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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0562400 |
| Transcript ID | LotjaGi1g1v0562400.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Amidophosphoribosyltransferase; TAIR: AT2G16570.1 GLN phosphoribosyl pyrophosphate amidotransferase 1; Swiss-Prot: sp|P52418|PUR1_SOYBN Amidophosphoribosyltransferase, chloroplastic; TrEMBL-Plants: tr|A0A0L9V6R9|A0A0L9V6R9_PHAAN Amidophosphoribosyltransferase; Found in the gene: LotjaGi1g1v0562400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:109447181..109449265) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCTGCGTCAAATTTCTCTACCCTGTCCTCCTCCTCCTCCTCCTTCTCCAAATCCAAACCCTTCACCAACACACCTTG TTTTCCTGGCAACAAAACCCTCCACAACCCCACCTCGTTTCCCAATCCAACAACTCTTTCCCATGCCCACAAACCCCCTT ACCCATCACCATGCAAAAACCACAACACCACATTCCCAGAACCTCTCTGCAACGACGACGAAGACCAAAAGCCCCGTGAA GAGTGCGGCGTGGTGGGTATCTACGGCGACCCAGAGGCCTCTCGTCTCTGCTACCTCGCCCTCCACGCCCTCCAGCACCG CGGCCAGGAGGGCGCCGGCATCGTCACCGTGCACAACAACAAAATCTTCCAATCAGTAACCGGTGTTGGCCTCGTCGCCG ACGTCTTCACCGAGGCCAAGCTTGATCAATTGCCCGGAACTCTGGCTATTGGCCATGTACGTTACTCAACCGCAGGCCAA TCCATGCTGAAAAACGTGCAGCCTTTTGTTGCAGGGTACCGTTTTGGCTCTGTTGGTGTTGCACATAATGGTAACTTAGT CAATTACCGAAGCTTAAGGGAAAAACTTGAAGAAAACGGCTCCATTTTCAACACTAGTTCTGATACAGAGGTTGTGCTTC ACCTCATTGCTACGTCAAAGCAGAGACCATTCATATTGAGAATCGTTGATGCCTGCGAGAAGCTTAAAGGGGCTTACTCT TTTGTGTTTGTTACAGAGGATAAGCTTGTTGCTGTGAGGGACCCTTTTGGTTTTCGACCATTGGTTATGGGGAAAAGGAG TAATGGTGCTGTTGTTTTCGCCTCTGAGACGTGTGCTCTTGATTTGATTGAAGCAGAGTACGAGAGGGAGGTGTACCCTG GTGAGGTTTTGGTGGTGGATAAAAATGGTCTTCAATCTCTCTGCCTTGTGTCTCATCCAGAGCCGAAGCAGTGTATCTTT GAGCATATTTACTTTTCACTCCCAAGTTCTGTTGTTTTTGGGAAATCTGTGTATGAATCTCGCAGGTTGTTTGGGGAAAT TCTTGCCACTGAGAGCCCTGTTGAGTGTGATGTTGTGATTGCAGTTCCGGATTCTGGTGTGGTTGCTGCACTTGGTTATG CTGCAAAAGCAGGGGTTCCTTTTCAGCAGGGGTTGATCAGGTGATGATATGAAATTATACCGCTATGTGAGAGGTCCAAG TCGGTCTTACCTTTACATTTTTGCAAGGATTAATTATACACCTTGGACCTGCGGCTGCAAAATCACATGACAAAAACTTT ACTATTGCGCTGAGACTCAATCTTTTGCTAACTCTTATTTATTCTAATAAGGAACATATGAAAACTGATTTAAGTCAACA TATATTATTAAATTTGATAATATAATCCTAATTACAGAGATATATAGTATCTTGATCTGAATAGAGATATAGTTTCACTT ATACTTAAATTATATTCTATGCTATCAGGTCTCACTATGTGGGGAGGACTTTCATTGAGCCGTCACAGAAGATTAGGGAC CTTGGTGTGAAGTTGAAGCTCTCACCGGTAAAAGCTGTGCTTGAAGGCAAGAGGGTTGTGGTTGTGGATGACTCTATTGT GAGGGGAACCACATCTTCCAAAATTGTGAGGCTGATCAAGGAAGCAGGTGCAAAAGAAGTTCACATGAGGATTGCATGTC