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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0658100 |
| Transcript ID | LotjaGi1g1v0658100.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein NRT1/ PTR FAMILY 1.1; TAIR: AT1G68570.2 Major facilitator superfamily protein; Swiss-Prot: sp|Q9SX20|PTR18_ARATH Protein NRT1/ PTR FAMILY 3.1; TrEMBL-Plants: tr|K7KEL8|K7KEL8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0658100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:121873282..121877195) extracted from Lotus japonicus Gifu genome v1.2.
GGCTTTTATAATTATTTTTTAATTAAAAAATTAAATGATGTGGATAATAAAAATTAAATTAAAATAAAAAGTATTAATTA AAAATAAAAAAATCATCTAAAAACCATACTTCCTAACTAGAAGATTTTAATCTTAAATAAACACCAACAACCGAAATTTG TTTCTTAATCAAATATTGCAAAAATTGCTCTGTTTATCAACCATAGTGTGAAACTCACGAACAAACCAAAACAAATTCCC TCCCCTCTTAACACAAAAATTAGTCTACAAACATGTCAAAGTTTTAAACTTTTCAACATTAAATCACCAAGAAATATGCA CAACCACAAATTTTGAGCACAACCACGAACTGTCGTCACTGAGGAAGCAGGAGTGTGAGAAGAGGAGTGAAATAAGAACC CAGGAAACCCAAAAATAAGAACCCATAAACTCCTAAATGGAAAAATCTCCAGATACATCTTATTCTGTAGCATCAAGAAG AGGCTCATGAAAAACCCAGATCGTGGATGGTAACAAAGCAGAGGTTCATGATAAACCCAGATCTAACCACCGTCGGCGAA GCCCAATCTGTTTCTAAGGCGCATCCATGGCTGCTCTAATCCTCGGCGATCTATCTCCTCTATGGTCTCGATCTTTTCCT CTTCTCTCAAACTCATCCATGGCCGTTTTGCTTCAACCCTTGAGTTTTGGACTTTTGTGTTTCAGGGGTGAAGTGGTTGG AGTTGGCTAGGGATTTGGGTTGGGGTGTGCTAGTTCGATTTGGGGATTTGGATTAAGAGCCTGAATCGTGATCTGGGGTC TGGTACGCCGTCGATGCTCAGGCCTTCACAATTCACGGTTCTCTCTTTCCATGGTCAGGTTCTAGAGAATGGAGATATTT GAGGTGGGGGTTACGATTTTGTGGGTTTTGAAAGTCATTGATTTTGCGGGTTACGTGTTCTGGTGGTTGTGGGATTGGCT CTGAAATTAGATTTCTGGAGGTGGAGGATGAAGGATATGTAGATGATGAACGTGATCTGAAGATGAAGAGAATGAAGATC GTGATTGTGAATTTCAAGATTTTGTGGGTTTTAATTGTGTGATTAGATGGGTTTTCTCCTTCATCTTCCTCTGTTTTGGG TTTGGGTTTGGTGAGGTTGATAGATTGTGTTTGGAATTTGTTATTTAGTTTAGGTAATTATTTAGTTAGTTTTGGAAAGT TTAGGTAATTATTTAGTTAGTTTTGGAATTAGACTAGGGATTTTATTTAAATTTGGGATTTTATGAAGTTTTTAATTTTT TTTCTGCTTAAATAACTGAGTTGGAATAAAAAAAATAAAGTTTTCTTATTTTTTAATTAAAAAAAAATTAAAAATGCCAA GTGGAAACGGTGACTAGGACAAAATTGAGCTGTGGCAGCATTTGGCCTTAATTGAATTAAAAAAAATTTCTTAGGGACCC