Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
Field | Value |
---|---|
Gene ID | LotjaGi1g1v0634600 |
Transcript ID | LotjaGi1g1v0634600.2 |
Related isoforms 2 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Protein kinase family protein; TAIR: AT3G26700.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q9SA72|Y1357_ARATH Probable receptor-like protein kinase At1g30570; TrEMBL-Plants: tr|I3S4W6|I3S4W6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0634600 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:118910793..118914140) extracted from Lotus japonicus Gifu genome v1.2.
ATGTCAAGTTCTCTTGCAGCAATATTAGGAGGAGCTGCAGGAGGAGCCGTGGCATTGGTAGGGATATCTATAATACTTTT ATGGTTTTGTTTGTGTCGCCAGAGGAGTGTTTCTAGGACTTCGGAGACAGGTTCCTCTGATCCTTCCCAAGGTAACATCT AACACCAGTGTGCGTGTGTGTGAGGGTTTTAAATTGCGGTTGCGGTTCCAACTGCATCAGGGAATTGCAGACATATGCGG ATTGAAACCCTATTATGTAATCGGGTTGATTCGGTCGCAACTGCAATTGCAATGCTGATGCGGGGACTCCAAAATCCGTT ATGTTATGGCCGCAATTGCGATTACGGACCGCAATTTGAAACCCTATTAGTACGTATTAATTTGACACATCTATTATGTA ATCGGGTTGATTCGGTCGCAACTGCAATTGCAATGCTGATGCGGGGACTCCAAAATCCGTTATGTTATGGCCGCAATTGC GGTTACGGACCGCAATTTGAAACCCTATTAGTACGTATTAATTTGACACATCTATTATGTAATCGGGTTGAAGCGGCCGT AATTGCAATTGTGATGCTGATGCGGGGGGACTACACAATCCGTTGTGCTACGGCCGCAATTTGAAACCCTATTAATATGT ATTAAATTGACTCATCTATTCTGTATTCAACATATGTTATCTCCCTCAAGTGTTTATTGTGATGCAAAGAAATTCCATTT ACGTGCAGTGGGAAGACATGGTGCAATTGAGTTGCAGATACGAGATACTAGGCGTTTTGCGATGGAAGAACTTTCTCTGG CAACAAAAAATTTCAATGACAGAAATTTGATTGGACAAGGGAAATTTGGGGAAGTTTATAATGGTTTACTTCAAGATGGG GTGCTTGTAGCCATCAAAAAACGCTTTGGAACCCCGAGTCAGGAATTTGTTGATGAGGTAATACTTAGTTTCCTACTCTA AAACCTGACTGTATGAGATACAATGAAATATATCATTGATTTGAAATGACTTCCCGTGCCGCATTCTATAGAATAGTGAA GAGATTATGAATACTTCTTAAAAGTACTTATGATTTACTTTAGAGATGAATGACTAGTAAGTAAAATTGTTTTCCTTGAA CTGTTTCATACCGATTCCCTCTTCCTTGTCTGTTTCTGCTTCTGAGTTTTCATGAGAACTCTGTAGTAGTTGTCATTTAG TTTCAGATACTATTTGATTCAGAAAGTTAAAATTTTCTTTGCCTATTGAGTCACTCTAACAACTACTTTTGTGTTCAATC ATGTCTGAAATAAGTCTTTATAAATATGTGAGCATAATCAGTATCGCTATCTTGCATCTTTCTAATTGGCAGGCTTCAAT ATGTAGGAATTCTTAAGCCAGTTTGATGATTAAATATAAGACAAAACTGTTTCAGAGTTTTTATTTTGTTTGCCAGTTAT TTTCATTTCATAGTTCTGATGGATTAGCAATTTGCATACATAACTTATTTTAGTCTTAAATACAGGTATCTCTTATTGAT