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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0549400 |
| Transcript ID | LotjaGi1g1v0549400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Mannose-6-phosphate isomerase; TAIR: AT3G02570.1 Mannose-6-phosphate isomerase, type I; Swiss-Prot: sp|Q9M884|MPI1_ARATH Mannose-6-phosphate isomerase 1; TrEMBL-Plants: tr|Q5BMC5|Q5BMC5_CYATE Phosphomannose isomerase; Found in the gene: LotjaGi1g1v0549400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:107992049..107997433) extracted from Lotus japonicus Gifu genome v1.2.
CGTTAAAGTTTGATTTATACAGATAATTGACGCAATTGAGGAACATTCACCCCTAAAAAAAGGACAAAACAAAACACGGT ACTGAGATTAAGAAACTTCATAGATCGATCCCATTCCTCTGTAACTCGCAGATTAAGGTTGGTTTCGATTCCGATGTTTG CCCATGTCCTCATTCATGAAATTTCGTGCTCTTCGAGAAATGGTGACATAGAAGATTCAGCATTGCATTGCAATGTGTGA AGAACAAGATAAGATAGACAGATAGATAGATCTTACACAACACGCATTCATTCATACGCATACGCATTCAATTCATCACA AGAAGATGGAATTGCACACACCCCCACCCATCTCTTTCTCTCTCTCTCTAACCCCTGTCGCTTTCTCTCTCTCTCAACTT TCCCTCTCTTGGTCAAGCTTCAAATACCAGTTGCAATGACCCTTCATTCCCAATTCACATTCTAACACTTTTCCTTCACA AAATTCTCCTCTCTTTTTCCCCTCTCTCTCTCTCTCTCTCTCTTGCTAGCTACATACAACGATGGGAGATTTGGAGAATG GTATCGAGTTGCATGACCATCTTCAGAAGCTTCATTGTTCTGTGAAGAATTACGATTGGGGTTTACCTGGTCGAGTTTCT CAAGTTGCGAGGCTCTTCTCGCTGAATTCTGGGTCGGAATTCGATCCGGAGGAGCCTTATGCTGAGCTTTGGATGGGTAC CCTTGATTCAGGGCCATCGTTTGTGCTGTCCAATGGGGCCAAGAGGGCTACCCTGAAGGCTTGGATTTCAGAGAACCCGG ATGTGCTTGGTGATAAGGTTCTTCAGAAATGGGGTGCTGATCTCCCTTTCTTGTTTAAGGTGCGTGTGATCATCTAAATG GGTGTTTTCATTTTAGCTCAAGCTTGAATTTTGAGTTCCCTTTCTTGTTTAAAGTGTGTGTGATGCCCCCCTTTTTGTGT GTGTGTAAATGGGTGTCTAATTTTAGCACAAGATTGAATTTTGAGTTCCCTTTCTTGTTTAAAGTTTGTGTGATGCCACT TTGTATTTTTGGGTAAATGGGTGTCTTAAATTTAGCACAAGGTTGAATATTGAGTTCCCTTTCTTGTTTAAAGTGTGTGA CCCCTTTTTTGTGTTAATGGGTGTGTAGATTATAGCACAAGCTTGAATTTTGTGTTCGAATTATCTGGCTTTTCATGCAT TAGGTGCTGTCTGTGGGGAAAGCCTTGTCCATACAGGCTCACCCGGATAAGGAGTTGGCTAGGACTCTGCATAAATTGCT GCCTGATATGTATAAGGATGGGAATCACAAACCTGAGATGGCTCTGGCAATGACAGATTTTGAGGCCCTTTGTGGATTTA TCACTTTTAAGGTACTTGATTATGTGGAGATTTATTTATTTATTTTAGTTCTTTATGAGTGCTTAAGTTGATTGTGTTGG GAAGAATTACTTTTGAATGTTCAGGGAACTGGTTAGTTTTCTGTCCAATTTAAAATCGCTGTTGTCTTGAATTTTCTGTC TGTAATATAATTGTTGGTGGTAAGTAAATTAGGAGTTGTTTTTCTTGAATTTATTGTTAATTTAATTTGTTAAAAGTTGC TTCTTCTAAAAGCTAAAATTAAGTATTCATGTACTTTGAGTGATTGGAAAAGAACTGTCCACCTGTAAAAGTATAATTCC CTAATGATGTGTCAATCACACTTCCCCTTGTTCAAAGGCTTCTTTCTTATGCAATGGAACATGTGATAGCCAACCAAACA