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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0628900 |
| Transcript ID | LotjaGi1g1v0628900.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Kinase family protein; TAIR: AT5G13160.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q9FE20|PBS1_ARATH Serine/threonine-protein kinase PBS1; TrEMBL-Plants: tr|G7KW74|G7KW74_MEDTR Receptor Serine/Threonine kinase; Found in the gene: LotjaGi1g1v0628900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:117942003..117948087) extracted from Lotus japonicus Gifu genome v1.2.
TGAAGAGCAACAGTTAGAGAGACAAATGTGGCATAAAAGGACAGATTTGGAGAGAAAGTACACCCACACAAAAAACAAAT GAAATTTGGCATGCACATCATCCCCATCACCATCACCCTCATCATCATCATCATCATAGAAACCATGAAACTGTACCATT AAAATCCCCTGAGTTTTTTCTCCAATTTCCCTGCAAATAAATTCTTCTCCTTTTCCCCACAACCCAGATATCCAAATTCC ACACACATTGTTGTTGTTGTTATAGTAGCATAGCATGATCCAATGATGCATGCATCGTTGTTACAACGTTCCATTCAACA ACGACGTTTCAACGTGTCACAGTGAAGATTCTGTTGATAATTGAAATCCGTGTACGCATTCTTCTGCGTCGTTCCATTCT TGTTTCTTCTCTCTGTTTCTGATTGGTGGGTGGTTGTTATACAAGAAAGGGCTTGCTTTTGGTTCTGAATTGTGCTAGAG GGTAATGGGTCGTTGCCCTTGTTTCGGTTCGAGGAAGAAGAGTAAGGAGAAGAATCTCAACGATCGGGAAGAGGAGGAAA AGAAGCTTAAATCTGTAGCTTCAACTGTTTCTGGAAGATCTTCAGGTTTTCTTATCACATTTGATTCATTTGCTCTATTT TTCTTGTTTTGAATTGTTAAACCTTGCTTGAAATGTAATCCCTAATTTGTAAAAAATTTCAATGGGTTTTTGGGTTTAAG CCTTTCATTCACTGTGGTTGATTCTGATTACTATTCTTTATTTTCAGTTTTTCTGTGTTTCTTTCTCCAATTTTTTGATC ATGTTTGTTTGTGAGAGTTAAGATAAATTGGCATTACAATTTGTTCTAGTTACTCCTTAGCTGAAGTTTCTGCTGATTCT TGCTTATAATTCTTGCAAGATGGTTGAAAAAGAAGATAAAGAAAAAGGCTTGGGTTGTTGTTATCTAAGGGTACTTTTTA GAAGTCTAGACAAAGCACACACCTTGGAAAACCAATGTAAATCAAACAAGATAACTACACAATTAAGGAAATTCTCAAAT TTCATACCACTTAAAGGCCTTCTTTTTAGCTATTATGATCTCTTTTCACTCTAATCTTAGTGAAGCACGAGCGTAAATTT TACGTTTGATTAGAAATCGTTGCGGTCGGATTTTCTGACTGTCTCTGTGAATTGATATACCTTCATTCTTTTGGCCTGTC AGGGAGCTTATTCTTCACTATTCACTATGTTTGGATTTGATTATTTTTTGGGAATTTTGTTTTTTAATCTCTCTTAATAT TTTATTTGTTAGCTATTTTTAACACAGATTAAGTGAATCCAAACATACAGAGTACTCAATTTGCCCTGATCTGCATAATT TGGAAACTAGACCAAATATTCATTTTATATGCTCCAATTTTTTGTGATTAAAAGGGCCTCACTTAGCTAACTATCCTTAG TCAGGAAAGTATCACTTCTGCTTTATCGTATAGAACCTTCTGAACATTTTTGGAAGCTTATGCTTCGTCTGAAATCATAT TAGGATACTAAAAGTTACAAAACGTGCTAGGAAGAGCTTATCTCCCTTGGTGACATACACACTTTGTGTAATGATTTAGC ACCTCTGTTCTTCTCCTGATTACCAGAATCTCCTTTCCCTCTTGATCAATAACTTTTAGGTCTCATTTGCACACAATTTT CTAAGAGGGAAGATAGGTGTGACTGAGAAATGATAATCAGGAAAACATAATCCACATGTTGAGTATATGCTTTTTATCAA