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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0592300 |
| Transcript ID | LotjaGi1g1v0592300.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Peptidylprolyl isomerase; TAIR: AT3G25230.1 rotamase FKBP 1; Swiss-Prot: sp|Q38931|FKB62_ARATH Peptidyl-prolyl cis-trans isomerase FKBP62; TrEMBL-Plants: tr|I3T6U6|I3T6U6_LOTJA Peptidylprolyl isomerase; Found in the gene: LotjaGi1g1v0592300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:113219526..113225947) extracted from Lotus japonicus Gifu genome v1.2.
ATGGAAGAAGTGATGGACATACCCCCAATGGAGGCGATGAACGAGGACTTCGATCTCCCCGAAGACAAGGTGGGCGAGGA GAGAGAGATCGGCAACAGTGGTCTCAGGAAGAAGCTCCTCAAGGAAGGTCAAGGTTGGGAAACCCCTGAAGTCGGCGACG AAGTCCAAGGTAGTACAAACAATCTCCGTGTTCTTCTCCTTCATTTTAGGATTTTTGTTTGTTTTGATTTAATTTGAGGT TTTTGTGTTTGATTGATAGTTCACTACACGGGGACCTTGCTTGACGGGTCGAAATTCGATTCAAGCCGCGACAGGGATGC TCCTTTCTCCTTCACGCTCGGACAGGGTCGGTAACGTCATTCAACTATTATTTTTCCTTTTTTTTTTATGTATATTGTGA ACTGAATTGTGAGTGTGTGAGACTCTGAGTATGAAGTTTGTGAAAGTAAAAGATTCATGGGACATCACATTTGCTCAATA ATAATGCTTCGTGGTATACCCCATTTTGGAGATAGGAAGAGAATAGGGATAACTGATTTTTTTTTTATAGGCAAATGTTA GTTGTTAGTAATGTTAGTAAATTAGTCCTCCTCATGGTTTGAACCCTGGACCCTTCACCCTCTCGAACCCTTATGTTCCC TAGCTCTTACCACTTGAGCTAACTTTCGGGGACGAATAGGGATAACTGATATATGTGATATATGATGTGATGTAACACGA TGATGGATTGAGAGAAAAAATGGTATTTGTGGGTGTAGATACTGATTTTCATTCTCAACCGAGACCGTTTTGCTTAACGA GGGGAAAAGGGTTTAATGTAGGTTCATGGGATTGGGAAGTTAGTGTACTTTGGTAAAACACTAATTTATTCACAACTGAT TTTATTTCCATCTCCAAGCAGAGAGATAAAGAAGTGAATCAAAAGAAAAGGAATAAATTGGGATGCAAGAGAAAATAAAT GTGAATGTATCAAATTGTTTTGTATATATGTCATGGTAAGTGTATATTTATAATTTTGTATGGAAGATTTTTGAGGGGTA AGTGAGCAGGGGATAAATTTTTCAAATAAATATCTTTAAGAAAAGAAATAAATTCGTAAATTAGTATTTATTTTGATATG CTTATACATTTTTTTTGCATAATATTATATAATTCCATGAATTGGAAAGTAAAATGTTTACCCTTGTTAAACCTTCAATA CAAAAATGGGTTGATTGAGAGGACAGTTTTTGGATTTTGAATAAATACTTTCTACTTTGAGTACTATTGTTTAGAATGAA AGTTATAAAATGATAAATCAACATTATGCCCTAATCATTTATCTATTATGATAAACATTATATAATTATTTAATTTGAAA ATAGCAATTTTTTCTTTTAATTGTTTTCTTCCAGAACCCTTATTTTTTGGGAGGAGGTGTTTTGAAGCGAAAGAGAGGAA ATGGAAAAAATTTCATTATAAATTAATATTCTTAATTTAATAATTGTGTAGGATGAAAAATATAGAATGATAGTAGATTA TTAAAACTAATATTTTAATTCTCTATGTACTGTTATGAATATTATATTATTGTCTTAACCCCCTCCGAACAACCCTAAGG