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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0608400 |
| Transcript ID | LotjaGi1g1v0608400.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Myb transcription factor; TAIR: AT3G27810.1 myb domain protein 21; Swiss-Prot: sp|P81391|MYB05_ANTMA Myb-related protein 305; TrEMBL-Plants: tr|Q0PJJ6|Q0PJJ6_SOYBN MYB transcription factor MYB181; Found in the gene: LotjaGi1g1v0608400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:115282684..115290700) extracted from Lotus japonicus Gifu genome v1.2.
TCCTTTCATGTATTATTGTACAAGAATCATATTTTGTTTACATGAGGTGCGGTTCATACATACTTAAGAGATGCTTACAG ATCTGAAAAAACATTTATCTCCAGTTGTATATGATAGAGCTGATGGATTCAAAGTGCTCTCAATCCTAATCTCTATGACT TGATCAACCAGTAGAGTAGACGTTGAAGCCACATGATCATAGTCACTTTCTACTTTTCTCTCTAAGGCTTAGAACTTGTA TCTTTTCTTGTGAGTCTTTTTTTTGTTTTTCTTTTATCACTCTTACTTTTTATAGCAAGGCATAGACAATCTATCTATTT CAATTTATCCTTAGTTTTCTTCTACTCCACTCTTTCTCTTCTCTTGAGGTCTTCAAATACATAGTCTTGCTTAAGTAGAA CCTCCGCTTCCAAGAGCTGTATGAATTGACTACATGCTTCTTGTATTGATGAACAATTCCAACATGTGTAAATGCAAGTA GGAAATGTACTTCATGATCATTTGAGTATACTCCCCCTCAACTTGTGCACGGTGTGTCGTCTTTCATTGTTTCAATCTTC TTTCTTTCATCTTCTCTTCTTCACTCTGTTCCACACACAATCTTTTTCATTTTCTCTTGATCTCTATCTTCTTCTCTACC GGTCTCTCTTTTACTATATCATTCACAGATCTCAAGCACACTTAGATCTTTTTTTCTCATCATCATTTCATTTATACTTA GTCTTCATCATATGACTGTTGCAAGGCTTGTAACTATCTAGGTAGTTTGTAGATGGTCTTCTTGTAGATGTTAGAGAGTG GGCAAGAGTCGTTCTTACCAAAAGTACTATAAGAACAATTGTTCTAGCATGTGTCAGATAGATGAAGACTCGGTAGTACA AAGGTAAGCTTTCAACATGTCTTCATTGTCCATGATAGCTGCGAATTGTACTTTTGTTACTTATTTTCAGCCATGAGTGT TCAGAACTTTGTTGACCCTAGAAAGCTTTCGTGACCGGTTGCTAAGTGCCATGCATAACTTTCTCCTTTTGGCAAAAGGC ATGCTTCATAGCTTTTTGATGACTTGATAGCTTTGTACTTTTGCTTCTGATTATTGTACTCTTGTCTGACTAGCTAGGCA AGTCACGTGTGAACAAATTTAGCTCTTTATTTCACTTTCTTGAGTGGACGATTTTTCTTTCTTTTTCTTAGTCCATTTTT CATAAGCGTTATGGTCAGATGATTGAGTTCTTGAACATTGTATGTAGCTGGAAGACAATGAAGCTCTAGACGATACAAGC TATGGATACTGTCTTCTTGGACGATATAGGTCAGACTATGCTTGTGTAGACGATACTAGAAGATGAAGTTAATGCTTGAT GGATATAACACTTGGTTTTGTGTACTTCAACTGACTTTTCTTTAGGGTTTCATACTCCTTGCTTTGCATTGGCCTTTCTC ATTCTTCATGTTAATTTTCAGTAGTAGCTTTGTCGTTTTGTCATCATTAAAACATTTCTTCTCCTTTAGTGATAACTCAT