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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0622900 |
| Transcript ID | LotjaGi1g1v0622900.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Uridine kinase; TAIR: AT5G40870.1 uridine kinase/uracil phosphoribosyltransferase 1; Swiss-Prot: sp|Q9FKS0|UKL1_ARATH Uridine kinase-like protein 1, chloroplastic; TrEMBL-Plants: tr|I1MLJ3|I1MLJ3_SOYBN Uridine kinase; Found in the gene: LotjaGi1g1v0622900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:117006876..117012928) extracted from Lotus japonicus Gifu genome v1.2.
GTCATCACTTAACACAATCCTATTTGATTCAGTTGCGATAAAGTTCAAATGACTCTTTAAAATGCATCTTATAAGAACGA ACTCTCGACTTAAATGATTTAAAAAATTATTTTTAATAAACATTAAGAACAATTTTATGAGCTTAAATAATTTTGAATTT TATTTGATTTAATTCCATCTTTGGGTTGATATCCAATCAAAGCACTGATTCATCAACTATTACCACTCTCACCCTCCGCC GCAGACAGAGCGAGAGACAATGCCGGAGGAAACAACGTCGATCGACTACGTCATGGAGGCAGCTTCCGGCCCCCACTTCT CCGGCCTCCGTTTCGACGGCCGTTCACCGTCGTCTCCGTCAACCTCAACCACTCCTCCCGCCGATTCAACCCTCGATTCC CTTCTTCCCAATCCACCCTTCGTCATTGGTATCTCCACTTTCTTCCCCCTTTCTCTTTCTCTCTCTCCGAAATTTGAATG ATTGATCGTGTGTGTGATGGTGCAGGTGTTTCCGGTGGTACCGCTTCTGGAAAAACCACCGTCTGCGACATGATCATTCA GCAGCTTCACGACCACCGCGTCGTGCTCGTCAATCAGGACTCGTTTTATCGCGGGTTGAAGCCTGAAGAGCTTGAACGCG TTCACGAGTACAATTTCGATCATCCTGGTAAATTATTCACACCGTTTTTCAAATTTGTCAGGTTTCTGAGTGAGTGTTGA GTTGGTTCGTTTTGTTGTTGTTGTTGTATTGTAGATGCTTTTGACACTGAGCAGCTGTTAGAGTGTATGAGGAAACTCAT CAGTGGCCAGATTGTTCAAGTTCCCATTTACGATTTTAAGAAGCATCAACGCTCTTCTGATAGTTTTCGTCAGGTGGGTA CTACTGCTTGTTGTAAAGTTTGTTTGTTTTTTACTTTCAAATACAGTGGTTTTAACCAAATTGACATTTGTCTCGGATTT ACTAGTTTGTTAAATTGACATTTGTAGTAGAAGGGTGTGTTTCTTTTTATGTACTAAGAAATATTGTTGGATTGGAAGAA AAGGTATAAACAAGGGTAAAACTATATGTGAAGTTCTTAAAACTTAAAATAGGCAACAACCATGTAGAGCTAAAGGTAGT AGTAGTAATGCTGAAACTGGTGCAACCCTTTGCATTGTGTATATACCTTTGCCCTATTACTAATAAGGAGGAGGTCAACA GGTTTTTTTGTTTTATTTAATGAAAGGGAAGCAAAGAAAGGATATATTTAGTGAAAAATAGGAGCAGGGGACTTTCTTCC CAAGACCTTTTACTGAACCCCAACTAGATCCTTGAGAATGTCGCATGTGGAGAAAAAAATTCATTCTTATTACTTTTAAG GCTTTGGAAACTTTTAATGAATAGTTCTGAACGGAGGACAAAGCCAAGCTCCACCGTGCATGATGAAAATCCTTTTCTAC