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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • PTHR45675
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 20 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 0.017s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi1g1v0608400.1
n.a. Myb transcription factor; TAIR: AT3G27810.1 myb domain protein 21; Swiss-Prot: sp|P81391|MYB05_ANTMA Myb-related protein 305; TrEMBL-Plants: tr|Q0PJJ6|Q0PJJ6_SOYBN MYB transcription factor MYB181; Found in the gene: LotjaGi1g1v0608400 LjG1.1_chr1 115282684 115290700 +
1 domain prediction
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LotjaGi1g1v0608400.2
n.a. Myb transcription factor; TAIR: AT5G40350.1 myb domain protein 24; Swiss-Prot: sp|P81391|MYB05_ANTMA Myb-related protein 305; TrEMBL-Plants: tr|A0A072U635|A0A072U635_MEDTR Myb transcription factor; Found in the gene: LotjaGi1g1v0608400 LjG1.1_chr1 115284811 115285264 +
1 domain prediction
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LotjaGi2g1v0244500.1
n.a. Myb transcription factor; TAIR: AT3G27810.1 myb domain protein 21; Swiss-Prot: sp|P81391|MYB05_ANTMA Myb-related protein 305; TrEMBL-Plants: tr|Q0PJJ6|Q0PJJ6_SOYBN MYB transcription factor MYB181; Found in the gene: LotjaGi2g1v0244500 LjG1.1_chr2 70882518 70892020 +
1 domain prediction
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LotjaGi2g1v0244500.2
n.a. Myb transcription factor; TAIR: AT5G40350.1 myb domain protein 24; Swiss-Prot: sp|P81391|MYB05_ANTMA Myb-related protein 305; TrEMBL-Plants: tr|A0A072U635|A0A072U635_MEDTR Myb transcription factor; Found in the gene: LotjaGi2g1v0244500 LjG1.1_chr2 70883118 70883496 +
1 domain prediction
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LotjaGi2g1v0369100.1
n.a. Myb transcription factor; TAIR: AT3G46130.2 myb domain protein 48; Swiss-Prot: sp|Q9LX82|MYB48_ARATH Transcription factor MYB48; TrEMBL-Plants: tr|I3RSY5|I3RSY5_LOTJA R2R3MYB transcription factor; Found in the gene: LotjaGi2g1v0369100 LjG1.1_chr2 86650279 86652386 -
1 domain prediction
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LotjaGi2g1v0369100.2
n.a. Myb transcription factor; TAIR: AT3G46130.3 myb domain protein 48; Swiss-Prot: sp|Q9LX82|MYB48_ARATH Transcription factor MYB48; TrEMBL-Plants: tr|I3RSY5|I3RSY5_LOTJA R2R3MYB transcription factor; Found in the gene: LotjaGi2g1v0369100 LjG1.1_chr2 86650279 86652386 -
1 domain prediction
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LotjaGi2g1v0369100.3
n.a. Myb transcription factor; TAIR: AT5G59780.3 myb domain protein 59; Swiss-Prot: sp|Q4JL84|MYB59_ARATH Transcription factor MYB59; TrEMBL-Plants: tr|G7JTP3|G7JTP3_MEDTR Myb transcription factor; Found in the gene: LotjaGi2g1v0369100 LjG1.1_chr2 86650279 86652386 -
1 domain prediction
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LotjaGi2g1v0369100.4
n.a. Myb transcription factor; TAIR: AT3G46130.1 myb domain protein 48; Swiss-Prot: sp|Q9LX82|MYB48_ARATH Transcription factor MYB48; TrEMBL-Plants: tr|I3RSY5|I3RSY5_LOTJA R2R3MYB transcription factor; Found in the gene: LotjaGi2g1v0369100 LjG1.1_chr2 86650476 86652213 -
1 domain prediction
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LotjaGi3g1v0280300.1
n.a. Myb transcription factor; TAIR: AT3G46130.1 myb domain protein 48; Swiss-Prot: sp|Q9LX82|MYB48_ARATH Transcription factor MYB48; TrEMBL-Plants: tr|I3TAJ0|I3TAJ0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0280300 LjG1.1_chr3 56026405 56029912 -
1 domain prediction
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LotjaGi3g1v0280300.2
n.a. Myb transcription factor; TAIR: AT3G46130.1 myb domain protein 48; Swiss-Prot: sp|Q9LX82|MYB48_ARATH Transcription factor MYB48; TrEMBL-Plants: tr|I3RSY2|I3RSY2_LOTJA R2R3MYB transcription factor; Found in the gene: LotjaGi3g1v0280300 LjG1.1_chr3 56026644 56029337 -