TTTTGAAGGAAACTATTTGTAATTTGAATTTCTTAAAGGTTACCCTCCTCCCCTTGGAACTCTCTGGTTGCTTCAACTCT CATTATGCTCTTTGGGTTATCATTTCTATAATGACATTCATTTCCCATCATTCTTTGGCATGATAATTATCGTAAGATTA TCAAATATAGTGAACATTTTAAGCTTAAATACAGCTCCATCAATTAATTCTGCATATTTTCAACCCTAGCAGCTACATCT AGATGGTCAATATTTTTAGAAGAAAGCTCCTATTTAAAGACTAAATATTATATCTTTTTCATGTGTCTACTTAGTACAAA TTGATTAGATATCTTCATTGTCACACTGAGTTAATATTTTGCGACCAAAAACATGTCATGTAGATATGTGGACACATTAT ACATAATGGCTCCAAATTACAGGATAATGGTCTAAACATCTTACTTAGACTTAGAATATTAGTTCACCTTTAGCAATAAC ATGTTTAGACTTTCATTGTAGCAGTTTAGTGTGTAAATAATTTTTATGATCAGAGTCTTTTGCCAGTTTCAACATTACCT TTTTCATGAGTTTAATGAACTTCCCTGCTCTTGCAACCCACCCACCTAGAAGGTTGTTGATGAACTTTTACCCTCTCATC TTCCAGTACCACTACTAGACAGAGAGGGTCTTTGAAAAACGTTCGTATCAGCTTATAGAGTAATTAACTGCTTTGGCTTC CCTATAAGTAAAAATGTTAGACATAGTTTTGCCACACCTGAGTTTTGAACACTATTCAATCCAGTAACACTTTGTGTTTG GATACCAGTTGAGTACAATGTGAACTCACTTTCATCTCGATACATAAGAAGAATTTCGTTCATTTTGTCTTGAAGTGCAT GTAAACCTCTATTTGCACTGGTATAATAACAAAACACACCCTTATGCTACTAGATAGAGTAAATGGCAATGTAATGAAAG GGATGGAAACTGTAATTGTGAAATTATCAATGCCTGCTCTGTGACTGTTTGGCTTTGGACTGATGGAAGGCCTTCATTAT TTTGATCTATTGGCTACTCAGAAAATACTGTTGACTCCAGAATGCTTGAGATAGTAGGAAATAAGCTTATGTCTCAGAGT TGACATGATATGGTTTGATACAGGACGAAGATCAGAAGCAACTCCAACAGAGGATACTGACAGTTCTAATAAGGCTCAGA TATTCACCTTCCGAGAGCTTGCAACAGCAACAAAAAATTTTAGGGATGAAACTTTTATTGGTCAAGGTGGATTTGGAACA GTTTACAAAGGACAGCTAGAGAGAACGAATCAGGTATAATTTGATGTACGGATTTTTTTTTGCTCCTGTTACATTGGTGT TGAATATGTTGATTCTTTTACTAAGACAAGAGGTTTGGAACATTTATTCAGGTTGTGGCTGTTAAAAGACTTGATACAAC TGGTCTCCAAGGAGAGAAAGAATTTCTTGTGGAGGTTCTCATGCTTTCTCTTCTACATCATCCCAACCTTGTTAATATGA TTGGGTACTGTGCTGAAGGGGATCAACGTCTACTTGTGTATGAATACATGCCTATGGGATCCTTAGAATCTCATCTCCAT GGTAATGTAATGCAAGACTTAGTTTTGTTAACATCAAACTGCCATTAGTTGCACTTGCTTACTAATTACTGGCCTATCTA CCCTGCCTCAGTTTTCCCTGAAAAAAAAAAATGAAAAAAATTTATATATAGGCTCAGTTTACCTGAAAGGATGAAATAGT GTGCACTTCACAAAGTTAAAGAAGTTAATTCTGAAGGCTCTGCAGATAATGATGGTTTCAAAACCAAAATTCACTTGTAC AATTATACCTTATCTCTATCAATCATCAATCAAACCTCTTTTGCAACAAAGTAGTTCATATTTTCTACTCTTTTAACACA CTAGTGTTACTGACCTGGATCCCAGCAGTAAGATAATATTGCATTCACTGAAGTCATGAGACTGTGACCGATCCGATCTT AATCAGACGGCCCCAGTCTGTACACATAAAATCAACCTATTTAAATCAGAGTCGTCCGATGAAAGATCAAAAAGTTGATG TCCCATGACTTCAGTGAGTTCAGGATTATCTAACTGCAGTGAATTTGAATTCGCTAGTTACCTATGCAAATGTTGATCCA TATCTGTGATTATATTTTAGTAGTGTTGATTTGATTATGGTTATGTGCAGATCTTTCATCTGACCAAGAACCTCTTGATT GGAATACCAGAATGAAGATAGCTGCTGGGGCCGCAAGAGGATTAAATTATCTGCACCATGAAGCAAATCCTTCTGTTATA