ATGGAAATGACTGATGGGTAGGGATGAAACCAAGTGGTTCCAAAATAGGCGGCCGCTCTCAAAGAGATTTTTTTTTTCTT AATAGAATAGTATGCTAATGTTGTATTTCCCCCCCTTAAAAATTTTATACTATATCTTTCGATTAGACATTGTTAATTTT GCTTAATGTGTTAAATTTCCGGCCCCTTAGGCCTTACCTATTTTTTTTTGGTTCCGTCCCTCCTGATGAGCAGTTCAGGA GCGTTTGCACAAATGTTTCCTTCTTAGAATTACTCATTACATGTGTACTAGAAGACTAAAATTAATTAGTTCTACAACCT GAGGAGATCTCTGTTGTATTTAATTGACTGTGTCACTATGACATGTATCAGACGGTTGCTCTACCATTTAACTTCTTTCA TTTTTCCTACCTGATGTTTTTTTCTGGTTCTTTGCTTAATATTAATTTACACCTGTACTATGTGCACAGGTCAATGCCTC TGATGTCATCATATTAGAAGGAATTCTTGTGTTCCATGATCAAGGTGTCCGCGATCTGATGAACATGAAGATCTTTGTTG ATACAGGTTTGATACATATATGTCTTCATCCCATCCTCTAATTATATGTCTTGTTGAGTACTTTTTTGTTGTTTGAAAAT GCAGTACAGTGCTATAATTACTAATTATATGGAACAATTTTCTGCCTCTTCATTTCTCCCTTTTCATGTTTTGAGTGGCA TTTCTATTTCTATTAGTGCTTGGTAAAGTAAAATACTTGATAACATAAATGAATCATTTGTTAAGCATACGAAAAAGTAA ACTCCTAGAAAAGACTAATTTCCAGTATAATTTGCTGTTGGACTAGCCATGGGAAGCTAAAGATTGTCTTAGTTTAAAAA GTTCATTGCAATGCTAACTTTTTTAGTTTAGTTACTTCTGCAAAGCTTGATGTTTTTTAAATGCTATGATGGCTATAGTT TCCTAGAATATCTGTAGAAGTAAAAGAGTAGATGAAGTGATCTTTGTTGAAGAAATTGTGAGATTTATTTTTGAATGTAT AATGGTTTAAATCTTCTAACTAATATTTACAGGTTTCACTTTGATATGTTGTTTAGATCTATATTCCCTGTCTCGTGAAA ACATGAATAACTTTGTGAAATGCAACATATCTGGTATATGCCCTGTCATCTAATTAAAGGGTTTAGTAAACCCATTTATC CTCATGTTCCCTACACCCATTATCTGGTAAATTGCTATGATTTTATTTAATATAGTAATGCAAGCTCCCCCACCCCTTCT CGTCCTGTCTAATAGTATATTTGGTTATTAATTGCATACAGATGCTGATGTGCGGCTTGCTCGTAGAATTAGACGTGACA CTGTGGAGAGGGGCAGGGATATAAACTCTGTTCTTGAACAGGTGTGTCCAACAACTGAGTTAGTAACCAGCAGTTTGGCT AATAATTATAACTCTTCTATATTAATTTATATATTTTTGAGAAAGTTTGACATATAATATAGAGGAAATATTGTATTTAT CATGAAATATGATCGTTTACAATGCATATTTGTTCCTGATTGCCTGTATTATTGGCTTTGTAGTATGCAAAGTTTGTTAA GCCTGCATTCGATGATTTTGTTCTGCCATCAAAGAAGTATGCTGATGTGATCATTCCTCGTGGAGGTGATAATCATGTTG CCATTGATTTGATTGTGCAACATATCCGCACAAAGCTTGGTCAGCATGATCTATGCAAAATATATCCAAACGTGTATGTT ATTCAGTCTACATTTCAGGTATCTGTGTTATCATAGCTTGTCAATTTTGTTATTTTCCTTTCTGCTCACCCAAAGAAACT GGATTGCCTTTATGAATAATTTTATAAACCCTTCACAATATTTTATTTTCCTTGGATTTAAAAGAAAAAGAGTGTGCTCA AGTTTTGACTTTTCAAGTCGTAGGTAGCATTGCTAAATGCATGCTGAAACCTTACCATGTCTTTGATGGGCTGTTCACTT GGAATTGTTGTTTCAATGTTATAAAAGTACTTTATGAGCGAAGATTTATTTATTATAAATGGAAATTGGTTGATTTTTTA