAGTTAAGGCCACAGCTGGAGATACCCATCTTGGAGGAGAGGACTTTGATAACAGAATGGTGAACCACTTTGTGCAG GAGTTTAAGAGGAAGAACAAGAAGGACATTAGTGGAAACCCAAGAGCTCTCAGGAGGTTGAGAACTTCTTGTGAGAGAGC AAAGAGGACGCTCTCATCCACTGCCCAAACCACCATTGAGATTGATTCTCTGTATGAGGGTGTTGACTTCTATTCAACCA TCACCCGAGCTAGGTTTGAGGAACTTAACATGGACCTCTTTAGGAAGTGTATGGAGCCTGTGGAGAAGTGTCTCAGGGAT GCAAAGATGGACAAGAGCACTGTTCATGATGTTGTGCTTGTTGGTGGCTCTACTAGAATTCCCAAAGTTCAGCAGCTGTT GCAGGACTTGTTCAACGGGAAGGATCTGTGCAAGAGCATCAACCCCGACGAAGCTGTTGCTTATGGAGCCGCTGTCCAGG CAGCTATATTGAGTGGTGAAGGCAATGAGAAGGTTCAAGATTTGTTGCTTTTGGATGTCACCCCATTGTCTCTAGGTTTA GAGACTGCTGGAGGTGTCATGACTGTGTTGATTCCAAGGAACACTACAATTCCTACCAAGAAGGAACAAGTGTTCTCTAC ATATTCAGACAACCAACCTGGTGTGTTGATTCAAGTATACGAGGGAGAGAGAACAAGAACTAGGGATAACAACTTGCTGG GCAAGTTTGAGCTTTCAGGCATTCCTCCAGCTCCTCGTGGGGTTCCTCAGATCAATGTTTGCTTTGACATCGATGCCAAT GGTATCTTGAATGTCTCTGCTGAGGACAAGACCACCGGGCAGAAGAACAATATCACCATTACCAACGACAAGGGAAGATT GTCAAAGGAAGAAATTGAGAAGATGGTTCAAGAAGCAGAGAAGTACAAGTCTGAGGACGAGGAGCACAAGAAGAAGGTTG AGGCAAAGAACGCTTTGGAGAACTACGCATACAACATGAGAAACACCATCAAGGATGAGAAGATCAGTTCAAAGCTTTCT TCAGAGGACAAGACAAAGATCGACGATGCCATTGAGCAGGCCATTCAATGGCTTGATGCAAATCAGCTTGCTGAAGCTGA TGAATTTGAAGACAAGATGAAGGAGCTCGAGAGCATATGCAATCCTATCATTGCCAAAATGTACCAAGGAGGTGCTGCTC CTGGTGCTGAAGTGGATGATGATGCTCCACCTGCTGCTGGTAGCGGTGCTGGCCCGAAGATTGAGGAGGTCGATTAA
Protein sequence (LotjaGi1g1v0538900.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKLWPFKVISGPGEKPMIGVNYKGEDKQFAAEEISSMVLTKMREIAEAFLGSTVKNAVVTVPAYFNDSQRQATKDAGVIA GLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQ EFKRKNKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEGVDFYSTITRARFEELNMDLFRKCMEPVEKCLRD AKMDKSTVHDVVLVGGSTRIPKVQQLLQDLFNGKDLCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGL ETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDAN GILNVSAEDKTTGQKNNITITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTIKDEKISSKLS SEDKTKIDDAIEQAIQWLDANQLAEADEFEDKMKELESICNPIIAKMYQGGAAPGAEVDDDAPPAAGSGAGPKIEEVD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 538 | 538 | 0.0 | – | |
| Gene3D | 1 | 29 | 29 | 6.6E-134 | – | |
| Pfam | 1 | 529 | 529 | 3.3E-218 | ||
| PANTHER | 1 | 538 | 538 | 0.0 | ||
| SUPERFAMILY | 2 | 102 | 101 | 7.12E-33 | ||
| Gene3D | 30 | 295 | 266 | 6.6E-134 | – | |
| PRINTS | 57 | 77 | 21 | 1.8E-65 | – | |
| Gene3D | 103 | 282 | 180 | 6.6E-134 | – | |
| SUPERFAMILY | 109 | 299 | 191 | 7.41E-69 | ||
| ProSitePatterns | 114 | 127 | 14 | - | ||
| PRINTS | 120 | 130 | 11 | 1.8E-65 | – | |
| Gene3D | 146 | 223 | 78 | 6.6E-134 | – | |
| PRINTS | 248 | 264 | 17 | 1.8E-65 | – | |
| ProSitePatterns | 251 | 265 | 15 | - | ||
| PRINTS | 280 | 300 | 21 | 1.8E-65 | – | |
| Gene3D | 298 | 426 | 129 | 3.4E-64 | ||
| SUPERFAMILY | 303 | 460 | 158 | 4.05E-65 | ||
| PRINTS | 307 | 326 | 20 | 1.8E-65 | – | |
| PRINTS | 388 | 404 | 17 | 1.8E-65 | – | |
| Gene3D | 427 | 530 | 104 | 9.2E-40 | ||
| Coils | 432 | 452 | 21 | - | – | |
| SUPERFAMILY | 454 | 535 | 82 | 4.45E-30 | ||
| MobiDBLite | 531 | 558 | 28 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0538900.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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