TTGAACCTTACAGATATATGATGTGATAAGAAAAGAAGAGAAATATATATAAATAGAAATTAACTAGAAATTAAATTGAA AGAAATTGTAAAAACTATCCTATATTATTATTAGATCAACCGAATCCAATTTTTGACAGCCGCTAAATGTGAAGAGTGAA AAAAGGACGTTAAATACACCAATTTTGTGGTGGTTTGTATGCTCTCAAAATGTTAGAATAGTGTACTTATTTTTTAAGAT ACTCTATAAATTGTGACGATTTTTGCGGTAAAAAAAAAAATCACAACCGTCGGTGTGAATGAGTCGAAACTCTATTGTTG TATTGCATCGACACCTAGTGCTCAGATTGCATGTGCGCAACTTAAGGGCCAGATATAAGATACTATTCTTGAAACTCTAG TTTACCTGGAGACGCACATAGTCATGCATGCATGATAATATGACACACATAGTTAGGTACGTAAAAACCTCTTTTATCTA GTAGAAAACTTTGATTAGAATTAATAAATTGTCTTAGTGTTCACTCTATTTAAACCCTCCAACCCCATAATTAACATGTC TAGTATCTCTCTTCACCCACTTTTCTTTCTCTCTCTATATAAAAACAATGGACAAGAAACTGTGCAACTCTTCTCAAGAT CCGGAAGTGAGAAAGGGGCCATGGACAATGGAAGAAGACTTGATCCTCATCAACTATATAGCAAACCATGGTGAAGGTGT CTGGAACTCCTTGGCTAAAGCTGCTGGTAAAAACAAATAAAAAAAAACAAAAAGTTTATTTCTTATTAAGAATTATTACA TGTTACATCATTGAGTGCTCTCTTGTTTTTTTAATTCTTGAAGATCTTCTTCTTTCTTTTCTTTTCTTCATCCTCCTAAA ACCCTAGGGGTGTGAGAGAATGATTCATCATCATGATGGTTTCTCAGGTCTTAAACGTACCGGAAAGAGTTGCCGGCTCC GGTGGCTAAACTATCTCCGTCCGGATGTTAGAAGAGGGAATATTACACCGGAGGAACAGCTTCTCATCATGGAACTTCAT GCAAAGTGGGGAAACAGGTAAACTGATGAAAACTGATTTAGTTATAAAAAAATGCATGGTGCATGTGTTCTACACAAAGA GATCATTTTGTTTTTTTTACTAAAACAATGATATTTCTACAAAGAAAAGAAAAATTTAAATGTCAACCGTCTCTATAAAC GAAAGATATATGAAAGAAGTTCTTTGCTCTCACTTAGTTTGAGAAGGAGAGAATTCTAACCATGAGAAAAGATGCCACAC ATGGGACTTGTAGACCTTGTGGCAACAAATGTTCCTTGGACTAAATCTATTTATTCCATCCATATGGAAGAGATGGAGTA TATTTCTTTAAAGGGTGCATGTTATACACCTCTTGACTCTTGTTTCTGTTGCATTCGACCTATCTCTCTCACTTACCTAC TTATAAAATAATGAAGTGGGAATTATAAGTAGTTTTGTTGGAAGTGAGGTCAGATCTAATAGAGGGAAGATCAATACAAT AATGATAAATCTCATAAACTCAATGAATTAATTAGTTACTGGACATGAATATTAAACATCCTTAATTTTTACTCCTTTAA CATATATTGTTTGCATAGATGCATCTCCTAAATTTCTCAACGAATTAATTTTTATTTTTATTTTGATCAAATTTGTATTT TAATTTTTTACTTTTAAGATCTATTCTCTTGATCTGAAAGTTGGAGGTTGGCTATGAGAGAGATTTAAACTTTTACTATA TATTTTTATGAATTATATTGTATGCATTAGAGTTTTTCAGAGCAGTAAAAGTTAGAAACTCCAGAATCGATCTCAAATTT AGTCCTTACACAATTTTCGGAAGGCAAATGAAACTACTAACTAAAAGGAAGAAAGGCATGATGGAAAATATGCCATCCGG AACTGGACCCAATAGAGATATATAAATAGAAGAGATATAAATGAGAGTTGATGAATTGAGTAATAGAAAATAAAATTGGC CAAAAGGAAATGAAAGAGAAAATTAATGTCAATGAATCACAACTCAAACATGATTATAGACAACAATAAAAGATTTATCT