AATTTGATGCAAAATTTTTCTAGGTCCTGGATTTGATTCCCTTTGTAATTTCAGGGGCCTTTGGACCCTTTAAGCCAAAA AAAAAATATGGACCAAAAAAGATGCAAAAACAAAATCAGGGACAAATTTAGATTTACCCCTATATTTTAAGGACTAGAAA CGTATTTAAACCGTAAAATTATCATATTTGAAGTTAATCAGATTATTCAGAAGTATCAAATCCAAAATTCTTTGCATTTT CCATTTTAGCTCACCATATTGCATATATTTCATCCCAATTATTTTGTCACACTCTTGCTTGATTTATCACAGGGAATGAT CAGTGTAACACTATCAACCATACTTCCACATTTGCGCCCCCCACCATGCCCAACTCAAGTGAATTGCCAAGAAGCCACAT CCTCACAGCTATCCATATTCTACATCTCTCTCGTTCTTATATCCCTTGGATCTGGTGGCATAAGACCTTGTGTTGTGCCT TACTTAGGAGACCAATTTGACATGACAAAAAATGGTGTGGCATCTAGGAAGTGGAACATCTTCAATTGGTACTTCTTCTT CTTGGGATTTGCCTCTCTAAGTGCTTTGACCATTGTGGTTTACATTCAAGACAACACTGGCTGGGGCTGGGGTTTTGGAA TACCAACTATTGTCATGTTCATATCCATCATTGCCTTTGTGTTGGGCTCACCATTTTATAAGAATGTGAAGCCAGACGGG AGCCCTTTGGTTCGTTTGGCACAAGTGATTGTGGCGGCTATAAAGAAGAGGAATGTGGTCTTACCAGACAATCCCAATCT TTTGTACCAAAATAGGGAGCTTGATGCTACTATTTCCTTGGAAGGAAGGCTTTTACACACAGATCAGTATAAGTAAGTCA TTTATATATGGTTTCTTTTGACTCAAAACAAACTATGAAACTTCAAACAAACTGCAGGTAATCACTTAAAAAAAGCAGTA AATAGTCACTTTAGTGTCTGAAGGTACTTTCGTACCTCACTAAGGAAATAGACAAAATAACTTCTAAAATATAAAACCAA AATAACTTCTGCAGCTTTTTCGTTTTTTGAGGAGCAGTTTTCCCTATTTCCATCTATTGGAGACTAAATTGACCGTCGTC GTAAGCGTCACTATTTTGTTACTCATTGAAAAAGTCAATTTGACATATTGATTTATACTATAGTTCCATTATTATTGGAC AAAATGACCATCAAAATGACTATTTACTACTATGAATATGAGCTTACCAAGCTAATAAACAATTTCACTTTAGTTGCATG AACTGCTACAAGAACAGGAATATTGTGCCATTTCCTAATTTAGCTGCTAATGGGTTGAGTTTTCATTTGAACACTGAACA TTACTTCATTGTGAGTTACATCTGCAGATGGTTGGACAAGGCAGCAATTGTCACAGAAGAAGAGACCAGAGACCCAAATG CAGCACCAAATTTATGGAAACTAGCCACTGTCCACAGAGTTGAGGAGCTAAAATCCATCATCAGAATCCTCCCAATCAGT GCAACAGGAATATTACTCATTGCTGGTTCATCACATCTACCTAGCTTCGTCATTCAACAAGCTCGCACGATGGACCGCCA CCTCTCTCACTCATTCCAAATCTCCCCTGCCAACATGTCTGTCTTCAGTGTCCTAACCATGATGTCAGGACTAATTCTCT ACGAACGCCTCTTTGTTCCGCTCGCTCGAAGATTCACAGGGAACCCGTCCGGGATCACATGCTTACAGAGAATGGGAATA GGCTTTGTGATTAACATCTTAGCCACAGCAATTTCAGCACCAGTGGAAATCAGAAGGAAAGAAATTGCTGCAAAGTACAA TTTACTTGATGATGTTAAAGCCACTATTCCTATTAGTGTGTTCTGGTTGGCGCCTCAGTATTGTTTACATGGATTGGCTG ATGTTTTTATGTCTGTTGGGCTTTTTGAGTTTCTGTTTGATCAAGCACCTGAAAGCATGAGAAGTAGTGCTACAGCTATA TACTGCATAATTATAGCTATTGGGAGCTATGCTGGTACATTCATAGTGTCACTTGTTCATAAGTATAGTGGAAAGGATGA