CACTTTCTTGCTTTTGATCTAACATGACTGAGTTTTACTTTAGGTACGCTATCTCTCGTCTATTCAACATCGGAATATCG TAACTCTTATAGGCTACTGCCAGGAAAACAATCTGCAGTTTCTCATATATGAATATGTGCCTAATGGAAGCGTCTCCAGT CACTTGTATGGTAAATTTCTATACAGTCACGTCGAAGCATATTCAATTTCTGTCTTGTATATTACTTGAACTTTTAATTT CATATCTATTCAAATATTTCTTACTCATACTCTCAGTTCTGCTATCCGGTTCTTCATGTATGCAAAACTGAATTGAAATA TGATACATTTCATAAATTTCATGGTGTCTTGTTTTAGATGAATGAACCCCTTATTGAAGCTCATGATTGTGGCTTTGATT TTCCTTTGCAGGCGCTGGTCAACAATCTCAAGAGAAGCTAGAATTCAAGCTTAGGCTTTCAATAGCTCAAGGTGCAGCAA AAGGTGATCCTTTGCTAAATCAGTGAGCATTTGTGGCTTTGCTGGTATCAGTTTTCTTCTATTTTAGATAAAATATCTTA ATGGAACCCACAAATTCTTTTTGTAAGCCATCATAAAACTTGTAGTTATTTGGTAATCCTTATTCCCTTCTCTATGCATA AAGCTCTGAGGAACTTGTTTTTGATTTTCCAAACCTCATTCATACTATTCTATGCAGGTTTAGCTCATATCCACTCTCTG AGTCCCCGTTTGGTGCACAAGGATTTCAAAACAGCTAATGTTCTTGTAGATGAAAACTTCATTGCTAAGGTTGCAGATGC TGGGCTAAAACATTTTTTGGGGAGAGTTGACATTGCAGGATCATCTTCTCAAGTGGCAGCAGATGAGATATTCCTTGCAC CTGAGTAATAACTCTAAGGACCCTCTATGATTTGTGCAGTTGTGCTGTTCTGGTTATGCATGATGTTTTCATGATTTGTG TACATCATTCCCTGCAGGGTGAGAGAGTTCAGACGATTTTCTGAAAAGAGCGATGTATACAGCTATGGCGTATTTTTGCT TGAATTGTTGAGTGGGAAGGAAGCAACAGAATCACCCTCTCCGGACTCCAATCTAAATCTGGTTGAATGGGTATGTGATC ATTTTCAAACATCATGGATGTAGTAAAGGTGCCAAGCCAAGCCCTTCAGAGCCTGTTTATTTAGGGCGCATAATCTTAGA TATGTTGGAATCTCATAATCAATTTTGATAGAGTAATATCGATTTTGGATGACAAGATAAATGTTTGTGAGTCATTTTGG AGAATTGATTTCAGTCCCAAAATCAATTCTGCTTGAAACTGGAGAGAGTAGTTTTTGCGTTCAACATAATCAATTCTGAG ATTTTACAATTGGATTTCACAACATTACCTAGAAAAATCATTTTTTCCATAAATGTATCAAAGCATAAATCATTTTACTG TCAACTCACTCTTACTATAGTCAATTTTGTCAAAATCATATTGTGCTTTGTACCAATCTTGCATCTAAAATCCAGGTGCT GTGCTAAGTGATTGATTTTTGCTCTTTTTTTTCCTCTCTAACAGGTTCTAAGAAATCAAGACCGCCACCTTATGTCCAAA ATCATTGATAGGAGATTGGAGAGTAGTTTCACAGCTGAAGGCATGGAAGCTTACATCCTGCTTGTAATCAGATGCTTGGA TCTTTCGAGCGAAAGACGACCCGCCATGAGCTATGTGGAAACGGAACTTGATAGAATCCTGGAGAAAGAAATGAACTTGA CAACAATCATGGGTGAAGGAACCCCAACTGTGACTCTTGGAAGTCAGTTATTCAAAGCAACTAAATAA