CACCAATTATCGGATCATGTTATTATGGGGTGGACACTCCAAGTTCAGAGGAATTGATTTCAAATAGAATGAGTGTGGAT GAAATACGGGAGTTTATTGGATCAGATTCACTCGCTTTTCTTCCACTTGATTGCTTGAAGAAATTGTTGGGAGAAGATGA CTCTCCTAATTTCTGTTATGCTTGCTTCTCCGGGAGGTATCCTGTTGAACCTACTGAACTTGAAGTCAAGAGTGTTGGTA ACTTAGTGGATAATGGCTTAAATGGGAGTTTGGAATCTATTGATGAGAGTTTGGTTCAAGCAAACCGAAATCAGAAAGAG GTGAAGATTGCTAGTATCTAATAATTGTCCGATTTGTCTATTTGAGATTTTGCAGTACAGGAATCCCATATAAGGTATGG AGTAA
CDS sequence (LotjaGi1g1v0562400.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGCGTCAAATTTCTCTACCCTGTCCTCCTCCTCCTCCTCCTTCTCCAAATCCAAACCCTTCACCAACACACCTTG TTTTCCTGGCAACAAAACCCTCCACAACCCCACCTCGTTTCCCAATCCAACAACTCTTTCCCATGCCCACAAACCCCCTT ACCCATCACCATGCAAAAACCACAACACCACATTCCCAGAACCTCTCTGCAACGACGACGAAGACCAAAAGCCCCGTGAA GAGTGCGGCGTGGTGGGTATCTACGGCGACCCAGAGGCCTCTCGTCTCTGCTACCTCGCCCTCCACGCCCTCCAGCACCG CGGCCAGGAGGGCGCCGGCATCGTCACCGTGCACAACAACAAAATCTTCCAATCAGTAACCGGTGTTGGCCTCGTCGCCG ACGTCTTCACCGAGGCCAAGCTTGATCAATTGCCCGGAACTCTGGCTATTGGCCATGTACGTTACTCAACCGCAGGCCAA TCCATGCTGAAAAACGTGCAGCCTTTTGTTGCAGGGTACCGTTTTGGCTCTGTTGGTGTTGCACATAATGGTAACTTAGT CAATTACCGAAGCTTAAGGGAAAAACTTGAAGAAAACGGCTCCATTTTCAACACTAGTTCTGATACAGAGGTTGTGCTTC ACCTCATTGCTACGTCAAAGCAGAGACCATTCATATTGAGAATCGTTGATGCCTGCGAGAAGCTTAAAGGGGCTTACTCT TTTGTGTTTGTTACAGAGGATAAGCTTGTTGCTGTGAGGGACCCTTTTGGTTTTCGACCATTGGTTATGGGGAAAAGGAG TAATGGTGCTGTTGTTTTCGCCTCTGAGACGTGTGCTCTTGATTTGATTGAAGCAGAGTACGAGAGGGAGGTGTACCCTG GTGAGGTTTTGGTGGTGGATAAAAATGGTCTTCAATCTCTCTGCCTTGTGTCTCATCCAGAGCCGAAGCAGTGTATCTTT GAGCATATTTACTTTTCACTCCCAAGTTCTGTTGTTTTTGGGAAATCTGTGTATGAATCTCGCAGGTTGTTTGGGGAAAT TCTTGCCACTGAGAGCCCTGTTGAGTGTGATGTTGTGATTGCAGTTCCGGATTCTGGTGTGGTTGCTGCACTTGGTTATG CTGCAAAAGCAGGGGTTCCTTTTCAGCAGGGGTTGATCAGGTCTCACTATGTGGGGAGGACTTTCATTGAGCCGTCACAG AAGATTAGGGACCTTGGTGTGAAGTTGAAGCTCTCACCGGTAAAAGCTGTGCTTGAAGGCAAGAGGGTTGTGGTTGTGGA TGACTCTATTGTGAGGGGAACCACATCTTCCAAAATTGTGAGGCTGATCAAGGAAGCAGGTGCAAAAGAAGTTCACATGA GGATTGCATGTCCACCAATTATCGGATCATGTTATTATGGGGTGGACACTCCAAGTTCAGAGGAATTGATTTCAAATAGA ATGAGTGTGGATGAAATACGGGAGTTTATTGGATCAGATTCACTCGCTTTTCTTCCACTTGATTGCTTGAAGAAATTGTT GGGAGAAGATGACTCTCCTAATTTCTGTTATGCTTGCTTCTCCGGGAGGTATCCTGTTGAACCTACTGAACTTGAAGTCA AGAGTGTTGGTAACTTAGTGGATAATGGCTTAAATGGGAGTTTGGAATCTATTGATGAGAGTTTGGTTCAAGCAAACCGA AATCAGAAAGAGTACAGGAATCCCATATAA