GCTAAGAGTATTGTTAGTCAAGAAGCATTTTATACATTATTACATGCTTCCATTTATTAAAAAAAAAAATAAGTATGGGA CGGAATTTAGTGCTTTCAATCAAATAAATGCTTTTGTTTTCATTAAGTATCTTTTTCTTATTTAAGTAGTATTCTAGGGA TAGGTTTTAGCATTCCCATTTCATTAAACATGCCAAGTTCGGCATGATGTGTCGCTAAAGTGAAATTATTTTTTATCGAA AATGACGATCTAAGCATTTTTTTGGTGTGGTTTGTTCAGTGCCCAGTATACGTAACAGGGAGTCAGTGTATTTCTTTTGT ATGTTGAAAACATATGCTAAACCATGGCCTTCTTCCACACTGGCTTAACCAGTGCTTTATCAACATTGAGAGGTTCTGCA TCTGCTATGAAAGCTAAAAGCTGCAGTAATTCCCCTTCATCAGTCACAGCATGATCTGGTGCTGTTTGAAATTGTGAATA TCTCTCTGGCCTATTTCTTTGTCTTTGAGGTCTTTGATCGTGTTCAATTTCTTCTGGCACAACTTCTGGAATCGGTTCAG GTGCAGGAATGTCTTCAGTTTCACTTGAATTATCAAACATGTCAATCTGAACCCTTCTCAAACTGGTTTCACCCTTTTTC CAGTCCCACTGCTCATCTTCAAGCAACTTATTTTCAGCACTAAACAGCTGAAAATAAGCATCCTTCATGATCACAGTGTA TCCCTTTTCCACAAGTTGCCCACAGCTCAATAAATTGCATTCATGTCAGGCACATAGAAAACATTCTCTGTTACTGCAGT TTTTCCATCCTTGGTGTGAATCACCACATTGTCTTTGCCTTCCACCTTCAAGGTTCTACCATCAGCAAACTTCACTTTCC TGATCCTTGAATCATCAAACTCTACCAGCCAATCTTTGTGGCTGGTCATGTGGTTGGAACACCCTGAATCAAGGTACCAA TTGTCAATTCCAGATTCAGAACTTGTGTAGTTGTGACCATGAGGGAAATTGGATCTTCATCTGAGTCCTCTCTTGCTGCA TAGGCTTCCTTCTCATCATTCTTCTGCCTTCCTTTTCCAGAACGACACTCATTATGAAATTCAATTTTATGCATGGTTTG CCCTTTTTGGCCTCGTTTGAGAAAACAAATCCCTTTCGTTGGACTAGGTTATCCTTCTTTTATTAGATTGATTTCTGAAT CCTTATTTGAGGTATCTAAATTTTGATCAGTCACACGATTCAGAATCGTATGGAACTGTATATGCTGACATACCTGTTCG TTGTCAAACTGGGAGTTTATGTAAACACATAAGAGCTAACTCATGCAAAAGTTAAATTAAAAGAACCCCGATAGTGATGA AAACATTAATAAAATTAAAAATATTCTTAACTAGCCAAATCAAACAATGACAAACTAATAATAACAAGTTAAAGTTATAC ACAAAATGACTAAACATAAGTTAACTGGAAAAAAATTAACACAAATTTCCAAGGTAAAAGACTGAAAAACTTTAAACAAG AGCAAGTTCATGATCTTCGAGTAAGAGTAAAAATATAACTATTATATGTTCCTCTGGATATCTGATTATCAATTCATAAT TTGAAATTAAGAAGAATTTATATGACATAAGATTCCAAATCATGGTTTGTAGACAATTTTAGAAATATTGCACCAGCTCA CTCTTGTGTGCAACAAGCAAAGGAATATTAGAGAATAGAAGGAAAGGGACAAAGCGAGAGGAATTTGCAAAGATTAAAAG TAGTACTGTATTGACTGTGTGATGAAATGTTGCCATTTTGGCAAAAAAATGGATATTCTCCCTTTTTTGCTGAACTCGTG AACTTGCGAGTTCACCCGAGTTGATTAGAAAACGAGTTTACATGCAATGTAAATCAATTTAGTCACGTAGGATTGCAAAC TCGTACAATTTTATGAGTTAAAACTAGAGTTTAACAAGGTTATGGAAGAATGTACTCTGTTGTTCTTTGTAATAGAACCT CAAAGTACACTTATTGACGCTTTTACACCTCTATTTTTCTCCGTTGCACTTTTCCACCGATACTTAGCCAAACAACTTTA