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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0622900 |
| Transcript ID | LotjaGi1g1v0622900.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Uridine kinase; TAIR: AT5G40870.1 uridine kinase/uracil phosphoribosyltransferase 1; Swiss-Prot: sp|Q9FKS0|UKL1_ARATH Uridine kinase-like protein 1, chloroplastic; TrEMBL-Plants: tr|A0A0S3RWI8|A0A0S3RWI8_PHAAN Uridine kinase; Found in the gene: LotjaGi1g1v0622900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:117007433..117012669) extracted from Lotus japonicus Gifu genome v1.2.
ATGCCGGAGGAAACAACGTCGATCGACTACGTCATGGAGGCAGCTTCCGGCCCCCACTTCTCCGGCCTCCGTTTCGACGG CCGTTCACCGTCGTCTCCGTCAACCTCAACCACTCCTCCCGCCGATTCAACCCTCGATTCCCTTCTTCCCAATCCACCCT TCGTCATTGGTATCTCCACTTTCTTCCCCCTTTCTCTTTCTCTCTCTCCGAAATTTGAATGATTGATCGTGTGTGTGATG GTGCAGGTGTTTCCGGTGGTACCGCTTCTGGAAAAACCACCGTCTGCGACATGATCATTCAGCAGCTTCACGACCACCGC GTCGTGCTCGTCAATCAGGACTCGTTTTATCGCGGGTTGAAGCCTGAAGAGCTTGAACGCGTTCACGAGTACAATTTCGA TCATCCTGGTAAATTATTCACACCGTTTTTCAAATTTGTCAGGTTTCTGAGTGAGTGTTGAGTTGGTTCGTTTTGTTGTT GTTGTTGTATTGTAGATGCTTTTGACACTGAGCAGCTGTTAGAGTGTATGAGGAAACTCATCAGTGGCCAGATTGTTCAA GTTCCCATTTACGATTTTAAGAAGCATCAACGCTCTTCTGATAGTTTTCGTCAGGTGGGTACTACTGCTTGTTGTAAAGT TTGTTTGTTTTTTACTTTCAAATACAGTGGTTTTAACCAAATTGACATTTGTCTCGGATTTACTAGTTTGTTAAATTGAC ATTTGTAGTAGAAGGGTGTGTTTCTTTTTATGTACTAAGAAATATTGTTGGATTGGAAGAAAAGGTATAAACAAGGGTAA AACTATATGTGAAGTTCTTAAAACTTAAAATAGGCAACAACCATGTAGAGCTAAAGGTAGTAGTAGTAATGCTGAAACTG GTGCAACCCTTTGCATTGTGTATATACCTTTGCCCTATTACTAATAAGGAGGAGGTCAACAGGTTTTTTTGTTTTATTTA ATGAAAGGGAAGCAAAGAAAGGATATATTTAGTGAAAAATAGGAGCAGGGGACTTTCTTCCCAAGACCTTTTACTGAACC CCAACTAGATCCTTGAGAATGTCGCATGTGGAGAAAAAAATTCATTCTTATTACTTTTAAGGCTTTGGAAACTTTTAATG AATAGTTCTGAACGGAGGACAAAGCCAAGCTCCACCGTGCATGATGAAAATCCTTTTCTACATGGAAATGACTGATGGGT AGGGATGAAACCAAGTGGTTCCAAAATAGGCGGCCGCTCTCAAAGAGATTTTTTTTTTCTTAATAGAATAGTATGCTAAT GTTGTATTTCCCCCCCTTAAAAATTTTATACTATATCTTTCGATTAGACATTGTTAATTTTGCTTAATGTGTTAAATTTC CGGCCCCTTAGGCCTTACCTATTTTTTTTTGGTTCCGTCCCTCCTGATGAGCAGTTCAGGAGCGTTTGCACAAATGTTTC CTTCTTAGAATTACTCATTACATGTGTACTAGAAGACTAAAATTAATTAGTTCTACAACCTGAGGAGATCTCTGTTGTAT TTAATTGACTGTGTCACTATGACATGTATCAGACGGTTGCTCTACCATTTAACTTCTTTCATTTTTCCTACCTGATGTTT TTTTCTGGTTCTTTGCTTAATATTAATTTACACCTGTACTATGTGCACAGGTCAATGCCTCTGATGTCATCATATTAGAA