TTTATTTTGAAAAAAATGCAGATTTATCTTTCTTAAACAAGAAGTAATATAAAGGGTAAATTGCACTGACCTTCCCTGAG ATTTATCATTATTGTACTGATCTCTCCTCTATTATTTAATTAGACATTAATCAACCTTATTTTATTGAGAACATTGCACT CTTGAGGTTTATTATTGCACTGACATCTCTTAAGATTTAAAATATTTTTGTTTGAACAAACAAGATAATCATTTATTAAA AGAAAGTCCGTTACAAAAGGGGAAGAATTACGTTAAAGCCATCACTCAACGCCCCCGTATTATTTAAACTGATATGTAAA AGAGGGAAGATTAATGCATTTTGCAAACTAAATGAGAGGTCGTTAGTGCAATAATGTTAAACCTCAGGAGAGGTGATTGT AGTTTCCCTAAAATAAATTATTAGAAAGGCTGTTTTTTAAATTTACTACTATATATAAATATTATTTTTCGAAAGCAGAA AAATTTACTGATCAAATTTACTAGAATATATAATTATAAAACTATTTTAACTTTATAAATGCTATTTTATAATTGGCTAT ATATAATTATATATACCTCCAAGGAGCCCTTTGATAGAAAACCGAATAAGTTGTGGACTAGAGGGGATTCCATTTTAGGG TGCAGCAATAGAAGTAGGAATAACCTTAATTATGGCTTTTTAGTTTCAGACGAATGAGAAATTTCAGAGTTTGGGTGAAG TAGACCCAAACCATCCACTTTGGGCTCTTGACAAGGGCAGGTGTCCTTGTAAATCTTTGATAGACTTACATTTGATTATA GCGCATAAACAAACTAGCTAGCTAGTTACATCGATCCAAAGTACCTCAATATCCAATTTTCTTTCTGCAAAACAAGCCAA ACCACAAACAAGAAAGTATGGATTAATTGTCTAAGGAAAACCAAAAAAATAGGATACAAAGTAGTTTGTAATTAAAAAGT TTGTTATGAGATATAGAAGTTTATGGATTTGTCTACTGGACCGAGAAAATATGAGTAAAAATTACTTTTTTTTACTAATT AATTTTAGCACATAAAAACTTTATTGTAAATATTACGTATTGCATATTAGTTGTAAAAACATGGTTCATAGAAAGACCAT ATTTTAAGATGTTCCACCATACCGCCCAAAATTATATTTAGGACTCTACTTATTTTGTTTGTGCATGTACCTGAGCTGAG CTGAGACAACCCACGAAAGACAAATGAAATTTTTAATTCAAACTGATCTCACAATTATCACATTTTTTAATTATAAAATA ACTATATTTTAAGACTAATAGGTCAAGAAAGTAAATTAAATATAGTTCACATTTTCTAGATGGAAATAGGTTGGGTCAAG GTCAACTTCCAAACACTTCTTTTTTGAAAAGAACTTCCAAACACTTGAGTTTCATTTACCTGAGTTTTTAACATGGTGTA AGTTATATAATTTTCAAGCTACTTCTTTTCACTAAGGTATCCTGTAGTTAAGAGGGTATAGACTAATTCTCTCAAGATTT TAAGATCACATTCAATGAGTAGACATCTTCTAACTAATCATTCTCTTAACACACTATTCAAATATAAAACTATCAACTAG ATTATATATATATATATATATATATATATATATATATATATATATATAGCCAAGAAAAATAACATTAACTAGAAGCACAA GGGGAGGATTAAGTCAGCATGTTAGGCCGAAAACACTTTCCAAATGGTATATGTAAGAACTTTTTAGTTTTTTGGTGCAT TTATAGCAAGTTAGAAACGCCCACACCATGATGATGCTAACTTTCTCGTAGGGTTTTTTTTTTTTTTTTGAATTCACAAG ACTCATACCTAAAATCTTACTTAAAGAGAATCAGATATGTATCATATAAACCAACCATGCACCTGTTGCTAGACTTTTTA ATTAAACAAGCTTTTAGAAAAACTTTAATCTTATTTATTTTTATTTAAGTCCAACACGTCAGTAAGATATGAGCTACCTC TATAAGCCCAATTGAGGCCCGTTCTAGCGGTCTGACCTATTTCTACTCAGAGACTTTCCTTTGTTTGTTAAAAGCATATA