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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0665800 |
| Transcript ID | LotjaGi1g1v0665800.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Fission 1 protein; TAIR: AT3G57090.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|Q9M1J1|FIS1A_ARATH Mitochondrial fission 1 protein A; TrEMBL-Plants: tr|I3SLN5|I3SLN5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0665800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:122788451..122790798) extracted from Lotus japonicus Gifu genome v1.2.
ATGGATGCCAAGATCGGAAGTCTCTTCGAGTCCATCGGAAACTTCTTCTCCGGCGGCGATCAGATCCCTTGGTGCGACCG CGATGTCATCGCTGTAAAACCCCTCTCTTCATTTCCCTGTTCTTTCTCCTATCAATCTCAAATCCATGTTTTATTCTTTG TTTTTGGTATTTCAAAACCCTAATTTTGTACTCAGAACTTCGAATTTCTCGGAATTGTTAACCCTAATTGATAGGGAATC CAAATATTGTCGCAAAATGGAAGAAATTTCGTGAAAATGATTGTATTTTTACGGTAAAATGGAAGAAATTTCATGATGGT AATGGTTAGGGTTTGTGCTTGCTGTAAGAACATGGTTGTATAGGGTATTTTGTTTTTCCTGCTATCTGCATTGGTTCCTT CAATCTGAAGTGTTTTGCATGTTTTGAAGGGATGTGAGAGAGAAGTTGCAGAGGCTTCTAATGGTGAGTCTGAGGAGCGG AAGCATGAGAGCATAATGAGGTTGTCATGGGCACTTGTTCATTCAAGGGAAAAGGAAGATGTTCAGCGCGGGATCGCCAT GCTTGAGAGTACTATTGCTATACTTTACCTTACAGAATAAGTTTCAGTGCTTTAGGTTGAAATGGAATTGGGATATGCTA ACAGTTGCTTTATGTAGAGTTAGTTATGGTTTAGCCTTTTGAAACTAGCTTTTATAAGCATTTGAGAAACAGTTATATTC TGTTTTTATGAAATCAGATAATTGTATTTTTATGAAATCCTAATATTCACTCACATATGACTGCTAACTCAGATTTCTAT GCCCATTATCCTAAAAGTAATGTAATTTGCTCAGAACATAAACAATCCAATGTGAGTTGTTTGATTACTCTGCTAGCCTG AGTGAAGAATTGGAAATTCACCATAATAGCATAGGCATGGCTAGATTGGCCTTCAAAATCTCTCTAGAGTTGCCATGGGG ACATTGTGACTTTTATGTGATTATCATACAAACTTCAATGCAAGACGGTAAATTTATTAAACTTGCTTTTAGGAGGCAAA TCTATTTAATTGTGGCTTTAAGGTCTCTCAAATTTCCTGTGGCTATTTTCATTTGCTGCATATGAATATCACTGAAAATA TTGTTCCGTGGTTAATCCTTCCTTGAGCAATGCAAGTTGGATTTCTTCTATGAAAAAGCTGCATATTTAAGCATTTTAAC TTCCTTTTCCGCAAGGTAGCATGAGCTTCCTGTGTCACTGAATTTAGGCCACTGCCACTACAATCACAGCTCCTTCCTTT CTTTCTATTGTTTTTGGTATATAACCTTAAGTAGAGATGTTCGATATGGAAGTATTCTTACCTTTAAAGGTGTGGTTAAC CTTGTACATTTTTAATTATTATTCACAGCTTCACTGGGCAATGATAAAAGTCCTTTGCAACAACGTGAGAAGCTTTATCT TCTGGCTGTTGGATACTACAGGAGTAATGATTATGGTAGGAGTCGGGAGCTTCTGGAGCAATGTTTAGAGGTCTTGCTTT CTCACTTATTGATTGTAGCTTGAAACTCTATTTTTCTTGCTTTGTCCGTTGCCGGATTGTCACTTCATATGATATTCTCT TGTTTGTTGATACTTATGCTCAAAAGCTCTATGTTTGAATTTTGGTTTGTGTTGTCTGCTGGTAGCCTAGAAATATTTAG ATCCATTTTATCCTTATAAATTATCCAGTATACACTGTTCTGATTCTAAGCTAGGAGATTCTCTTTTTTTCAAGTTAATT