Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
Field | Value |
---|---|
Gene ID | LotjaGi1g1v0672600 |
Transcript ID | LotjaGi1g1v0672600.2 |
Related isoforms 2 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Pentatricopeptide repeat-containing protein; TAIR: AT5G01110.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110; TrEMBL-Plants: tr|A0A0R0JD32|A0A0R0JD32_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0672600 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:123747936..123757536) extracted from Lotus japonicus Gifu genome v1.2.
CATAGGGGCCCAAACCCAACTCCCATCACCAAACCAGTGTTCCAATCCAACCTCACCGCACGTTGTACTGTGTCTGTGTC ACTCTTCCACTGCTCCGAATGTCAGCTAACCTTCCTCTCCTCTTTCTCCTGAGGCAGAGGCACCACCATTCTTTCAATCT CCTCACTCTCTTCTCCTTCTCTCGCTCCCTCCATTCTCCTCCTTCACCCTCCCATTGCTACCATTATTTGACCCAGTTTC TCCCATCTGGGTCACCCAATTTCAACCCCCTCACCGTAATCACCCCCAGGGAACGCCGCCTCGTGGTGGTGGGACTAACC CACATCGTGAAAAGCGATAACGCTTTCATCTTGAAGGCATTCTCCCTCCGTTTCTATCCACTCTTCCTCGCCAAGATCAT GGAGCTGTTGCAGACCCGGGAAGCCGCATTTGCATTCTTCAAATTGGCATTCGAGGGTGAGGGTGGTGGTGGTGGTCATG ATTCAGAGGAGCTTGTTCGGTCGTGCTGCGAGGCGGCGCATGTTCTGGCAGCTCATGACCTCCAGCTGCAGGCCCAGGAT GTGGTTTCGTGGATTTTCGCGAGAATCGGTGCTGGTCGAAGCAAGGAGGTTGTGAAGTTCATGTGGCAGAATCACAATGA GTATGAGTCTGATTTTTCTGTCTTGAATACGTTAATGCGGGGTTTTTTGAATGTGGGCATGATTTTTGAGGCATTGGATG TTTTGCATAGGATGAGGGATGTAGGAGTAAGGCCAAGCTTATCTGCAATTACTATTCTTTTTAGGTTGTTGCTTAGGGTT GGTGATTATGGCAGTGTGTGGAAGTTGTTTAAAGATATGCTCCGTAAAGGGCCTCGACCTTCAAGCGTCACGTTTAATGT GATGATTTGTGGGTTTTGTAGACAGCAGGGGCTTGTTGTAGGGGAGAGTTTGTTGCATTTGATGCCCAAGTTTGGGTGTG ATCCGGATGCTTTCACATATAACATTCTTATTAATGCTTACTGCATTAAGGGGAAGACTTCGGTTGCGATGGATTGGCTG AATATGATGATGAAAAACGGTTGTGAGCCGAGCATGGCCACGTTTAGTACCATCACGCATGCTCTTTGCAGGGAAGGAAA CGTGATAGAGGCAAGGAAGGTTTTTGATAGAATTCAGGATATGGGTATTGCTCCAAATACTACAATATACAACACGCTGA TGGATGGATATGTGAAGGCGAGGGAGATTGGTCAAGCTAACATGCTTTATGAAGAAATGAGGGGGAAAGGTGTTTCTCCT GATTGTGTGACTTTCAACATTCTTGTTGGGGGGCATTATAAGTATGGGAGAAATGGGGAATGGAACAGGTTGTTAAAAGA