AAGGAACTGGTTACCTGATAGGAACCTCAATAGGGGAAGATTGGAGTGCTATTACTGGCTTGTTAGTGGGATTCAAGTTC TGAATCTTGTTTATTATGGAGTATGTGTTTGGTTTTACACTTACAAGCCCTTGGAAGAAGTTGCTGAAGTGATGAACAAG GAAGAGGACTTGGAAGAGGTCAATACTAAAATCTCATGTGTCAAATTGAAACATGATGGGATGGATGATGAATAAGGAGC TTTCACAAAATCAATGTATTTATGTTCATGTTCAAAGTGACTGATTTTCATTCTTGGACTCTTTGAAACTCATTTTCCTC AATAGGATTTTATCACATCAATTAAAAATGAATGAAATATCACTGTTTCATCAGATTTAACAGCCTTATATTTC
CDS sequence (LotjaGi1g1v0658100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATCAGTGTAACACTATCAACCATACTTCCACATTTGCGCCCCCCACCATGCCCAACTCAAGTGAATTGCCAAGAAGC CACATCCTCACAGCTATCCATATTCTACATCTCTCTCGTTCTTATATCCCTTGGATCTGGTGGCATAAGACCTTGTGTTG TGCCTTACTTAGGAGACCAATTTGACATGACAAAAAATGGTGTGGCATCTAGGAAGTGGAACATCTTCAATTGGTACTTC TTCTTCTTGGGATTTGCCTCTCTAAGTGCTTTGACCATTGTGGTTTACATTCAAGACAACACTGGCTGGGGCTGGGGTTT TGGAATACCAACTATTGTCATGTTCATATCCATCATTGCCTTTGTGTTGGGCTCACCATTTTATAAGAATGTGAAGCCAG ACGGGAGCCCTTTGGTTCGTTTGGCACAAGTGATTGTGGCGGCTATAAAGAAGAGGAATGTGGTCTTACCAGACAATCCC AATCTTTTGTACCAAAATAGGGAGCTTGATGCTACTATTTCCTTGGAAGGAAGGCTTTTACACACAGATCAGTATAAATG GTTGGACAAGGCAGCAATTGTCACAGAAGAAGAGACCAGAGACCCAAATGCAGCACCAAATTTATGGAAACTAGCCACTG TCCACAGAGTTGAGGAGCTAAAATCCATCATCAGAATCCTCCCAATCAGTGCAACAGGAATATTACTCATTGCTGGTTCA TCACATCTACCTAGCTTCGTCATTCAACAAGCTCGCACGATGGACCGCCACCTCTCTCACTCATTCCAAATCTCCCCTGC CAACATGTCTGTCTTCAGTGTCCTAACCATGATGTCAGGACTAATTCTCTACGAACGCCTCTTTGTTCCGCTCGCTCGAA GATTCACAGGGAACCCGTCCGGGATCACATGCTTACAGAGAATGGGAATAGGCTTTGTGATTAACATCTTAGCCACAGCA ATTTCAGCACCAGTGGAAATCAGAAGGAAAGAAATTGCTGCAAAGTACAATTTACTTGATGATGTTAAAGCCACTATTCC TATTAGTGTGTTCTGGTTGGCGCCTCAGTATTGTTTACATGGATTGGCTGATGTTTTTATGTCTGTTGGGCTTTTTGAGT TTCTGTTTGATCAAGCACCTGAAAGCATGAGAAGTAGTGCTACAGCTATATACTGCATAATTATAGCTATTGGGAGCTAT GCTGGTACATTCATAGTGTCACTTGTTCATAAGTATAGTGGAAAGGATGAAAGGAACTGGTTACCTGATAGGAACCTCAA TAGGGGAAGATTGGAGTGCTATTACTGGCTTGTTAGTGGGATTCAAGTTCTGAATCTTGTTTATTATGGAGTATGTGTTT GGTTTTACACTTACAAGCCCTTGGAAGAAGTTGCTGAAGTGATGAACAAGGAAGAGGACTTGGAAGAGGTCAATACTAAA ATCTCATGTGTCAAATTGAAACATGATGGGATGGATGATGAATAA