CDS sequence (LotjaGi1g1v0634600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCAAGTTCTCTTGCAGCAATATTAGGAGGAGCTGCAGGAGGAGCCGTGGCATTGGTAGGGATATCTATAATACTTTT ATGGTTTTGTTTGTGTCGCCAGAGGAGTGTTTCTAGGACTTCGGAGACAGGTTCCTCTGATCCTTCCCAAGGAAGACATG GTGCAATTGAGTTGCAGATACGAGATACTAGGCGTTTTGCGATGGAAGAACTTTCTCTGGCAACAAAAAATTTCAATGAC AGAAATTTGATTGGACAAGGGAAATTTGGGGAAGTTTATAATGGTTTACTTCAAGATGGGGTGCTTGTAGCCATCAAAAA ACGCTTTGGAACCCCGAGTCAGGAATTTGTTGATGAGGTACGCTATCTCTCGTCTATTCAACATCGGAATATCGTAACTC TTATAGGCTACTGCCAGGAAAACAATCTGCAGTTTCTCATATATGAATATGTGCCTAATGGAAGCGTCTCCAGTCACTTG TATGGCGCTGGTCAACAATCTCAAGAGAAGCTAGAATTCAAGCTTAGGCTTTCAATAGCTCAAGGTGCAGCAAAAGGTTT AGCTCATATCCACTCTCTGAGTCCCCGTTTGGTGCACAAGGATTTCAAAACAGCTAATGTTCTTGTAGATGAAAACTTCA TTGCTAAGGTTGCAGATGCTGGGCTAAAACATTTTTTGGGGAGAGTTGACATTGCAGGATCATCTTCTCAAGTGGCAGCA GATGAGATATTCCTTGCACCTGAGGTGAGAGAGTTCAGACGATTTTCTGAAAAGAGCGATGTATACAGCTATGGCGTATT TTTGCTTGAATTGTTGAGTGGGAAGGAAGCAACAGAATCACCCTCTCCGGACTCCAATCTAAATCTGGTTGAATGGGTTC TAAGAAATCAAGACCGCCACCTTATGTCCAAAATCATTGATAGGAGATTGGAGAGTAGTTTCACAGCTGAAGGCATGGAA GCTTACATCCTGCTTGTAATCAGATGCTTGGATCTTTCGAGCGAAAGACGACCCGCCATGAGCTATGTGGAAACGGAACT TGATAGAATCCTGGAGAAAGAAATGAACTTGACAACAATCATGGGTGAAGGAACCCCAACTGTGACTCTTGGAAGTCAGT TATTCAAAGCAACTAAATAA
Protein sequence (LotjaGi1g1v0634600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSSSLAAILGGAAGGAVALVGISIILLWFCLCRQRSVSRTSETGSSDPSQGRHGAIELQIRDTRRFAMEELSLATKNFND RNLIGQGKFGEVYNGLLQDGVLVAIKKRFGTPSQEFVDEVRYLSSIQHRNIVTLIGYCQENNLQFLIYEYVPNGSVSSHL YGAGQQSQEKLEFKLRLSIAQGAAKGLAHIHSLSPRLVHKDFKTANVLVDENFIAKVADAGLKHFLGRVDIAGSSSQVAA DEIFLAPEVREFRRFSEKSDVYSYGVFLLELLSGKEATESPSPDSNLNLVEWVLRNQDRHLMSKIIDRRLESSFTAEGME AYILLVIRCLDLSSERRPAMSYVETELDRILEKEMNLTTIMGEGTPTVTLGSQLFKATK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
Phobius | 1 | 5 | 5 | - | – | |
Phobius | 6 | 31 | 26 | - | – | |
TMHMM | 7 | 29 | 23 | - | – | |
PANTHER | 23 | 354 | 332 | 4.4E-117 | – | |
PANTHER | 23 | 354 | 332 | 4.4E-117 | – | |
Phobius | 32 | 379 | 348 | - | – | |
Gene3D | 50 | 150 | 101 | 1.9E-29 | – | |
SUPERFAMILY | 59 | 344 | 286 | 6.29E-62 | ||
ProSiteProfiles | 78 | 351 | 274 | 32.697 | ||
Pfam | 82 | 346 | 265 | 1.9E-40 | ||
ProSitePatterns | 84 | 107 | 24 | - | ||
Gene3D | 151 | 364 | 214 | 1.3E-43 | – | |
ProSitePatterns | 197 | 209 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi1g1v0634600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…