TACAGGGATCTGAAAACATCCAATATACTCTTGGGTGAAGGTTTCCATCCAAAACTTTCTGATTTTGGGCTTGCAAAGTT TGGTCCAACTGGAGACCAATCATTTGTTAACACAAGGGTCATGGGAACACATGGTTACTGTGCTCCTGAGTATGCCACAA GTGGAAAATTAACAATGAGATCTGACATATACAGTTTTGGGGTTGTGTTGTTGGAGCTAATTACTGGACGTAGAGCATAT GATGAAACCCGTGGCCCTGAAAAGCATCTTGTTGACTGGGTAAGTACTATCAAATTATATTTATTTTCGTACTTGTGGAA TCATAATGGTTGACAATGTATGGAATCATAACCGTTGATCAAAATCATCTGTTAAGATTTATTAAACCCAGTTTCTGATA TTTGTTATACATTGATTACGTTCTATCATAATTTCAACATTCTAAAGATGTCAGATTTGGTGCAACTTTACGCATCTTCT CATCAGTCTCTTTTAGTATTTCTAACTTATCATTGTGCACTTGAAAGAGGAAGACGCTGAATTAATAAGCATTTTTTTGT TTGATTAGCTGCTGTTAATCTATGAATGTCTTTGCATGTGAATATGGTAAGGAAGGAATTATAATGCCCTTAGATTGAAC AAATATTTGATTTCTCAATTTGCTATCTAGGATCCAGGTGATATGACACATTGCTTATTATATTCTTGGGATCAAACATG AGTTTCAGAATATTACATGATCTTTCTACTTTATATCCAATTGGGTTAAATCTTAAATGCTATCTGAACTCTGAAGTCTC AGTTATGAGGAGATAATCTAAAATAATCACTCTTCAAGAAATCATAACTTAAGAATACACAATGGTTTTAGTTGGCTACT ATGCTTTTCATTCATAAGTAAGTAGTTGTCACAGCATTGTTTTTCCATCTGCAAGGCTAACTGAACTTGGTTTCCACATA CCTGTAGGCACGCCCAATGTTTAGAGACAAAAGGAATTTTCCAAGATTGGTAGATCCGCGTTTGGGAGGTCACTTCCCAG GAAGTTGTCTAAAGATGGCTATTGAAATGGCTTCCATGTGTCTTCGAGAGGAGCCGCGGCACCGGCCTGATGCAGGTGAT ATAATGCTAGCCCTAGATTTTTTGTCATCCAAGCAGTATGTCCCAAAAGTATCAGGTACAGTTAAGACAGGAGGGATGGA GAGTGGTGACTCCCCAAGTCCAAAAGAAGGATCAATGGTTTTGGCTAAAGACTCACAGAGAGAGAAAGCTGTTGCAGAGG CCAAGCTTTGGGGGGAGACATGGAGACATAAAAGAAAACAAAGTGGCCAAAGTACTCCTGAGGATGCAAGTAGGTAGTGA AATTGAATTTTTGTTCTCTTTTCTACATGCACAGGGTATCAAGGAAGGTTCAACATAAAGGGAAAGCATGTGTTCAATAT TTAAATGTAGACAAATAGAATTGGTTAGCCAGCTATTTATAAAAAGTGGTGTTTAGGAAATAGTGAAGCTGAGGCTCAAC TTAATGTGATTTGACATGAGTTTTCACTATTAAGGATTGCTGCACTAAAACAAGAGATATTATTAACAGCTCAATGTTTT AGCATACCTTAATACTGTTGGATGCAAACACAATTTTTCGTTTATAATGGAAAATAGATAGCAAATTGATGAAAGTTACA ATGGATTGCTGAGATTTACTGTTATGTAAATGTATGCGACGTTTAAGCTTGAGGCTATGTTTGGATACCTCTTGGCATTA ATGCAAACAGACGTTAAATTAGCATTCACTTCAAGACGAAAAGTGAACGAAACTCTTCTTATGAGTCAGGATGCAAGTCC GTTCACATTGCACTTAACTAGTGTCTAAACGAGTCATGATGAAAAATCCTAACAAGCGGAATATTGGGCATGTTCCAGTC TAATTCTTGAGGGGCCAAAGAGCTTGTTCGGGCACGGGCTTATTTTATTGGAGCTTATCTACTAGAAAATGTACTAAGTA TAAGT
CDS sequence (LotjaGi1g1v0628900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTCGTTGCCCTTGTTTCGGTTCGAGGAAGAAGAGTAAGGAGAAGAATCTCAACGATCGGGAAGAGGAGGAAAAGAA GCTTAAATCTGTAGCTTCAACTGTTTCTGGAAGATCTTCAGGACGAAGATCAGAAGCAACTCCAACAGAGGATACTGACA GTTCTAATAAGGCTCAGATATTCACCTTCCGAGAGCTTGCAACAGCAACAAAAAATTTTAGGGATGAAACTTTTATTGGT CAAGGTGGATTTGGAACAGTTTACAAAGGACAGCTAGAGAGAACGAATCAGGTTGTGGCTGTTAAAAGACTTGATACAAC