TTGTAAAATATAAATTGAAGCAGGAATTTCCCTTCTATGGACTGCTATGTTAGCAAACATATGGATGTTTAGTCTTTCAT TTACTGTTCGGTGATTCTGTTGGCATTCTTTGTGGGGTGTCTTCTCAGGCTTTCTTAAATTGTTTTGTTGGGTACCGGGG CAGCTTGTGATGCAACTTAATGAAGTTCTGGTTTTTGATATTTGTGTCAATGGTTAAGATATAAATTGTATGCTTGACTA TGCTTGACTAGTAGAAAGAAAAACAGTTTGGAAGTATTCTTCAGTCATTTCTTGAAAATTTCTCTAATTGATGTCATGGA TGTGCAGGGCAAGTAATTAAAGGATGGGATGAAGGTATTAAAACCATGAAGAAAGGTGAAAATGCACTTTTCACCATACC TCCTGAGCTAGCTTATGGTGAAAGTGGTTCCCCTCCAACAATTCCTCCTAATGCAACACTCCAATTTGATGTTGAGCTTC TGTCTTGGACTAGTTTGAAGGATATAAGCAAGGATGGCGGGATATATAAGAAGATATTGACTGAGGGGGAGAAATGGGAG AACCCCAAGGATCTTGATGAAGTATTGGGTATATATACACTTCCCATATAGTTCTTTTTATTTGATTCCTCCTGCATTAG TTGGCTCAGTCTTAACTATTTATTGTACTCACTGGTAATGCAGTTAAGTATGAGGTTCATCTGGAAGATGGAAAGCTTGT TGCAAAGTCTGATGGAGTGGAATTCACTGTCAGAGAGGGTCAATGCCTATAAACTTTGTTAGTAAACATTTGTTATCTTC TTTGTCGGTGTCTTAAGTTAATTTTTAATTCATGATAGGTCATTATTGTCCTGCGTTGTCAAAGGCTGTTAAAACCATGA AGAAGGGAGAGAAAGTGATTTTGAAAGTAAAGCCACAATGTAAGTTGTCTACGGAATGCTTTGGTGATATGTAATGACTA ATATACTCTATGCTCTTTCCTTTATCCATTTCCTTGTTGGGTCATAGATGGATTTGGTGTGAAGGGGCAGCCAGCACATG GTGATGAAGGTGCAGTTCCACCAAATGCAACATTGCAGATTACGCTCGAGTTAGTCTCTTGGAAGACTGTGTCAGAAGTA ACTGGTGACAAGATCATAAAGAAGATCCTCAAGGATGGAGAAGGATTTGAGCGTCCAAATGAGGGGGCCATAGTGAAATG TGATTAATAATTTTGTGAATGACCATTATTGCTTTTATTTCTATGTTTAGTACATTTTTGTTGATAATTTCTTTATCATT TTGCATCTTCTAGTGAAACTAATTGGTAAGCTGCAAGATGGTACTGTCTTTTTGAAAAAGGGCCATGATGAAGAAGAGCT GTTTGAATTCAAGACAGATGAGGGTAAGTTGAAGCATGCCTATGTTTTACCCCATTCCTCGACATCCACTCTTATTTATT TATCTATCTGTTTTTATTTTTATTTTTGGGGGGTTGTGTATGTGAATGTCTGAAACAGAGCAAGTCATCGATGGTCTTGA TAGAGCTGTAATGACTATGAAGAAGAGTGAGGTAGCATTGTTGACTATTGCACCCGAGTATGCTTTTGGTATATCAGAGT CCCAGCAGGAGTTGGCTGTGATACCTCCTAATTCAACTGTGTATTATGAAGTTGAACTAGTGTCATTTGAGAAGGTTAGT TAAGAACTGAGTGATGAATTGAAGCTGTGCTTTAATAGTTAATGTTTTATTTTTGTTGGAAAGTATTTTCGAATTTGTTA TTAAAAAGACCTAGCATCTTGTTTGGGACTTACTTCTATCTCAACCAAGTCGTAAAAAAATTATTAGAATAAGATGACCA GCTTTCTTGGCAATTTGGCGCACCATGGAATAAGATTGATGTTCTAGAATTTGATTTGTGCTTTGTCGTTGACCCTTCCT TTCTGTATTTGACACTCTTATTCATTTTCTTATTCTGGATTTTGTATTTTGGAAGTCTCTCTTAGTAATTCTAATATCTT TCTTTCCCTCAGGAGAAGGAGTCCTGGGATCTGAACACTCAAGAGAAAATTGAAGCTGCTGGTAAGAAGAAAGAAGAAGG GAATGTGTTGTTTAAAGCTGGTAAATATGCTAGAGCTTCCAAAAGATATGATAAGGTATTTGGAGAAATTATACATTAGT