TATTTCATTGGAATATAATCAAGGTGTTGAAGAAACTAGAAATTGAGGGTAATTATGTTTCAAGGCCACGGCTTGTCATT ATTTACAGTAATTATTAAGTGAGATGAATGCATAGGCTACAATATAGAGGGTGTAATATCCTTTATAGAAGAAAGGAACT TAGATTGTTGTCACATTGGTAATTTATGCAGCTCTATTTTCTGCTCATATGGTACAAGCTGGTTTGATGATTTATTTAAT CTATACTCGGTCCTTTATTAGTTATGCTTAAACATTTCAGATAAGGGGGATGCATACATTGATTCGTGACAAAGACATAT CAAAGCATGACTTTGTATTTTATTCAGATCGACTTATACGCCTGGTACTGCATGCTTTTATAGCTCTGTTGGTCTTTTTT ACTTCATGGGGTTTTAGTACTTAATACATGAGCTATAACTACTTTTGCTGATCTTGATATTCAGGTTGTTGAGCACGGTC TAGGTCATCTGCCTTTCACTGAAATGCAAGTGGTTACTCCAACAGGTAATTGTTTGTTTGTCCTTGATCTCGGTCTTTGC AGTTTCTAACTTATATATTCATTATCTTTCTCTTGTTTGGGGAACAATATTTGGGCTTTGTGAACTGCAAATTATTTAGT AAAGAAGCAATTGTAGACTTGTAGTACACAAATCGAGGTTTGTGTTGACAATGCTAATTAACTGAAATGAGGTTTATGTT ACAGGGTCTGTCTATACTGGTGTTGATTTCTGCAAGAAATTGTGTGGTGTTTCAATTGTTCGAAGGTGAGCTTTGAACCA GGTATTAATTTTGGCAGTTCCAGTCTAAATCATAGGTTGCTAGTGGAAATGCAATGATGGAACTAACAACACCAGTTCCC TTGGTAGATTAATAATCTCAGATTCTCACTTTGGGTGTGTTTACCATCCTGCAAATTTTTAGTCCCTATACTAAAATTGT AGTTATTAACTTCCACACGCTCTCGAGGCTATTTTCTGTTTGCTGAATATTTTTCATTTTCTTACATTATAGTGGTGAAA GCATGGAAAATGCCCTTCGTGCATGTTGTAAAGGCATTAAAATTGGAAAAATTCTGATTCACCGGGATGGAGACAACGGA AAACAGGTAAATAAATTAGTTTGAGTGCATGAAGTTGACTTAGAGAAGCCTTATCTATAGGTTCATGACGTAGTTAGTCT TTAATGGTAAACTCTTCGCTTCTCTGAGCAGCTTATATATGAGAAGCTTCCTAAGGATATTTCAGAACGGCATGTCTTGC TTCTTGACCCTGTCCTTGCTACAGGTGATGATTTCAAATGCCCTCCCACTATTTATTTTTCCACTTTGTCTACTTTACTG TGTCATATTTCAATAGGCTTTATTTCCTATTTCCATCAATAAATGCCCATACTTTTGTTTGCTTTCTTTAATTCATGGGA AAGAAACCCTGTTAGGAATTTGAAATAACACACATAAAAGTATTAACTCGATACTGCTGCATAAGGAACAGGTAAAAGGT GGAAGTAGTGCCACCCTAAGTTGAACCAGCTTATGAGTCTACCTTCCAGAATCATTCTCAGCTGATGGTTACTTAATCCA CTTTGTGTTCACTACTGATAACAAAATTAATATCAATGACTTCCACTGTAGGTAACTCTGCCAACCAGGCAATTGAATTG CTCATTCAGAAAGGAGTACCAGAGTCCCATATTATATTTCTGAATCTCATTTCTGTGAGTTAATTTTGATGCCTTCTTTA CAGATATAATCATAGTAATTTGATTATCATTTCACTGTTTTCCTAAACGGATCTTGTTTTTGAATTCAGGCTCCTGAGGG AATCCATTGTGTGTGTAAAAGGTTCCCATCATTGAAAATTGTCACATCTGAGATTGATGTTGCATTGAATGAAGAGTACC GTGTTATCCCGGGATTGGGCGAGTTTGGCGACCGCTACTTTGGCACTGATGATTGACCATGCAGCATGTCCTAAGGTGGA GACACCTTTTGATATATCAGTTGCTTGATTAAGAACTTGAAATGCAGCTCACTGCATTATAATCATACATTAGATTCAGC