GGAATTCTTGTGTTCCATGATCAAGGTGTCCGCGATCTGATGAACATGAAGATCTTTGTTGATACAGGTTTGATACATAT ATGTCTTCATCCCATCCTCTAATTATATGTCTTGTTGAGTACTTTTTTGTTGTTTGAAAATGCAGTACAGTGCTATAATT ACTAATTATATGGAACAATTTTCTGCCTCTTCATTTCTCCCTTTTCATGTTTTGAGTGGCATTTCTATTTCTATTAGTGC TTGGTAAAGTAAAATACTTGATAACATAAATGAATCATTTGTTAAGCATACGAAAAAGTAAACTCCTAGAAAAGACTAAT TTCCAGTATAATTTGCTGTTGGACTAGCCATGGGAAGCTAAAGATTGTCTTAGTTTAAAAAGTTCATTGCAATGCTAACT TTTTTAGTTTAGTTACTTCTGCAAAGCTTGATGTTTTTTAAATGCTATGATGGCTATAGTTTCCTAGAATATCTGTAGAA GTAAAAGAGTAGATGAAGTGATCTTTGTTGAAGAAATTGTGAGATTTATTTTTGAATGTATAATGGTTTAAATCTTCTAA CTAATATTTACAGGTTTCACTTTGATATGTTGTTTAGATCTATATTCCCTGTCTCGTGAAAACATGAATAACTTTGTGAA ATGCAACATATCTGGTATATGCCCTGTCATCTAATTAAAGGGTTTAGTAAACCCATTTATCCTCATGTTCCCTACACCCA TTATCTGGTAAATTGCTATGATTTTATTTAATATAGTAATGCAAGCTCCCCCACCCCTTCTCGTCCTGTCTAATAGTATA TTTGGTTATTAATTGCATACAGATGCTGATGTGCGGCTTGCTCGTAGAATTAGACGTGACACTGTGGAGAGGGGCAGGGA TATAAACTCTGTTCTTGAACAGGTGTGTCCAACAACTGAGTTAGTAACCAGCAGTTTGGCTAATAATTATAACTCTTCTA TATTAATTTATATATTTTTGAGAAAGTTTGACATATAATATAGAGGAAATATTGTATTTATCATGAAATATGATCGTTTA CAATGCATATTTGTTCCTGATTGCCTGTATTATTGGCTTTGTAGTATGCAAAGTTTGTTAAGCCTGCATTCGATGATTTT GTTCTGCCATCAAAGAAGTATGCTGATGTGATCATTCCTCGTGGAGGTGATAATCATGTTGCCATTGATTTGATTGTGCA ACATATCCGCACAAAGCTTGGTCAGCATGATCTATGCAAAATATATCCAAACGTGTATGTTATTCAGTCTACATTTCAGG TATCTGTGTTATCATAGCTTGTCAATTTTGTTATTTTCCTTTCTGCTCACCCAAAGAAACTGGATTGCCTTTATGAATAA TTTTATAAACCCTTCACAATATTTTATTTTCCTTGGATTTAAAAGAAAAAGAGTGTGCTCAAGTTTTGACTTTTCAAGTC GTAGGTAGCATTGCTAAATGCATGCTGAAACCTTACCATGTCTTTGATGGGCTGTTCACTTGGAATTGTTGTTTCAATGT TATAAAAGTACTTTATGAGCGAAGATTTATTTATTATAAATGGAAATTGGTTGATTTTTTATATTTCATTGGAATATAAT CAAGGTGTTGAAGAAACTAGAAATTGAGGGTAATTATGTTTCAAGGCCACGGCTTGTCATTATTTACAGTAATTATTAAG TGAGATGAATGCATAGGCTACAATATAGAGGGTGTAATATCCTTTATAGAAGAAAGGAACTTAGATTGTTGTCACATTGG TAATTTATGCAGCTCTATTTTCTGCTCATATGGTACAAGCTGGTTTGATGATTTATTTAATCTATACTCGGTCCTTTATT AGTTATGCTTAAACATTTCAGATAAGGGGGATGCATACATTGATTCGTGACAAAGACATATCAAAGCATGACTTTGTATT TTATTCAGATCGACTTATACGCCTGGTACTGCATGCTTTTATAGCTCTGTTGGTCTTTTTTACTTCATGGGGTTTTAGTA CTTAATACATGAGCTATAACTACTTTTGCTGATCTTGATATTCAGGTTGTTGAGCACGGTCTAGGTCATCTGCCTTTCAC TGAAATGCAAGTGGTTACTCCAACAGGTAATTGTTTGTTTGTCCTTGATCTCGGTCTTTGCAGTTTCTAACTTATATATT CATTATCTTTCTCTTGTTTGGGGAACAATATTTGGGCTTTGTGAACTGCAAATTATTTAGTAAAGAAGCAATTGTAGACT