ACTAATAAAGATAGAACAGTCAAATGATAACTGTTGGAGTTGATAAAAACATGAAACTGTTGGTTGCATAGCAAATAGTG GAAGTATGGTATCTTTTAATTTTAGATCTGTTAGTTTGGGACTGTCAAACATCTGTTGTGCTGCTTTAACTTGAGGTATC TGTGAGATTGGATTAGGCTTTGAGGGGGTTTTGATGTCTGTTGTTATTTTCTCAGTTCACTGGTAAATCTGGCTCTGCAT GATGTGAATTTACACATTGGTATAATAATGAGCAGCTTAGATATATGAATTCAGGGAATCCATTCAATTAACTCGTACAA TAGGTAGTTTGTTCAGGTTCGAGTCTTGTGAACGGAAAAACTCCGCTGGGAGAGCTAGTCCCACCAAGATGTATATGTTC TCGGCTCGAACAGGATTGCCTCTCGTGGAGGATACTTGTATTTGAACAAAAAAATTCAATTAACTCATGAGTTTATAACA TGATGTTGCCAGGGCTTGTTTTATGATTCTGTTAGATGGGAATGTTGTACCTTATGTTGTCAATCCTTATGCGCTAGAAA GCCTATGTTCATTCAAGCAAGCCAGTTATAGTTAGCAAAGCTGCTGTTGACTGCTTGAAAACTAAAATCTTACATGTAGA GAGTTTTCGTACTTTGAAACTGAATTCTGTGCTTTTAGTCACGATATTAATTCAAAGATGTGTACTGTAAAAGTTCACGT TATTCATTGTTCCTTATAAGGGGTGCTTGAGTTGTTGTGTAGATCAATGAGTCTTTTTAGTTTTTTTCCCCTTTTCCTTT ATTGGTCTGTCTTTTTAAGGGTTGAAGTTTGCTTTCGGGAGATGCACTGACATTTGTTACTGGTTTAGTTTAATGCTTCA TTGTAATGTTATTCAGTTAGCAAATAAGCAATCTTCTTTGTTATTGTTTAGGAGCTTAAGGCTGTGCTTCGTACTGTTCC TGAAGTTGTGGAACTGGTTGGTGTTGCAAATGCAAACCTGGTCTTACAAACTAGCGATTGGGATGGTGAAGAGGAGGTAA AACCTGTTTTGCAAGCAGTGTTCACCCACCTCATGTCAGCTGGTAAGGAGATGGTAACTGTTGCAGTAAACAGATTGAAA AGTCGCCTGCATAAGGAAATTGAGGTTAGTTGATTACTTGCACTGTTTCGCTTTAAGAGTTCAGATCACGAGTTAAATCA ATTTTATACCATAAAGTTATTTGTATATAATGTATAATCTCTGTGAATGTGGGACTCATCCAATTGACATATTGTAGTGA GGATCAGAAATATGTGGTTTTGGTATGTTCATACGGTTGCATAATATTTATGGTCAAAAGTGAATACTACTATTCTGCAA CCGATTGTTATCTCCTTTTACTTTTGTTCCTTGACTTCATACATGTTTGGGAAGCTTTCTACAATTGATTATGAAATCAG AATCAATTTTGAGGAGGAACTTCTGTAAGTAACTTCTAGGTTTCATAGTTAATCATGATGAAAGAGAAGCTGATCCAAAC ACGTTACTCCTAGTCCTCCAGGTTGTGTTGGATAGAGGATACTGTGGAACCTTTACTATTTAGACGACTTACCTTTTTTT TTTCTTTCCAATTTTAATCATATTAAGCTGCTATATATAATGACAAAGTTTATCTCTTAAATGTTTTTCTTTTCTTTTTG GTTGAAATTTGTATCTTACCAGCATGATTCCATAATATTCTCATTTTGCATCAGGTGAGGCCATTGACAGATAAGGAACA GCTGGTGTTGCGGTTGGAAAAGCAATACCCAGCTGATATTGGTGTCATAGCAGCCTTCTTTCTCAACTATGTCAAACTCA ATCCTGGTGAAGCATTGGTCCTAGGGGCAAATGAACCACACGCATATTTATCCGGGGAGTGCGTTGAATGCATGGCAACT TCTGACAATGTTGTTCGAGCTGGCCTAACTCCCAAACACAGAGATGTCCAGACTCTTTGCTCCATGCTCACATACAAACA GGTAACTGAGACATCAAGGCTGTTGATGCAGTTTTTCGGTCCGATATTCAGTTTACTAATAGCAATTTACTGTATTTCAT TTTCCAAACCCATGATCAATTCTATATTCTAAAAGCTACAAAGAGTGGCTTCATTAATCTTAAATTGATTCTACATGACG TGTCCAGCAGTTGATTTTCCAAACATGCTGTCACATGTGACCACTTAGGCATGTGTCAATTTTCTTTCTTACTACAAATT TCATCTCGTCCATGGATTGATCCGTATTGGTGTCTTCTCTTTTGTTTCCTGAATCTCTGGACTTCTTCATGGTTTGAGGC