ATTAGCCAGTTTGGCTGTGATTTGAGGCAAGCATATTAGAATAATATGAATGCAACTCGCTCTTAGTTTGATTTGCAGCT TATTTGCAGCTTAGAATAATATCAATCCTCTCATCTTGATGTTCATACAAAAAAATTGGAGTAAAACATTCCACTTAGTT CAGTGAAGGTTACGTGGAAAATATTGCTTAGTTAACAATACAATTTGTCTAGCCAGTTCAATCATAGCTCAATATATGCG ATAATGCGAACTCGAACTCGTTATTAAATTTCATATATTTTTATCTGGAGTTAATAAATTGTTTAGCCAGTTCAAATAAA CATAGTATTTTTTTTATTTATTACGTGTGTTTGGCCAACCAATCAGCTGCATTATTTCTATCTCTAGCTGCATTATTTCT ATCTCTAGAAATATGGCTAAGAGCGACATTCCAATCACAATTCAAGATAGCTC
CDS sequence (LotjaGi1g1v0622900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCGGAGGAAACAACGTCGATCGACTACGTCATGGAGGCAGCTTCCGGCCCCCACTTCTCCGGCCTCCGTTTCGACGG CCGTTCACCGTCGTCTCCGTCAACCTCAACCACTCCTCCCGCCGATTCAACCCTCGATTCCCTTCTTCCCAATCCACCCT TCGTCATTGGTGTTTCCGGTGGTACCGCTTCTGGAAAAACCACCGTCTGCGACATGATCATTCAGCAGCTTCACGACCAC CGCGTCGTGCTCGTCAATCAGGACTCGTTTTATCGCGGGTTGAAGCCTGAAGAGCTTGAACGCGTTCACGAGTACAATTT CGATCATCCTGATGCTTTTGACACTGAGCAGCTGTTAGAGTGTATGAGGAAACTCATCAGTGGCCAGATTGTTCAAGTTC CCATTTACGATTTTAAGAAGCATCAACGCTCTTCTGATAGTTTTCGTCAGGTCAATGCCTCTGATGTCATCATATTAGAA GGAATTCTTGTGTTCCATGATCAAGGTGTCCGCGATCTGATGAACATGAAGATCTTTGTTGATACAGATGCTGATGTGCG GCTTGCTCGTAGAATTAGACGTGACACTGTGGAGAGGGGCAGGGATATAAACTCTGTTCTTGAACAGTATGCAAAGTTTG TTAAGCCTGCATTCGATGATTTTGTTCTGCCATCAAAGAAGTATGCTGATGTGATCATTCCTCGTGGAGGTGATAATCAT GTTGCCATTGATTTGATTGTGCAACATATCCGCACAAAGCTTGGTCAGCATGATCTATGCAAAATATATCCAAACGTGTA TGTTATTCAGTCTACATTTCAGATAAGGGGGATGCATACATTGATTCGTGACAAAGACATATCAAAGCATGACTTTGTAT TTTATTCAGATCGACTTATACGCCTGGTTGTTGAGCACGGTCTAGGTCATCTGCCTTTCACTGAAATGCAAGTGGTTACT CCAACAGGGTCTGTCTATACTGGTGTTGATTTCTGCAAGAAATTGTGTGGTGTTTCAATTGTTCGAAGTGGTGAAAGCAT GGAAAATGCCCTTCGTGCATGTTGTAAAGGCATTAAAATTGGAAAAATTCTGATTCACCGGGATGGAGACAACGGAAAAC AGCTTATATATGAGAAGCTTCCTAAGGATATTTCAGAACGGCATGTCTTGCTTCTTGACCCTGTCCTTGCTACAGGTAAC TCTGCCAACCAGGCAATTGAATTGCTCATTCAGAAAGGAGTACCAGAGTCCCATATTATATTTCTGAATCTCATTTCTGC TCCTGAGGGAATCCATTGTGTGTGTAAAAGGTTCCCATCATTGAAAATTGTCACATCTGAGATTGATGTTGCATTGAATG AAGAGTACCGTGTTATCCCGGGATTGGGCGAGTTTGGCGACCGCTACTTTGGCACTGATGATTGA