TGTAGTACACAAATCGAGGTTTGTGTTGACAATGCTAATTAACTGAAATGAGGTTTATGTTACAGGGTCTGTCTATACTG GTGTTGATTTCTGCAAGAAATTGTGTGGTGTTTCAATTGTTCGAAGGTGAGCTTTGAACCAGGTATTAATTTTGGCAGTT CCAGTCTAAATCATAGGTTGCTAGTGGAAATGCAATGATGGAACTAACAACACCAGTTCCCTTGGTAGATTAATAATCTC AGATTCTCACTTTGGGTGTGTTTACCATCCTGCAAATTTTTAGTCCCTATACTAAAATTGTAGTTATTAACTTCCACACG CTCTCGAGGCTATTTTCTGTTTGCTGAATATTTTTCATTTTCTTACATTATAGTGGTGAAAGCATGGAAAATGCCCTTCG TGCATGTTGTAAAGGCATTAAAATTGGAAAAATTCTGATTCACCGGGATGGAGACAACGGAAAACAGGTAAATAAATTAG TTTGAGTGCATGAAGTTGACTTAGAGAAGCCTTATCTATAGGTTCATGACGTAGTTAGTCTTTAATGGTAAACTCTTCGC TTCTCTGAGCAGCTTATATATGAGAAGCTTCCTAAGGATATTTCAGAACGGCATGTCTTGCTTCTTGACCCTGTCCTTGC TACAGGTGATGATTTCAAATGCCCTCCCACTATTTATTTTTCCACTTTGTCTACTTTACTGTGTCATATTTCAATAGGCT TTATTTCCTATTTCCATCAATAAATGCCCATACTTTTGTTTGCTTTCTTTAATTCATGGGAAAGAAACCCTGTTAGGAAT TTGAAATAACACACATAAAAGTATTAACTCGATACTGCTGCATAAGGAACAGGTAAAAGGTGGAAGTAGTGCCACCCTAA GTTGAACCAGCTTATGAGTCTACCTTCCAGAATCATTCTCAGCTGATGGTTACTTAATCCACTTTGTGTTCACTACTGAT AACAAAATTAATATCAATGACTTCCACTGTAGGTAACTCTGCCAACCAGGCAATTGAATTGCTCATTCAGAAAGGAGTAC CAGAGTCCCATATTATATTTCTGAATCTCATTTCTGTGAGTTAATTTTGATGCCTTCTTTACAGATATAATCATAGTAAT TTGATTATCATTTCACTGTTTTCCTAAACGGATCTTGTTTTTGAATTCAGGCTCCTGAGGGAATCCATTGTGTGTGTAAA AGGTTCCCATCATTGAAAATTGTCACATCTGAGATTGATGTTGCATTGAATGAAGAGTACCGTGTTATCCCGGGATTGGG CGAGTTTGGCGACCGCTACTTTGGCACTGATGATTGA
CDS sequence (LotjaGi1g1v0622900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATCATTCAGCAGCTTCACGACCACCGCGTCGTGCTCGTCAATCAGGACTCGTTTTATCGCGGGTTGAAGCCTGAAGA GCTTGAACGCGTTCACGAGTACAATTTCGATCATCCTGATGCTTTTGACACTGAGCAGCTGTTAGAGTGTATGAGGAAAC TCATCAGTGGCCAGATTGTTCAAGTTCCCATTTACGATTTTAAGAAGCATCAACGCTCTTCTGATAGTTTTCGTCAGGTC AATGCCTCTGATGTCATCATATTAGAAGGAATTCTTGTGTTCCATGATCAAGGTGTCCGCGATCTGATGAACATGAAGAT CTTTGTTGATACAGATGCTGATGTGCGGCTTGCTCGTAGAATTAGACGTGACACTGTGGAGAGGGGCAGGGATATAAACT CTGTTCTTGAACAGTATGCAAAGTTTGTTAAGCCTGCATTCGATGATTTTGTTCTGCCATCAAAGAAGTATGCTGATGTG ATCATTCCTCGTGGAGGTGATAATCATGTTGCCATTGATTTGATTGTGCAACATATCCGCACAAAGCTTGGTCAGCATGA TCTATGCAAAATATATCCAAACGTGTATGTTATTCAGTCTACATTTCAGATAAGGGGGATGCATACATTGATTCGTGACA AAGACATATCAAAGCATGACTTTGTATTTTATTCAGATCGACTTATACGCCTGGTTGTTGAGCACGGTCTAGGTCATCTG CCTTTCACTGAAATGCAAGTGGTTACTCCAACAGGGTCTGTCTATACTGGTGTTGATTTCTGCAAGAAATTGTGTGGTGT