CTGGATTGTTTGGTTGGTGTGCTACTTGTTTGTGCAATACTGGCTCAATAGTGAGCATATGCATGCATATTTTAGTAGAA AACTGAACTCACATTTTGCACTTGAAAAGTGAAGCCACATTTACCATTGTCTCAACTTTGAGGGAAGATATAGATTTTGA AATGGAACTCGGTGCATGTTTGAAATTTCTTATATCATTGATTCTAAAGTCAAAATTAATTATGGGTTAAGCTTATGTGA GTAGCTTCTGAATCTCAAAATTGATTTTGAGAAAAAAGAAGCTCATCCAAACATGCTATCATTATATTTTTTTTTATAAG CACATGCTATCATTATATGACATGAGTGTGAGACTCTTGGTGTTTAAGGTCAATTTTTTCTCTATTATCTTGCAGGGTTT TCCTGAGATTCTGCGAGGAGTTCGTCTAAACCCATATGTAAGTAGATACACTCCACCATTTGAGGAATTCGAGATTGATC GATGTGTTCTTCCTCAAGGGGAAAGAGTGGTGTTCCCAGCAGTTCCAGGTCCTTCCATCTTTTTGATAACAGTTGGGGAA GGAATGATGAATACAGGGTCTTCACCAATAGGACATGCAGTCACTGAAGGTGATGTTCTTTTTGCAGCTGCTAACACTGA AGTTAGCATTACTAGTGCATTCGAGTTGCACCTGTACAGAACAGGGGTTAATAGCAAAGTTTTTCAGCTTTCTTAAGTTA AAACCAGATGCCCTTTGTTTATTGTTGTTCATTTTATTTATTTATATAAGCCCTATGCTTTTAGAGAGACAAATAATGAA GATCATGTGTTACATCATGTAATAGCAGCAATTTAGTGTACATTAGCAACAGTTATAAGATAGCATACAAGTGAGAGAAG TGATCATTACAGAAATGTGGGATTGTAATTCGTTTATTCATCAAACTAATGTTCGTTTATCAAATCATACAATAAATGAA GTTCCTATAAATATTTTTTTGTCTATGCTTGTGTTGAATTTTGTTGAACTGATCGAGCTAAACTAAAATTATGAAGATGA AACATGAGTCTTGATACAAGACTGTTTAAATTAGTCCCCTACGATGTCATAAGCAATTATAACATGTGACACTATGCAAA AGAAATGGAAACTTGAACCAGTGTTGCAACTTTCAACTGCAAGTTGCAACATTGTGGAGTAAATATAAAAACAGCCAAAA ATCCCTTAAGTAAAATTTGAGACTTGAGGGGAGTTTAGAAGCAGTTAACAAAACTCGTATTGGGCTATGTTTGCAATCTT GAGCAGAATGCAAATGGAATAATTC
CDS sequence (LotjaGi1g1v0549400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGAGATTTGGAGAATGGTATCGAGTTGCATGACCATCTTCAGAAGCTTCATTGTTCTGTGAAGAATTACGATTGGGG TTTACCTGGTCGAGTTTCTCAAGTTGCGAGGCTCTTCTCGCTGAATTCTGGGTCGGAATTCGATCCGGAGGAGCCTTATG CTGAGCTTTGGATGGGTACCCTTGATTCAGGGCCATCGTTTGTGCTGTCCAATGGGGCCAAGAGGGCTACCCTGAAGGCT TGGATTTCAGAGAACCCGGATGTGCTTGGTGATAAGGTTCTTCAGAAATGGGGTGCTGATCTCCCTTTCTTGTTTAAGGT GCTGTCTGTGGGGAAAGCCTTGTCCATACAGGCTCACCCGGATAAGGAGTTGGCTAGGACTCTGCATAAATTGCTGCCTG ATATGTATAAGGATGGGAATCACAAACCTGAGATGGCTCTGGCAATGACAGATTTTGAGGCCCTTTGTGGATTTATCACT TTTAAGGAGCTTAAGGCTGTGCTTCGTACTGTTCCTGAAGTTGTGGAACTGGTTGGTGTTGCAAATGCAAACCTGGTCTT ACAAACTAGCGATTGGGATGGTGAAGAGGAGGTAAAACCTGTTTTGCAAGCAGTGTTCACCCACCTCATGTCAGCTGGTA AGGAGATGGTAACTGTTGCAGTAAACAGATTGAAAAGTCGCCTGCATAAGGAAATTGAGGTGAGGCCATTGACAGATAAG GAACAGCTGGTGTTGCGGTTGGAAAAGCAATACCCAGCTGATATTGGTGTCATAGCAGCCTTCTTTCTCAACTATGTCAA ACTCAATCCTGGTGAAGCATTGGTCCTAGGGGCAAATGAACCACACGCATATTTATCCGGGGAGTGCGTTGAATGCATGG CAACTTCTGACAATGTTGTTCGAGCTGGCCTAACTCCCAAACACAGAGATGTCCAGACTCTTTGCTCCATGCTCACATAC AAACAGGGTTTTCCTGAGATTCTGCGAGGAGTTCGTCTAAACCCATATGTAAGTAGATACACTCCACCATTTGAGGAATT CGAGATTGATCGATGTGTTCTTCCTCAAGGGGAAAGAGTGGTGTTCCCAGCAGTTCCAGGTCCTTCCATCTTTTTGATAA CAGTTGGGGAAGGAATGATGAATACAGGGTCTTCACCAATAGGACATGCAGTCACTGAAGGTGATGTTCTTTTTGCAGCT GCTAACACTGAAGTTAGCATTACTAGTGCATTCGAGTTGCACCTGTACAGAACAGGGGTTAATAGCAAAGTTTTTCAGCT TTCTTAA