Protein sequence (LotjaGi1g1v0658100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MISVTLSTILPHLRPPPCPTQVNCQEATSSQLSIFYISLVLISLGSGGIRPCVVPYLGDQFDMTKNGVASRKWNIFNWYF FFLGFASLSALTIVVYIQDNTGWGWGFGIPTIVMFISIIAFVLGSPFYKNVKPDGSPLVRLAQVIVAAIKKRNVVLPDNP NLLYQNRELDATISLEGRLLHTDQYKWLDKAAIVTEEETRDPNAAPNLWKLATVHRVEELKSIIRILPISATGILLIAGS SHLPSFVIQQARTMDRHLSHSFQISPANMSVFSVLTMMSGLILYERLFVPLARRFTGNPSGITCLQRMGIGFVINILATA ISAPVEIRRKEIAAKYNLLDDVKATIPISVFWLAPQYCLHGLADVFMSVGLFEFLFDQAPESMRSSATAIYCIIIAIGSY AGTFIVSLVHKYSGKDERNWLPDRNLNRGRLECYYWLVSGIQVLNLVYYGVCVWFYTYKPLEEVAEVMNKEEDLEEVNTK ISCVKLKHDGMDDE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | 1 | 455 | 455 | 3.39605E-180 | – | |
| Phobius | 1 | 1 | 1 | - | – | |
| Phobius | 1 | 24 | 24 | - | – | |
| PANTHER | 1 | 482 | 482 | 9.1E-292 | – | |
| PANTHER | 1 | 482 | 482 | 9.1E-292 | ||
| Pfam | 2 | 420 | 419 | 5.1E-85 | ||
| Phobius | 2 | 13 | 12 | - | – | |
| Phobius | 14 | 24 | 11 | - | – | |
| Phobius | 25 | 33 | 9 | - | – | |
| SUPERFAMILY | 29 | 466 | 438 | 1.44E-19 | ||
| TMHMM | 32 | 54 | 23 | - | – | |
| Phobius | 34 | 57 | 24 | - | – | |
| Phobius | 58 | 77 | 20 | - | – | |
| TMHMM | 75 | 97 | 23 | - | – | |
| Phobius | 78 | 97 | 20 | - | – | |
| Phobius | 98 | 102 | 5 | - | – | |
| TMHMM | 102 | 124 | 23 | - | – | |
| Phobius | 103 | 123 | 21 | - | – | |
| Phobius | 124 | 225 | 102 | - | – | |
| Phobius | 226 | 247 | 22 | - | – | |
| TMHMM | 226 | 248 | 23 | - | – | |
| Phobius | 248 | 266 | 19 | - | – | |
| TMHMM | 263 | 285 | 23 | - | – | |
| Phobius | 267 | 284 | 18 | - | – | |
| Phobius | 285 | 356 | 72 | - | – | |
| TMHMM | 350 | 372 | 23 | - | – | |
| Phobius | 357 | 376 | 20 | - | – | |
| Phobius | 377 | 387 | 11 | - | – | |
| TMHMM | 387 | 409 | 23 | - | – | |
| Phobius | 388 | 412 | 25 | - | – | |
| Phobius | 413 | 432 | 20 | - | – | |
| Phobius | 433 | 456 | 24 | - | – | |
| TMHMM | 436 | 458 | 23 | - | – | |
| Phobius | 457 | 494 | 38 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi1g1v0658100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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