TAGAAATTAAAATGCAAGAAGGAAATGGACATAAAATTTTGCTACAAAATATGAAATGGGATAGCCGAAATGGAAGTGTA TTTTATGTAGACGACAAAAATGAAAAGGAATACATGGATGGAAAGAGAGTGAGAGAGAGAGAGAGAGAGAGAGCATAGGA AATATTTGAAGGGAAACCATACTCTGCCTGCGTGAGGCATGCTTTGAGAAATCTGATTTTTTCTCATCTTGGAGACTGGA GAGCCTGCGCTGCTAAGCAAAGGCATATCTCCATAATATACCAATGGAAATTCAGCATCTTACGTACCTCAACAATGCTG GTTTTTATAAGTGAGTTCAATATAACTTCACATTGAATCTCAGCCGTCAAACATGATCTCTATAGGCGGTTTTAATATTT AAATTTCAGATTCATGCTTCGTTTTCCAAGAAACTACAATAATACCAATCGCTAGTTGGTTCTTGTCCATGTCTGAGATT CCCTTTTGATAAGTTGTGGAGTTCAAGTCTTGTGAATGGTCGAAACTAGAGTTAGTCTATTCTTCAATTCAGGTCTTGAG AATGGAAAAAGTTGACGAGTAGAGCTAGATTTATTGTGATATGAACGCCCTCACTTGAGCTAATCCTATTATGATATGGA TTTTACCGACTCGAACATAATAGCTTGTTGTGGATGACACTTGTGGTGGAAAAGTAAAAGTAAAAGTAATACTACACCTA TGTTTTACCTCACTTTCTCTCATGCACACGTGTGTACACTCTTTCCACCAAAATTTCATTAACAGAGTGTTTTCTGCATA TATATTATGGTTAAGAGGACTTCAAATCTAGTTATGCTGACTCTTTTTTTTTTCCTTTCTCATATCAGTAGTCTGCTCTA ATTATCATAAACAGAACTAAAACTTGTTTATTTTGTTTGATCATACCCCATTTATTCCTTGTTTTTTAAAGTTTAGGTTT AAAAGTTCTATAAGTTTACCTTGAGGCTCCTATTCTACTTGCACTCTAGAGAGAAAGAAAAGAAAAAAAGAGAAATTAGA GATATGATAGATGATACATGATGAGAAAAGAAAAGAGAGATAGGAAGAAAAAGTGAGTGAAAATGAGATGGAAGAGAAAG ATGAGTGTGAATGAATCAAAACGCTTAAAAGTTTCTTTACAGCTAAACAAAACCAGCACAATACCATTCAGTTATCTGTC ATTGTTGTCTTTTTACAAATTATTCATCAACAAAGTCCACTTTCTCTTCCATATCCCAATTCCATCATTTTTACTTGACA TCTCAAATTTCTTTTCTGATCACATCACTCGTCATATCTTTTGTTTTGGTTCTCACTCTGGGTGGGAGTGAAAATGGGAA GGATGATGTCGACACAATGTTAGTGATTATTTATTCACCAATGCACACAGGTGGTCCAAAATTGCAAAGCACCTACCTGG AAGAACAGACAATGAGATAAAGAACTTCTGGAGGACTAGGATCCAGAAGCAAATGAAGCAATCTGAGAATTTATTCCAGC AACAACAGGGTTCTTCTGATCAAATAAATGATCCTCAAGCAAGCACTAGCCAACTTTCCACAATCTCTGAGCCTATGGAG CCCTATTCTTCATCCTCTTACCAACAACTATTGGAGCCATTTTCAGCTCCTCAGTTCCCCACCACAATCCCTGATAATCA GAATCAGACCAGTACTAGTAGTACTAATGACAACAACAACTATTGGAGCATGGAGGATTTCTGGTCAATGCAATTACTTA ATGGTGATTAAATATATAAAAATAATATAATCTATATAATTAACCTAAGTGGTTAAGTTCCATGAAGCTGGAGTACTGTC TCTTGCGGAATTAAAAAAAAACATTATTAGGCTTGTCTATATAAGTAGTAGTTTGATGTTTGGTGACTTGCGTGCCATTA AGAGCTAAATGAGTTATGTGCTGTAATATATGAGCTTAATCGAACTTTATCTGCATGTGCTTGCATGTGGAGTGTACTAA GAGATATGATTGAGAACCACAAACCTGGAACTTAATATGTATTCCCTGTGGCAGGCTTGATTATTTATTAGATTGTTTTT TTATTTTATTTGTCAATATTTGGTAAGTTGTCTTTGTACCAAGCTCAAGGTAACTTCAAATCAAAATACTTTTCTTCTTT GTTAGGAATAGTTCCTAGCTACAAGAATGACATATCAGTAAGCCTTTTCTCTTTTATTATATTGGCTCATTTTATGAGGT GCTATTATTTTAGCACTTATGATAGACACTCAAACAGTAGACGCCTACACCCGATTTTATTGTTTACTTTTCTTCTTATA CTATATCATCTCATATC