TTTTATAGTAACAGGATTTTTCCCTGATTCTTCACTATATGATGTATCAATATCGTGGCTATGTTGGGCTGGTAGACTAG ATGAGGCCATGAAATTATTACAAGATGTACTTGAAAAGGGACTAACTCTTAGTGTGGTTGCCTTTAACTCATTAATAGGA GCCTATAGCAGGGCAGGTTTAGAAGACAAAGCTTTTGAAGCCTATCATATTTTGGTTAAATGTGGTTTTACTCCTTCATC GTCCACGTGCAATTCTTTGCTTATGGGTTTGTGTAGGAAGGGGAGGCTGCAAGAAGCCAGGATACTTTTGTATAGGATGT TAGAGAAAGGGTTTGCCATCAACAAAGTGGCCTACACTCTGCTTTTTGATGGATATTTCAAGATGAACAATCTGGATGGG GCTCTAAATCTCTGGAAGGAAATGGAAGAAAGAGGAATATATCCAGATGTTGTTGCCTTTACAGCCTTCATAGATGGACT TTCAAAAGCAGGTTATGTTGAGGAGGCGTATGAAAAGTTTGTAAAAATGTCAGCTATCGGTTTTGTTCCTAATAATTTTG CATATAATTCTTTGATTGGTGGGTATTGCAACTGTGGGAAGATGCCTGAAGCATTGAAGTTGGAGAAAGAGATGAGGCTA AAAGGCCTTTTTCCCGACACCTTTACCTTCAATATCATCATTGATGGGTTTTGTAGACAAGGAGAAATGAAATCTGCAAT TGACGAATTTCATCGCATGCACCAGATTGGTTTGATGCCAGATATATTCACATTTAACATATTAGTTGGTGGATACTGTA AGGCATTTGACATGGTTGGTGCAGTTGAGGTTGTTAATAAAATGTTCACATGTGGGCTTGATCCAGATATCACAACCTAT AATACACACTTGCATGGTTACTACCTTGCTCATAAAACGAATCGCGCAGTTATGATTTTGAATGAGCTTGTCTCTGCTGG TTTTGTTCCTAACACAGTGACATACAACATTATGATAAATGGTATTTGTAGTGATATTTTGGATCGTGCTTTGATTCTGA CTGCAAAGTTACTTAAGATGGGTTTTATTCCAAATGTGGCTACAACCAATATATTGTTGTCTCACTTTTGCAAGCAAGGG ATGCCAGAGAGGGCCTTACAATGGGGTCAAAAGCTTAGGGAGATTTGTTTTGGTTTTGATGAAATCTCCTATAAAATACT GGACAGAGCTGACCATATGGTGCAGGATGATGTTGAACTTGTGAGAGGAACATATGAAAAGGGCCTTTTTTTGGATTTCC TAATGTACATTACATTTGATTATTTTTCAAGAAATAGAATTCATAACATAGAGACTGAGAATAGTCTAAGGTTGATTGAA AGTCAATTTGTTGCTTTATGAACTCGATTGCTACTTGAGCTATTGCACCAAAAAGTGGTTACAAAATGTTACATGGCACA AACTGTAAGAAACCAGGGAAGGATTGGCTACCTTTTTACCAGTCTGGAGTGCTGTTATGTGTATTTCTCAATGAAGGGAA ATAACAGCTATCCTTTTAAAGGACTGCAGGGGAAGGATAGTTTTGCTTCTGAGATTTTGAGACCTCAATAACGCAATCAG TCCGAAATGTGGCTGAAGCTGCTGAAGTGCAGGTAATGAAGAATGTTCTGTAAGTAATTAAATCTGTATACTGTTGAAAA GTCTATGATATCAAATCCTGCTCCTTCCACCTGTTTTTAGTATGTGCTTCTTAGGCTTTATGACCCACTGGGAAGACTTA GGATTGATTAAGATAGTTTTTTTAGAAGAGGGAGGTGGGAATTTATTTAGCATGCTTGAAATGAAGTTATTGTGGTTGCA TTGATTTGGCATTGAACGATAAGGTACAAATCCCCTAAAAACTTAAGTTATAAGAAGAAAGCCTAACTATATTTCTAACA