TTACTGTTTTACATGTTGGTGCATCTTCTGAGACCTTGGTCACCGAAATTTAACTGTAGGCTGTGAAATACGTAGAGTAT GATACCTCGTTTAGTGAGGAGGAGAAAAAGCAGTCGAAGACCTTGAAGGTTGCCTGCAATCTAAACAATGCTGCTTGCAA GCTGAAGTTAAATGACTTTATAGAAGCGGAGAAATTGTGTACCAGGGTATTATACTGTCTCCATCTATAGAAATCACTAT GTTCTTTTACATTTAAAAAACTAATGTTTTTTCTTATGTGATTGATAGGTGTTAAACCTTGAGAGCACAAACGTGAAAGC CCTCTATAGAAGGGCCGAGGCATTGATGCAGTTAGCTGACTTGGATTTGGCAGAACTTGACATCAAGAAAGCTCTTGAGG TTGACCCTGACAACAGGTATATGCTCCGAATAAACTTCTCTTTTGGACCTTTTGGGTGCGATTCAAATACTATTTAGTGC ATGTTTGGATAAACTTCTACAATTGATTCTAAAATCAAAATCAATTACGGAGATAAGCTTTTGGGTGTTCAAAACTTCAA AATTGTTTGAGGAAACTGCTAA
CDS sequence (LotjaGi1g1v0592300.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAGAAGTGATGGACATACCCCCAATGGAGGCGATGAACGAGGACTTCGATCTCCCCGAAGACAAGGTGGGCGAGGA GAGAGAGATCGGCAACAGTGGTCTCAGGAAGAAGCTCCTCAAGGAAGGTCAAGGTTGGGAAACCCCTGAAGTCGGCGACG AAGTCCAAGTTCACTACACGGGGACCTTGCTTGACGGGTCGAAATTCGATTCAAGCCGCGACAGGGATGCTCCTTTCTCC TTCACGCTCGGACAGGGGCAAGTAATTAAAGGATGGGATGAAGGTATTAAAACCATGAAGAAAGGTGAAAATGCACTTTT CACCATACCTCCTGAGCTAGCTTATGGTGAAAGTGGTTCCCCTCCAACAATTCCTCCTAATGCAACACTCCAATTTGATG TTGAGCTTCTGTCTTGGACTAGTTTGAAGGATATAAGCAAGGATGGCGGGATATATAAGAAGATATTGACTGAGGGGGAG AAATGGGAGAACCCCAAGGATCTTGATGAAGTATTGGTTAAGTATGAGGTTCATCTGGAAGATGGAAAGCTTGTTGCAAA GTCTGATGGAGTGGAATTCACTGTCAGAGAGGGTCATTATTGTCCTGCGTTGTCAAAGGCTGTTAAAACCATGAAGAAGG GAGAGAAAGTGATTTTGAAAGTAAAGCCACAATATGGATTTGGTGTGAAGGGGCAGCCAGCACATGGTGATGAAGGTGCA GTTCCACCAAATGCAACATTGCAGATTACGCTCGAGTTAGTCTCTTGGAAGACTGTGTCAGAAGTAACTGGTGACAAGAT CATAAAGAAGATCCTCAAGGATGGAGAAGGATTTGAGCGTCCAAATGAGGGGGCCATAGTGAAATTGAAACTAATTGGTA AGCTGCAAGATGGTACTGTCTTTTTGAAAAAGGGCCATGATGAAGAAGAGCTGTTTGAATTCAAGACAGATGAGGAGCAA GTCATCGATGGTCTTGATAGAGCTGTAATGACTATGAAGAAGAGTGAGGTAGCATTGTTGACTATTGCACCCGAGTATGC TTTTGGTATATCAGAGTCCCAGCAGGAGTTGGCTGTGATACCTCCTAATTCAACTGTGTATTATGAAGTTGAACTAGTGT CATTTGAGAAGGAGAAGGAGTCCTGGGATCTGAACACTCAAGAGAAAATTGAAGCTGCTGGTAAGAAGAAAGAAGAAGGG AATGTGTTGTTTAAAGCTGGTAAATATGCTAGAGCTTCCAAAAGATATGATAAGGCTGTGAAATACGTAGAGTATGATAC CTCGTTTAGTGAGGAGGAGAAAAAGCAGTCGAAGACCTTGAAGGTTGCCTGCAATCTAAACAATGCTGCTTGCAAGCTGA AGTTAAATGACTTTATAGAAGCGGAGAAATTGTGTACCAGGGTGTTAAACCTTGAGAGCACAAACGTGAAAGCCCTCTAT AGAAGGGCCGAGGCATTGATGCAGTTAGCTGACTTGGATTTGGCAGAACTTGACATCAAGAAAGCTCTTGAGGTTGACCC TGACAACAGGCATGTTTGGATAAACTTCTACAATTGA