TCTTTTCATTTAGTCAATAGTTATCTATGTTTTTTGTTCTCTAATATGGAAGTTTTATTCTATTGTTTGCAAATTAGTGG GGTTATATGAGTCCTTGATTAATCTTTGATTTTGATCCACGATTAATGACATCATACTATCTGTTGAAAGTCTTCATGAA CGCTTTCTTGAAATACTGATAGCTTGAAGCATCTTAAAATTAAGATTGGGTCATATTTAAACCTTATCGTAATCATATAA AAATTTGACCACAATGACCTATTTTGGATAGTGTATACGCATTCTTGGTCTAGCATGACTGAGTTACTCTGCTTTTCTTT CTCTCTAAATATCGTCTGGATCTTTTGCCCTTTGCAGATTGCACCTGATTGGAGGCAGGCACGGTCCCTCAAGAAAGCAG TTGAAGATCGGATTGCTAAAGGTAATAACTTATTTCTTGAGCTCTTATCACATCATCATAACAGTAACTAAAGGGTTGCA AATGTCATGTGTATCAATGCAGATGGTGTTATAGGAATTGGCATCACTGCAACAGCAGTGGGACTAATAGTTGGCGGCAT TGCTGCAGCATTGGCCCGGAAGAATTGA
CDS sequence (LotjaGi1g1v0665800.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATGCCAAGATCGGAAGTCTCTTCGAGTCCATCGGAAACTTCTTCTCCGGCGGCGATCAGATCCCTTGGTGCGACCG CGATGTCATCGCTAACTTCGATGTTTTGCATGTTTTGAAGGGATGTGAGAGAGAAGTTGCAGAGGCTTCTAATGGTGAGT CTGAGGAGCGGAAGCATGAGAGCATAATGAGGTTGTCATGGGCACTTGTTCATTCAAGGGAAAAGGAAGATGTTCAGCGC GGGATCGCCATGCTTGAGACTTCACTGGGCAATGATAAAAGTCCTTTGCAACAACGTGAGAAGCTTTATCTTCTGGCTGT TGGATACTACAGGAGTAATGATTATGGTAGGAGTCGGGAGCTTCTGGAGCAATGTTTAGAGATTGCACCTGATTGGAGGC AGGCACGGTCCCTCAAGAAAGCAGTTGAAGATCGGATTGCTAAAGATGGTGTTATAGGAATTGGCATCACTGCAACAGCA GTGGGACTAATAGTTGGCGGCATTGCTGCAGCATTGGCCCGGAAGAATTGA
Protein sequence (LotjaGi1g1v0665800.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDAKIGSLFESIGNFFSGGDQIPWCDRDVIANFDVLHVLKGCEREVAEASNGESEERKHESIMRLSWALVHSREKEDVQR GIAMLETSLGNDKSPLQQREKLYLLAVGYYRSNDYGRSRELLEQCLEIAPDWRQARSLKKAVEDRIAKDGVIGIGITATA VGLIVGGIAAALARKN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 176 | 176 | 7.6E-94 | – | |
| PANTHER | 1 | 176 | 176 | 7.6E-94 | ||
| Phobius | 1 | 149 | 149 | - | – | |
| SUPERFAMILY | 10 | 175 | 166 | 1.49E-39 | ||
| Gene3D | 36 | 175 | 140 | 7.0E-39 | ||
| CDD | 40 | 150 | 111 | 2.02199E-36 | ||
| Pfam | 61 | 88 | 28 | 4.7E-10 | ||
| Pfam | 99 | 151 | 53 | 8.7E-21 | ||
| Phobius | 150 | 173 | 24 | - | – | |
| TMHMM | 151 | 173 | 23 | - | – | |
| Coils | 172 | 176 | 5 | - | – | |
| Phobius | 174 | 176 | 3 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Mitochondrial fission | The division of a mitochondrion within a cell to form two or more separate mitochondrial compartments. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0665800.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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