AATATTATGGGGGATCTCAAGTGTCTGACTGAAAAATTGCAAATACTTACAAAAAAATTGTTGATTTCTCATGTTAATAG TGTTTGGCATGGCAGGAAACTATTGCTATGAAACTTAATGTTCAACAGCTGTAATCTTTCATTGTATGAGAAACTGAGCA AATTTGGTTTGCTTCTTTATGATTTATGATTCTTGGTGAGGAAAAAAATTAGCGGGGAAATTACAGAACAGAATTTGGGA AAACAAACAAATGATTATGAGGTAGTTTTTATGGTGTCCCCCCCCCCCCATGTAATCTGTTAATATACACACACCATTGT TTGGTACATTTATTTTACCAATATATTAAAAAAAGGCAATTGTGAGAGAAAGATTTATTGTTTATAGTGCTTTTACATTT CTGCTATTCTTGCAATACTGGCAATGCTATTCTCAGCCTTCAGTCTTGAAACTACACAAATGTGTGCGGTTTTTAGTACT ACCCTATAGGGTCATGAGAAAGAATATGGCCTCACCACTTTCAGTTGCCTTATCCCTTAAATTGGCACTACTACTACTAC TACTACTGCTGCTACAGTGCTACTACCCTATACATTAGTATGAGCTTAGGTTAGTTCAATTTCCAAAATATATTGGGATC TATCATTCATGGATCTCAGAATCAGGAATTAGCTGTTGACAAAAGATCTTGTCGTGTTTAATTTGTAGCTTATGTTTCTT GACAAAATTAGGAATATCAAATTGAACATTTCATACGTCGAAGTGAAATTTTCAATCGATTAAAACTATCATAATGATGG CCCAAGATATAAATTAGAACTAAGTTTGGCTCTTGGCTTTCTACATTTCAGATATATGAAGACAAGGTGGCGGAGAAAAA TGAGGCGGATGCCAAGGCAATAATTTTGATGCTCATAAGAGGAGAGAACATCAAAAGATTGATTGTTATGAGACAGAAAA GGTAGAAGCAAGAGAAAATGAGCTGGACTCCGAGGAAATGCTGAACGATTGGGACTTGAGCGGATGGCTACAGGCTATCC TAATGTTGTATAATCTTAAATAAGCAGAACAAGATGGAGACTTCAGTTTGAGAATCTTGAATACAAAAGCAAAGATGAAG AAGTGGTTCAGTGTTTATCAGTGAAAAAATGAGCTACCCCTACCATTAGGCGGAAATATGTTTTTGTTAAAGCTTTTGAT GTGGTTGAGAAACCTGATAAGGAGATAAATATGTTTCAGCCAGAAATGGAAATTTCACTCAATTATGAAGAAATAGGCTG CATTTCACATTTATAAAGTCATATTATTGGCAGGTAGAGTCATGAAGGAAAATGAAAATAATCTAAAAAATAAATAAATT AAAGATGTCAAAGTTGAAGGAAAAACTAAAACTCTTATTGTGCCTGTCCCTGAGGAGATACTCCAAGTCTATTAGTCAAT TGGCTATGACAGTCCATTTGGAGGAGTCAGGGTAGGTGCCTGAAAAAATAAGTCAACGATTTAGAACCTGTTTGGGTACT GGGTTGAAAGATCTTGAGCCCGTTTGGATGCGGATTAAGAGCACTTAGTGGAGCTTATCTAGTGCATTTTTTTAGTAGAG AAGCTCCAATAAGTGCTCTTTGGTCCGTATCCTAAAGGGCTCCTTGTCTACTGGAATAAGCACTTTTGAGAAGATCAGTG ATGTTTGGGTAACTCTATTTCATTAGCTTTTGACTTCTGAGAAGCTCTTAAAAAAGCTTATTTTGCAGCTCATTTTAACA GCTTCCCTTCTCAATTTGAGAAGCTGAACATAAAAACTAGTTGGACAAAATAACCTATCAAAGCTGCAAAGTTACAACTC CTGTCCCATTCTTACTCCATGTGTTGTAAGTTGTAACAAAGATGGCTCTCTGTAAACCCTAGCAAAGATCCTTGCGTCGC