Protein sequence (LotjaGi1g1v0622900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPEETTSIDYVMEAASGPHFSGLRFDGRSPSSPSTSTTPPADSTLDSLLPNPPFVIGVSGGTASGKTTVCDMIIQQLHDH RVVLVNQDSFYRGLKPEELERVHEYNFDHPDAFDTEQLLECMRKLISGQIVQVPIYDFKKHQRSSDSFRQVNASDVIILE GILVFHDQGVRDLMNMKIFVDTDADVRLARRIRRDTVERGRDINSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNH VAIDLIVQHIRTKLGQHDLCKIYPNVYVIQSTFQIRGMHTLIRDKDISKHDFVFYSDRLIRLVVEHGLGHLPFTEMQVVT PTGSVYTGVDFCKKLCGVSIVRSGESMENALRACCKGIKIGKILIHRDGDNGKQLIYEKLPKDISERHVLLLDPVLATGN SANQAIELLIQKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEYRVIPGLGEFGDRYFGTDD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 19 | 46 | 28 | - | – | |
| PANTHER | 24 | 472 | 449 | 8.5E-275 | – | |
| PANTHER | 24 | 472 | 449 | 8.5E-275 | – | |
| MobiDBLite | 27 | 45 | 19 | - | – | |
| SUPERFAMILY | 47 | 246 | 200 | 2.3E-50 | ||
| Gene3D | 53 | 254 | 202 | 4.8E-67 | – | |
| PRINTS | 53 | 70 | 18 | 3.6E-33 | – | |
| TIGRFAM | 54 | 253 | 200 | 4.8E-76 | ||
| Pfam | 55 | 241 | 187 | 1.8E-48 | ||
| CDD | 55 | 253 | 199 | 2.88994E-114 | ||
| PRINTS | 83 | 94 | 12 | 3.6E-33 | – | |
| PRINTS | 128 | 143 | 16 | 3.6E-33 | – | |
| ProSiteProfiles | 159 | 242 | 84 | 8.752 | ||
| PRINTS | 185 | 195 | 11 | 3.6E-33 | – | |
| PRINTS | 199 | 210 | 12 | 3.6E-33 | – | |
| PRINTS | 221 | 234 | 14 | 3.6E-33 | – | |
| Gene3D | 255 | 472 | 218 | 5.8E-86 | ||
| SUPERFAMILY | 256 | 473 | 218 | 1.84E-62 | ||
| Pfam | 271 | 472 | 202 | 4.4E-74 | – | |
| CDD | 330 | 445 | 116 | 5.87175E-13 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Nucleoside metabolic process | The chemical reactions and pathways involving a nucleoside, a nucleobase linked to either beta-D-ribofuranose (a ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleoside), e.g. adenosine, guanosine, inosine, cytidine, uridine and deoxyadenosine, deoxyguanosine, deoxycytidine and thymidine (= deoxythymidine). | ||
| Molecular function | Kinase activity | Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule. |
Expression pattern of LotjaGi1g1v0622900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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