1 domain prediction
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LotjaGi4g1v0334500.1
n.a. Myb transcription factor; TAIR: AT5G49620.1 myb domain protein 78; Swiss-Prot: sp|Q9FGY3|MYB78_ARATH Transcription factor MYB78; TrEMBL-Plants: tr|A0A151SCT9|A0A151SCT9_CAJCA Myb-related protein 305 family; Found in the gene: LotjaGi4g1v0334500 LjG1.1_chr4 71365847 71368246 -
1 domain prediction
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LotjaGi4g1v0453400.1
n.a. Myb transcription factor; TAIR: AT1G25340.1 myb domain protein 116; Swiss-Prot: sp|Q9C9G7|MYB62_ARATH Transcription factor MYB62; TrEMBL-Plants: tr|A0A0B2Q5K5|A0A0B2Q5K5_GLYSO Transcription factor MYB21; Found in the gene: LotjaGi4g1v0453400 LjG1.1_chr4 82538141 82540727 +
1 domain prediction
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LotjaGi5g1v0162500.1
n.a. Myb transcription factor; TAIR: AT3G24310.1 myb domain protein 305; Swiss-Prot: sp|P81391|MYB05_ANTMA Myb-related protein 305; TrEMBL-Plants: tr|A0A0M3Q0K7|A0A0M3Q0K7_LABPU R2R3-MYB factor; Found in the gene: LotjaGi5g1v0162500 LjG1.1_chr5 41663322 41665203 -
1 domain prediction
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LotjaGi5g1v0241700.1
n.a. Myb transcription factor; TAIR: AT1G48000.1 myb domain protein 112; Swiss-Prot: sp|Q9LDE1|MY108_ARATH Transcription factor MYB108; TrEMBL-Plants: tr|I3RSY6|I3RSY6_LOTJA R2R3MYB transcription factor; Found in the gene: LotjaGi5g1v0241700 LjG1.1_chr5 55002583 55004377 +
1 domain prediction
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LotjaGi5g1v0241700.2
n.a. Myb transcription factor; TAIR: AT1G48000.1 myb domain protein 112; Swiss-Prot: sp|Q9LDE1|MY108_ARATH Transcription factor MYB108; TrEMBL-Plants: tr|I3RSY6|I3RSY6_LOTJA R2R3MYB transcription factor; Found in the gene: LotjaGi5g1v0241700 LjG1.1_chr5 55002754 55004472 +
1 domain prediction
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LotjaGi5g1v0338500.1
n.a. Myb transcription factor; TAIR: AT1G68320.1 myb domain protein 62; Swiss-Prot: sp|Q9C9G7|MYB62_ARATH Transcription factor MYB62; TrEMBL-Plants: tr|G7ICA5|G7ICA5_MEDTR Myb transcription factor; Found in the gene: LotjaGi5g1v0338500 LjG1.1_chr5 65566161 65568292 -
1 domain prediction
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LotjaGi5g1v0338900.1
n.a. Myb transcription factor; TAIR: AT1G68320.1 myb domain protein 62; Swiss-Prot: sp|Q9C9G7|MYB62_ARATH Transcription factor MYB62; TrEMBL-Plants: tr|V7BAR9|V7BAR9_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0338900 LjG1.1_chr5 65602941 65604942 -
1 domain prediction
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LotjaGi6g1v0009600.1
n.a. Myb transcription factor; TAIR: AT4G13480.1 myb domain protein 79; Swiss-Prot: sp|P81391|MYB05_ANTMA Myb-related protein 305; TrEMBL-Plants: tr|A0A0R0HSY1|A0A0R0HSY1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0009600 LjG1.1_chr6 1789621 1791424 -
1 domain prediction
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LotjaGi6g1v0009600.2
n.a. Myb transcription factor; TAIR: AT4G13480.1 myb domain protein 79; Swiss-Prot: sp|Q4JL84|MYB59_ARATH Transcription factor MYB59; TrEMBL-Plants: tr|A0A0R0HSY1|A0A0R0HSY1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0009600 LjG1.1_chr6 1790140 1791292 -
1 domain prediction
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LotjaGi6g1v0262200.1
n.a. Myb transcription factor; TAIR: AT5G49620.1 myb domain protein 78; Swiss-Prot: sp|Q9FGY3|MYB78_ARATH Transcription factor MYB78; TrEMBL-Plants: tr|A0A151QND2|A0A151QND2_CAJCA Myb-related protein 305 family; Found in the gene: LotjaGi6g1v0262200 LjG1.1_chr6 57490344 57492808 -
1 domain prediction
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