ATTGCCATTCACATAGTTGTTGGCTGCAAGAGGTTGCATTTCATCGCTTAATTACCTGAGATCCTACCAGGTTTGCGAAT TCCATCCTTCTTTCTCCATTTTGGCTGTTTCTCCATATCATCCATGGCACGCTGGTGAATTTGTGGTTCATTTTCAGGTC TCTTTACTGCTCTTGTTTTGATCTTTTTTCTCATATTATTGCTTTTCTTTGGAATCTCGATGTTGGAGTAGCTTGAATTG AAGGTAAAGATTTCTTGTAGTATTTAAGGTTTTGGATATTAATTTTTTCTAGTATTTTGTCTTTTTACTCCTATGAAGCA AGACCATGAATTAATTGAGTTTTTTCTTCTCTTTATTTGTCTAATTTTTCTTATTCTTAATTTTGAGATTCTCAATGCTG GGACTATTGATTGGGTAGGTACGTTCATTGTTTTTCTGGCCTCTAATCTCAAGATTTTTAGTTTTGTCCCTTTTAATAGT TCTGTTATGTTTCAAACCCGGTAAGAAAACAAAGCATAAGTTGCCTTTGTTAGGAGTGCAATGCGCCCCATAAATTTCTA AGGGCAAGTGTACCCTATCATAAGTGATACAAGACAAGGAGTCTCACATATAATTCCCTTAGGGATCACTAATGAGTACT CTTTAAGATTCTTATGCTATGCAAATAAACAGAATACTGTTGAGAATAAGATAGAGAATACTAGGGGGCAAGAATTAAGA AAACAATGAGAAAACTAACAATATCCAAGAAGTTACTTACTATTAACTCTGAAGCTCGGGCCTCATTGATGTGGATTCTT TAAGCAACATATATCCTAGAATCAAAGGACAACCACTCCTACTTATGTTTTGTACCCTATGGCCGTGACTCAATTATAGT CTAAAACTCTTCTTTTTCTGCCTATTTGGTCTGTTAGTGTATTATACTGTAAGCTTTGTTAGTTTTGTATTTTCTGTTTA TGTTAGTTAGTGTCGGGCTGTATCTAAACTCTAGGGCCTAGGCGGTTGGTTACATTCTGTTTTTTCACAGCTCTCTATAG AAGAGCTGCTCTTTGTATTCTTGAATAATGAATTCAATTCACACATTTTATGTTACTCTAGTTTTCTCTTTCTCTCTCAA TACTGTTTTCTAATATGGTCCATAAAACAAAATTAGCAGAAATTTGCATTTAAGCCTTGAGGAGTTCATTAACTAAAGAA AATCCATTGTCAAAGTACAAGATCCACCCTCAGCCTCAGTTGAGCGATTAGTTCATCATGTTTGGTTCAATCAAGACAAT AAATTGAAATGCAAGTTCCATAAATATAATGATACAGGCAGAAAATAGAAGAATCTAAGAAATATTCCCTTCACTAAATT TTGGACTCGCTTCTCTTTAGAAGTATATCCTTAGATGTCTTTGTTCTCTCTATAGGGTTCCTTTAACATATGTCTTCGAA TTTAGTTTAGACCTCACTCTGCTCCAAAATCTAGCTTGTAAGGTGAGGATTGCCAAAACCTTTATAAGTTCTATGTTGGC CTTATCTCTAGTCGATGTGGGATCTCATCCCTCCCTCGCGCCCAGGAGTAGACATCTGGAGCGTGGAGATTATAGGTCTT TTTTTTATTGCTCTGGAAATCCGTGGGGCCAGGTTGATTGCACTGGAATATCCACGGGGCCAGGTAGATTGCACTGGGAA AGCCATGGGCCCTGGTTTTTTTTTCACAAGGGTGGGTGGCCAAATATCGGATCTAGGATCGACTCTGATACAAAGTTAAA TAAGAAAGAGTGTGAGACATTGGACTGAATTCGTGTGTCTCAACTACACATCGAGTGTATTAATAATAGGGTACGATAAA TACATTATATCATTGTTTCCCTATTTACAGTGATTGCGCTATCTAATTACAATTATTATAAGATGTCCTACCCATTTAGA