TGGTCTCCAAGGAGAGAAAGAATTTCTTGTGGAGGTTCTCATGCTTTCTCTTCTACATCATCCCAACCTTGTTAATATGA TTGGGTACTGTGCTGAAGGGGATCAACGTCTACTTGTGTATGAATACATGCCTATGGGATCCTTAGAATCTCATCTCCAT GATCTTTCATCTGACCAAGAACCTCTTGATTGGAATACCAGAATGAAGATAGCTGCTGGGGCCGCAAGAGGATTAAATTA TCTGCACCATGAAGCAAATCCTTCTGTTATATACAGGGATCTGAAAACATCCAATATACTCTTGGGTGAAGGTTTCCATC CAAAACTTTCTGATTTTGGGCTTGCAAAGTTTGGTCCAACTGGAGACCAATCATTTGTTAACACAAGGGTCATGGGAACA CATGGTTACTGTGCTCCTGAGTATGCCACAAGTGGAAAATTAACAATGAGATCTGACATATACAGTTTTGGGGTTGTGTT GTTGGAGCTAATTACTGGACGTAGAGCATATGATGAAACCCGTGGCCCTGAAAAGCATCTTGTTGACTGGGCACGCCCAA TGTTTAGAGACAAAAGGAATTTTCCAAGATTGGTAGATCCGCGTTTGGGAGGTCACTTCCCAGGAAGTTGTCTAAAGATG GCTATTGAAATGGCTTCCATGTGTCTTCGAGAGGAGCCGCGGCACCGGCCTGATGCAGGTGATATAATGCTAGCCCTAGA TTTTTTGTCATCCAAGCAGTATGTCCCAAAAGTATCAGGTACAGTTAAGACAGGAGGGATGGAGAGTGGTGACTCCCCAA GTCCAAAAGAAGGATCAATGGTTTTGGCTAAAGACTCACAGAGAGAGAAAGCTGTTGCAGAGGCCAAGCTTTGGGGGGAG ACATGGAGACATAAAAGAAAACAAAGTGGCCAAAGTACTCCTGAGGATGCAAGTAGGTAG
Protein sequence (LotjaGi1g1v0628900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGRCPCFGSRKKSKEKNLNDREEEEKKLKSVASTVSGRSSGRRSEATPTEDTDSSNKAQIFTFRELATATKNFRDETFIG QGGFGTVYKGQLERTNQVVAVKRLDTTGLQGEKEFLVEVLMLSLLHHPNLVNMIGYCAEGDQRLLVYEYMPMGSLESHLH DLSSDQEPLDWNTRMKIAAGAARGLNYLHHEANPSVIYRDLKTSNILLGEGFHPKLSDFGLAKFGPTGDQSFVNTRVMGT HGYCAPEYATSGKLTMRSDIYSFGVVLLELITGRRAYDETRGPEKHLVDWARPMFRDKRNFPRLVDPRLGGHFPGSCLKM AIEMASMCLREEPRHRPDAGDIMLALDFLSSKQYVPKVSGTVKTGGMESGDSPSPKEGSMVLAKDSQREKAVAEAKLWGE TWRHKRKQSGQSTPEDASR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 57 | 57 | - | – | |
| PANTHER | 4 | 381 | 378 | 8.1E-202 | – | |
| PANTHER | 4 | 381 | 378 | 8.1E-202 | – | |
| MobiDBLite | 8 | 31 | 24 | - | – | |
| Coils | 11 | 31 | 21 | - | – | |
| Gene3D | 32 | 149 | 118 | 5.0E-35 | – | |
| SUPERFAMILY | 52 | 348 | 297 | 2.16E-85 | ||
| ProSiteProfiles | 73 | 349 | 277 | 40.414 | ||
| SMART | 73 | 349 | 277 | 6.1E-52 | ||
| Pfam | 74 | 343 | 270 | 4.4E-49 | ||
| ProSitePatterns | 79 | 102 | 24 | - | ||
| CDD | 79 | 342 | 264 | 5.33959E-105 | – | |
| Gene3D | 150 | 362 | 213 | 8.6E-61 | – | |
| ProSitePatterns | 196 | 208 | 13 | - | ||
| MobiDBLite | 360 | 419 | 60 | - | – | |
| MobiDBLite | 382 | 412 | 31 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi1g1v0628900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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