TTCAATTGTTCGAAGTGGTGAAAGCATGGAAAATGCCCTTCGTGCATGTTGTAAAGGCATTAAAATTGGAAAAATTCTGA TTCACCGGGATGGAGACAACGGAAAACAGCTTATATATGAGAAGCTTCCTAAGGATATTTCAGAACGGCATGTCTTGCTT CTTGACCCTGTCCTTGCTACAGGTAACTCTGCCAACCAGGCAATTGAATTGCTCATTCAGAAAGGAGTACCAGAGTCCCA TATTATATTTCTGAATCTCATTTCTGCTCCTGAGGGAATCCATTGTGTGTGTAAAAGGTTCCCATCATTGAAAATTGTCA CATCTGAGATTGATGTTGCATTGAATGAAGAGTACCGTGTTATCCCGGGATTGGGCGAGTTTGGCGACCGCTACTTTGGC ACTGATGATTGA
Protein sequence (LotjaGi1g1v0622900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MIIQQLHDHRVVLVNQDSFYRGLKPEELERVHEYNFDHPDAFDTEQLLECMRKLISGQIVQVPIYDFKKHQRSSDSFRQV NASDVIILEGILVFHDQGVRDLMNMKIFVDTDADVRLARRIRRDTVERGRDINSVLEQYAKFVKPAFDDFVLPSKKYADV IIPRGGDNHVAIDLIVQHIRTKLGQHDLCKIYPNVYVIQSTFQIRGMHTLIRDKDISKHDFVFYSDRLIRLVVEHGLGHL PFTEMQVVTPTGSVYTGVDFCKKLCGVSIVRSGESMENALRACCKGIKIGKILIHRDGDNGKQLIYEKLPKDISERHVLL LDPVLATGNSANQAIELLIQKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEYRVIPGLGEFGDRYFG TDD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 401 | 401 | 1.1E-255 | – | |
| CDD | 1 | 182 | 182 | 3.42831E-99 | ||
| Gene3D | 1 | 183 | 183 | 4.1E-55 | – | |
| PANTHER | 1 | 401 | 401 | 1.1E-255 | – | |
| SUPERFAMILY | 8 | 175 | 168 | 3.52E-37 | ||
| Pfam | 11 | 170 | 160 | 6.9E-43 | ||
| PRINTS | 12 | 23 | 12 | 6.3E-23 | – | |
| PRINTS | 57 | 72 | 16 | 6.3E-23 | – | |
| ProSiteProfiles | 88 | 171 | 84 | 8.752 | ||
| PRINTS | 114 | 124 | 11 | 6.3E-23 | – | |
| PRINTS | 128 | 139 | 12 | 6.3E-23 | – | |
| PRINTS | 150 | 163 | 14 | 6.3E-23 | – | |
| Gene3D | 184 | 401 | 218 | 3.8E-86 | ||
| SUPERFAMILY | 185 | 402 | 218 | 1.23E-62 | ||
| Pfam | 200 | 401 | 202 | 3.0E-74 | – | |
| CDD | 259 | 374 | 116 | 8.51639E-13 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Nucleoside metabolic process | The chemical reactions and pathways involving a nucleoside, a nucleobase linked to either beta-D-ribofuranose (a ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleoside), e.g. adenosine, guanosine, inosine, cytidine, uridine and deoxyadenosine, deoxyguanosine, deoxycytidine and thymidine (= deoxythymidine). | ||
| Molecular function | Kinase activity | Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule. |
Expression pattern of LotjaGi1g1v0622900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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