TAAATATATCCTACCCATTTACATTATGTCTAACAAGTACAAAGCTTTGAGGTTCTTGTCATGAACCAACCAACTATCCC AAAAGCTGAAGCTATTGGGTGAAGGGGAAGGGCAAACCTGGTGCTATAAATCTCCCGCTATGTGCAAGGTCCACGGAGGG GCCGGACCCACTTTGTGGATCTAGTATAGGCAGCTTTTACATGACATTTTTGCAAGAGGCTGATTCCACTGCTCGAACCT ATGACCACAAAGTCACATGCCAGCAACCTTACCGTTTTGCTGAGGCTTGCCTTCTAAATAATTAGTTTTTGAAAACACAT GAATAATTCTATATTATATTTTTAACACATTATGATATAAGTAGTTTGTGTTGGTAGTCCATATATCATGACAATCGTGT ACTTTTTATTCTGTGTTGGTTCAAAAGATTAATAGCAGATAAGATGGAAATTGTGCATTTGCTTATAGTAGCTTTGTCTT GGAAACTCAATTTCCATTTACATATAATTGGGGCATTGCTGTTTGAAGCCATCCAAATTTCATCATGTAACCCAGCTTGA AATTTGCTTCTGGTTTAATGATGGTTACTACCTGTCTGTTGCTGTAATTTCCCTGCCTTTCTTCTTGTTCTTTACTTAAG TTGGAAGATGAGATCATTCTACTCTCCTTTCTTATTTTGGGATTGTTTAACATGTTCTTGACTGGCCTAAACCATCACGA ACCTGTTGCAGAACATTATGTTCTACACCAGATGTAAAGATACTCTTCAAACAGATTTTTGTTCAGAGAATTATCTCATT GTATAAATATTTTAAATCTGCTTACATCTATCTACTGGAATCCAGTGGTTAAAGGTCTAGAATCCATCTAGTTTAGCGGG AAGGAGTATCCGGATCAGCCAGTTCTTCATGCTAGTCTTGACTGGGTGATCTTCAATAATGTTCTTACATCAGACAGTTC TATGACAGCATTTTTAACAGAGTGGTATGTGAAATTATCTTAAATATTCCTTTTTTTTGGGGGGGGGGGTGCTTCTATCA CTTCTAACAGATCATTTATTGCATACAAAGAGGTTCGCCCTTAAGGGTGTGCTCAAACTCATTGGTGTTTGTTACATTAA GGTGTTGCCATTGCATCCAGTATTTTGCTGTTCTTATTATCTATGACTATAGTATTCTCAATGCCAAAAATACAGAATTA ACACATTCCATTGCTTTAGGTAGAATGATTATTGGAAGAGGTTTAGAATTAACACATTCCAATGCTTCCTTGAAATTTAA TAGAATGAGAAGGTATTTCTCTTTTAATGTATATCTTGTTTAGTGCAAGGGTTAGGTTATAGCCCATTGCCCTTTAATGT GTTGTGTAAAATACACCTAATAGGTTAATTGGTTAAAGCCAATCCTACTTTTTGATCATAACTGAGCAGGAGCTATATTT ATTAGTGAGGAATGTTAGATATTTCCATGATGCCATCGAAGGTGCTCATTTAACGTTGCCTCCATATGTGTTGGCAGTGC AATGTAATTTTTTGTATGGAATACCTGTACACACCATTCATATATTTCAAACAGTATTTTTTATATTTTTATGAATGAAA AATTTGTACTATTAAGCCAAATCAATGACAACTCTTACTTTTCATCTAAAAGCTAACACTGCTAAGTTAACGGTGAAGTT AAGAAAGTCTCTCCTGTAATTTCTTTGTTGTTTTTATGTTCCTTTCCCTTAAAAGAAGGAAAATTCAGTAGAGCACCAAG ATGTGAATTCTTCTCTTTAAGCCAAAGTCTCTTGTTCCAGTTAATTTGGTAGTTCAATTTGCAGTAACTCTTTTAAATCT GATTTGATAGGAATATTATGTTTGTTGGAGTTTTAAACTTTCTACTTTTTTTTGGTGAGCTTAAATGGGAATATCAAATG