Protein sequence (LotjaGi1g1v0592300.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEEVMDIPPMEAMNEDFDLPEDKVGEEREIGNSGLRKKLLKEGQGWETPEVGDEVQVHYTGTLLDGSKFDSSRDRDAPFS FTLGQGQVIKGWDEGIKTMKKGENALFTIPPELAYGESGSPPTIPPNATLQFDVELLSWTSLKDISKDGGIYKKILTEGE KWENPKDLDEVLVKYEVHLEDGKLVAKSDGVEFTVREGHYCPALSKAVKTMKKGEKVILKVKPQYGFGVKGQPAHGDEGA VPPNATLQITLELVSWKTVSEVTGDKIIKKILKDGEGFERPNEGAIVKLKLIGKLQDGTVFLKKGHDEEELFEFKTDEEQ VIDGLDRAVMTMKKSEVALLTIAPEYAFGISESQQELAVIPPNSTVYYEVELVSFEKEKESWDLNTQEKIEAAGKKKEEG NVLFKAGKYARASKRYDKAVKYVEYDTSFSEEEKKQSKTLKVACNLNNAACKLKLNDFIEAEKLCTRVLNLESTNVKALY RRAEALMQLADLDLAELDIKKALEVDPDNRHVWINFYN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | 12 | 144 | 133 | 2.55E-47 | – | |
| PANTHER | 13 | 515 | 503 | 2.9E-299 | – | |
| PANTHER | 13 | 515 | 503 | 2.9E-299 | – | |
| Gene3D | 25 | 140 | 116 | 3.6E-54 | – | |
| Pfam | 47 | 137 | 91 | 4.9E-35 | ||
| ProSiteProfiles | 52 | 140 | 89 | 33.584 | ||
| Gene3D | 141 | 256 | 116 | 2.2E-34 | – | |
| SUPERFAMILY | 144 | 259 | 116 | 1.63E-23 | – | |
| Pfam | 164 | 253 | 90 | 2.4E-15 | ||
| ProSiteProfiles | 168 | 257 | 90 | 18.122 | ||
| Gene3D | 257 | 385 | 129 | 3.7E-32 | – | |
| SUPERFAMILY | 263 | 393 | 131 | 1.96E-28 | – | |
| Pfam | 280 | 373 | 94 | 2.4E-19 | ||
| ProSiteProfiles | 284 | 376 | 93 | 20.325 | ||
| SUPERFAMILY | 382 | 516 | 135 | 4.85E-27 | ||
| Gene3D | 386 | 516 | 131 | 5.3E-44 | ||
| SMART | 393 | 426 | 34 | 31.0 | ||
| ProSiteProfiles | 393 | 426 | 34 | 6.844 | ||
| ProSiteProfiles | 393 | 426 | 34 | 7.037 | ||
| ProSiteProfiles | 442 | 509 | 68 | 13.134 | ||
| SMART | 442 | 475 | 34 | 7.2 | ||
| SMART | 476 | 509 | 34 | 1.0E-5 | ||
| ProSiteProfiles | 476 | 509 | 34 | 9.47 | ||
| Pfam | 477 | 509 | 33 | 6.6E-4 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Peptidyl-prolyl cis-trans isomerase activity | Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0). | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0592300.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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