Protein sequence (LotjaGi1g1v0562400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAASNFSTLSSSSSSFSKSKPFTNTPCFPGNKTLHNPTSFPNPTTLSHAHKPPYPSPCKNHNTTFPEPLCNDDEDQKPRE ECGVVGIYGDPEASRLCYLALHALQHRGQEGAGIVTVHNNKIFQSVTGVGLVADVFTEAKLDQLPGTLAIGHVRYSTAGQ SMLKNVQPFVAGYRFGSVGVAHNGNLVNYRSLREKLEENGSIFNTSSDTEVVLHLIATSKQRPFILRIVDACEKLKGAYS FVFVTEDKLVAVRDPFGFRPLVMGKRSNGAVVFASETCALDLIEAEYEREVYPGEVLVVDKNGLQSLCLVSHPEPKQCIF EHIYFSLPSSVVFGKSVYESRRLFGEILATESPVECDVVIAVPDSGVVAALGYAAKAGVPFQQGLIRSHYVGRTFIEPSQ KIRDLGVKLKLSPVKAVLEGKRVVVVDDSIVRGTTSSKIVRLIKEAGAKEVHMRIACPPIIGSCYYGVDTPSSEELISNR MSVDEIREFIGSDSLAFLPLDCLKKLLGEDDSPNFCYACFSGRYPVEPTELEVKSVGNLVDNGLNGSLESIDESLVQANR NQKEYRNPI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 19 | 19 | - | – | |
| MobiDBLite | 1 | 60 | 60 | - | – | |
| MobiDBLite | 1 | 46 | 46 | - | – | |
| PANTHER | 60 | 553 | 494 | 0.0 | – | |
| PANTHER | 60 | 553 | 494 | 0.0 | – | |
| Hamap | 81 | 524 | 444 | 45.535 | ||
| CDD | 82 | 333 | 252 | 6.91291E-151 | ||
| Gene3D | 82 | 526 | 445 | 4.3E-155 | ||
| SUPERFAMILY | 82 | 318 | 237 | 1.72E-67 | ||
| ProSiteProfiles | 82 | 302 | 221 | 48.088 | ||
| TIGRFAM | 82 | 525 | 444 | 7.1E-152 | ||
| Pfam | 161 | 280 | 120 | 1.1E-25 | ||
| SUPERFAMILY | 318 | 530 | 213 | 6.73E-66 | ||
| CDD | 340 | 456 | 117 | 1.85783E-21 | ||
| Pfam | 341 | 453 | 113 | 5.4E-10 | ||
| Gene3D | 342 | 506 | 165 | 4.3E-155 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Amidophosphoribosyltransferase activity | Catalysis of the reaction: 5-phospho-beta-D-ribosylamine + L-glutamate + diphosphate = 5-phospho-alpha-D-ribose 1-diphosphate + L-glutamine + H(2)O. | ||
| Biological process | Purine nucleobase biosynthetic process | The chemical reactions and pathways resulting in the formation of purine nucleobases, one of the two classes of nitrogen-containing ring compounds found in DNA and RNA, which include adenine and guanine. | ||
| Biological process | Nucleoside metabolic process | The chemical reactions and pathways involving a nucleoside, a nucleobase linked to either beta-D-ribofuranose (a ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleoside), e.g. adenosine, guanosine, inosine, cytidine, uridine and deoxyadenosine, deoxyguanosine, deoxycytidine and thymidine (= deoxythymidine). |
Expression pattern of LotjaGi1g1v0562400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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