AAAAGTAAAAAGTTTGTAGCCAGCCTATGTTGTTGTTGACAGTGCCAGATTATCCACTTATTCTGTTTTTTTTTTTTTTA AGAAAAAGTTTGGGTGGGTTCAGCTCTGGCCACCACCACAGGTCAGGGCATATCTCCGGGACTATACGTTGCTTACAGAG ATACTTACCAATCGCTCACCAACACAACCCTCACATCGGCAGCAAAAATTGAGCACACAACCTCTTGAGGGGGAAGGAGT CCGTCTTTACCATCAGAGCCAGACATGTGTTGGCATTATTCATGTATTCTTTATATTATTTCTCTTTAACCAAATTTGCA GCTGTTTCATCAAAGTGATGACTGGTGAACAATATTGAGATCGATAATGCTTGTTCAGTGTTTGGAAATTTTCAGAATTT AAAATAAATCATTGTATAATCAAGCAGTCTTTAGTCTATAAACTTCTATAACTACTTTATAACTTTATATGATGTTCTCC TTTTATCTTAAAAAAGAGCTACATTCTCTGCATCCCTGACCCCCTTTTGATTCTTGTGATCTAGAGATATCTTTTCCCAA C
CDS sequence (LotjaGi1g1v0672600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCAGCTAACCTTCCTCTCCTCTTTCTCCTGAGGCAGAGGCACCACCATTCTTTCAATCTCCTCACTCTCTTCTCCTT CTCTCGCTCCCTCCATTCTCCTCCTTCACCCTCCCATTGCTACCATTATTTGACCCAGTTTCTCCCATCTGGGTCACCCA ATTTCAACCCCCTCACCGTAATCACCCCCAGGGAACGCCGCCTCGTGGTGGTGGGACTAACCCACATCGTGAAAAGCGAT AACGCTTTCATCTTGAAGGCATTCTCCCTCCGTTTCTATCCACTCTTCCTCGCCAAGATCATGGAGCTGTTGCAGACCCG GGAAGCCGCATTTGCATTCTTCAAATTGGCATTCGAGGGTGAGGGTGGTGGTGGTGGTCATGATTCAGAGGAGCTTGTTC GGTCGTGCTGCGAGGCGGCGCATGTTCTGGCAGCTCATGACCTCCAGCTGCAGGCCCAGGATGTGGTTTCGTGGATTTTC GCGAGAATCGGTGCTGGTCGAAGCAAGGAGGTTGTGAAGTTCATGTGGCAGAATCACAATGAGTATGAGTCTGATTTTTC TGTCTTGAATACGTTAATGCGGGGTTTTTTGAATGTGGGCATGATTTTTGAGGCATTGGATGTTTTGCATAGGATGAGGG ATGTAGGAGTAAGGCCAAGCTTATCTGCAATTACTATTCTTTTTAGGTTGTTGCTTAGGGTTGGTGATTATGGCAGTGTG TGGAAGTTGTTTAAAGATATGCTCCGTAAAGGGCCTCGACCTTCAAGCGTCACGTTTAATGTGATGATTTGTGGGTTTTG TAGACAGCAGGGGCTTGTTGTAGGGGAGAGTTTGTTGCATTTGATGCCCAAGTTTGGGTGTGATCCGGATGCTTTCACAT ATAACATTCTTATTAATGCTTACTGCATTAAGGGGAAGACTTCGGTTGCGATGGATTGGCTGAATATGATGATGAAAAAC GGTTGTGAGCCGAGCATGGCCACGTTTAGTACCATCACGCATGCTCTTTGCAGGGAAGGAAACGTGATAGAGGCAAGGAA GGTTTTTGATAGAATTCAGGATATGGGTATTGCTCCAAATACTACAATATACAACACGCTGATGGATGGATATGTGAAGG CGAGGGAGATTGGTCAAGCTAACATGCTTTATGAAGAAATGAGGGGGAAAGGTGTTTCTCCTGATTGTGTGACTTTCAAC ATTCTTGTTGGGGGGCATTATAAGTATGGGAGAAATGGGGAATGGAACAGGTTGTTAAAAGATTTTATAGTAACAGGATT TTTCCCTGATTCTTCACTATATGATGTATCAATATCGTGGCTATGTTGGGCTGGTAGACTAGATGAGGCCATGAAATTAT