Protein sequence (LotjaGi1g1v0549400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGDLENGIELHDHLQKLHCSVKNYDWGLPGRVSQVARLFSLNSGSEFDPEEPYAELWMGTLDSGPSFVLSNGAKRATLKA WISENPDVLGDKVLQKWGADLPFLFKVLSVGKALSIQAHPDKELARTLHKLLPDMYKDGNHKPEMALAMTDFEALCGFIT FKELKAVLRTVPEVVELVGVANANLVLQTSDWDGEEEVKPVLQAVFTHLMSAGKEMVTVAVNRLKSRLHKEIEVRPLTDK EQLVLRLEKQYPADIGVIAAFFLNYVKLNPGEALVLGANEPHAYLSGECVECMATSDNVVRAGLTPKHRDVQTLCSMLTY KQGFPEILRGVRLNPYVSRYTPPFEEFEIDRCVLPQGERVVFPAVPGPSIFLITVGEGMMNTGSSPIGHAVTEGDVLFAA ANTEVSITSAFELHLYRTGVNSKVFQLS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 9 | 426 | 418 | 1.9E-205 | – | |
| PANTHER | 9 | 426 | 418 | 1.9E-205 | ||
| PIRSF | 11 | 425 | 415 | 5.9E-124 | ||
| SUPERFAMILY | 12 | 416 | 405 | 9.27E-111 | ||
| TIGRFAM | 13 | 410 | 398 | 2.5E-71 | ||
| Pfam | 14 | 383 | 370 | 5.9E-105 | ||
| Gene3D | 16 | 416 | 401 | 8.4E-133 | ||
| PRINTS | 17 | 35 | 19 | 1.4E-72 | ||
| Gene3D | 18 | 302 | 285 | 8.4E-133 | ||
| PRINTS | 52 | 67 | 16 | 1.4E-72 | ||
| PRINTS | 101 | 122 | 22 | 1.4E-72 | ||
| PRINTS | 136 | 159 | 24 | 1.4E-72 | ||
| ProSitePatterns | 136 | 144 | 9 | - | ||
| Gene3D | 160 | 327 | 168 | 8.4E-133 | – | |
| PRINTS | 247 | 262 | 16 | 1.4E-72 | ||
| PRINTS | 263 | 282 | 20 | 1.4E-72 | ||
| PRINTS | 282 | 301 | 20 | 1.4E-72 | ||
| ProSitePatterns | 282 | 307 | 26 | - | ||
| PRINTS | 301 | 320 | 20 | 1.4E-72 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Mannose-6-phosphate isomerase activity | Catalysis of the reaction: D-mannose 6-phosphate = D-fructose 6-phosphate. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. | ||
| Molecular function | Zinc ion binding | Interacting selectively and non-covalently with zinc (Zn) ions. | ||
| Biological process | GDP-mannose biosynthetic process | The chemical reactions and pathways resulting in the formation of GDP-mannose, a substance composed of mannose in glycosidic linkage with guanosine diphosphate. |
Expression pattern of LotjaGi1g1v0549400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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