CDS sequence (LotjaGi1g1v0608400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACAAGAAACTGTGCAACTCTTCTCAAGATCCGGAAGTGAGAAAGGGGCCATGGACAATGGAAGAAGACTTGATCCT CATCAACTATATAGCAAACCATGGTGAAGGTGTCTGGAACTCCTTGGCTAAAGCTGCTGGTCTTAAACGTACCGGAAAGA GTTGCCGGCTCCGGTGGCTAAACTATCTCCGTCCGGATGTTAGAAGAGGGAATATTACACCGGAGGAACAGCTTCTCATC ATGGAACTTCATGCAAAGTGGGGAAACAGGTGGTCCAAAATTGCAAAGCACCTACCTGGAAGAACAGACAATGAGATAAA GAACTTCTGGAGGACTAGGATCCAGAAGCAAATGAAGCAATCTGAGAATTTATTCCAGCAACAACAGGGTTCTTCTGATC AAATAAATGATCCTCAAGCAAGCACTAGCCAACTTTCCACAATCTCTGAGCCTATGGAGCCCTATTCTTCATCCTCTTAC CAACAACTATTGGAGCCATTTTCAGCTCCTCAGTTCCCCACCACAATCCCTGATAATCAGAATCAGACCAGTACTAGTAG TACTAATGACAACAACAACTATTGGAGCATGGAGGATTTCTGGTCAATGCAATTACTTAATGGTGATTAA
Protein sequence (LotjaGi1g1v0608400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDKKLCNSSQDPEVRKGPWTMEEDLILINYIANHGEGVWNSLAKAAGLKRTGKSCRLRWLNYLRPDVRRGNITPEEQLLI MELHAKWGNRWSKIAKHLPGRTDNEIKNFWRTRIQKQMKQSENLFQQQQGSSDQINDPQASTSQLSTISEPMEPYSSSSY QQLLEPFSAPQFPTTIPDNQNQTSTSSTNDNNNYWSMEDFWSMQLLNGD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 204 | 204 | 1.2E-86 | – | |
| PANTHER | 1 | 204 | 204 | 1.2E-86 | – | |
| ProSiteProfiles | 11 | 63 | 53 | 17.274 | ||
| Gene3D | 13 | 69 | 57 | 2.0E-18 | – | |
| SUPERFAMILY | 13 | 110 | 98 | 2.17E-30 | ||
| SMART | 15 | 65 | 51 | 7.2E-13 | ||
| Pfam | 16 | 63 | 48 | 4.9E-15 | ||
| CDD | 18 | 63 | 46 | 1.86309E-10 | ||
| ProSiteProfiles | 64 | 118 | 55 | 25.887 | ||
| SMART | 68 | 116 | 49 | 3.4E-15 | ||
| Pfam | 69 | 112 | 44 | 1.1E-15 | ||
| CDD | 73 | 112 | 40 | 2.11104E-12 | ||
| Gene3D | 73 | 143 | 71 | 9.1E-20 | – | |
| MobiDBLite | 120 | 193 | 74 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). |
Expression pattern of LotjaGi1g1v0608400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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