TACAAGATGTACTTGAAAAGGGACTAACTCTTAGTGTGGTTGCCTTTAACTCATTAATAGGAGCCTATAGCAGGGCAGGT TTAGAAGACAAAGCTTTTGAAGCCTATCATATTTTGGTTAAATGTGGTTTTACTCCTTCATCGTCCACGTGCAATTCTTT GCTTATGGGTTTGTGTAGGAAGGGGAGGCTGCAAGAAGCCAGGATACTTTTGTATAGGATGTTAGAGAAAGGGTTTGCCA TCAACAAAGTGGCCTACACTCTGCTTTTTGATGGATATTTCAAGATGAACAATCTGGATGGGGCTCTAAATCTCTGGAAG GAAATGGAAGAAAGAGGAATATATCCAGATGTTGTTGCCTTTACAGCCTTCATAGATGGACTTTCAAAAGCAGGTTATGT TGAGGAGGCGTATGAAAAGTTTGTAAAAATGTCAGCTATCGGTTTTGTTCCTAATAATTTTGCATATAATTCTTTGATTG GTGGGTATTGCAACTGTGGGAAGATGCCTGAAGCATTGAAGTTGGAGAAAGAGATGAGGCTAAAAGGCCTTTTTCCCGAC ACCTTTACCTTCAATATCATCATTGATGGGTTTTGTAGACAAGGAGAAATGAAATCTGCAATTGACGAATTTCATCGCAT GCACCAGATTGGTTTGATGCCAGATATATTCACATTTAACATATTAGTTGGTGGATACTGTAAGGCATTTGACATGGTTG GTGCAGTTGAGGTTGTTAATAAAATGTTCACATGTGGGCTTGATCCAGATATCACAACCTATAATACACACTTGCATGGT TACTACCTTGCTCATAAAACGAATCGCGCAGTTATGATTTTGAATGAGCTTGTCTCTGCTGGTTTTGTTCCTAACACAGT GACATACAACATTATGATAAATGGTATTTGTAGTGATATTTTGGATCGTGCTTTGATTCTGACTGCAAAGTTACTTAAGA TGGGTTTTATTCCAAATGTGGCTACAACCAATATATTGTTGTCTCACTTTTGCAAGCAAGGGATGCCAGAGAGGGCCTTA CAATGGGGTCAAAAGCTTAGGGAGATTTGTTTTGGTTTTGATGAAATCTCCTATAAAATACTGGACAGAGCTGACCATAT GGTGCAGGATGATGTTGAACTTGTGAGAGGAACATATGAAAAGGGCCTTTTTTTGGATTTCCTAATGTACATTACATTTG ATTATTTTTCAAGAAATAGAATTCATAACATAGAGACTGAGAATAGTCTAAGGTTGATTGAAAGTCAATTTGTTGCTTTA TGA
Protein sequence (LotjaGi1g1v0672600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSANLPLLFLLRQRHHHSFNLLTLFSFSRSLHSPPSPSHCYHYLTQFLPSGSPNFNPLTVITPRERRLVVVGLTHIVKSD NAFILKAFSLRFYPLFLAKIMELLQTREAAFAFFKLAFEGEGGGGGHDSEELVRSCCEAAHVLAAHDLQLQAQDVVSWIF ARIGAGRSKEVVKFMWQNHNEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSV WKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKN GCEPSMATFSTITHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFN ILVGGHYKYGRNGEWNRLLKDFIVTGFFPDSSLYDVSISWLCWAGRLDEAMKLLQDVLEKGLTLSVVAFNSLIGAYSRAG LEDKAFEAYHILVKCGFTPSSSTCNSLLMGLCRKGRLQEARILLYRMLEKGFAINKVAYTLLFDGYFKMNNLDGALNLWK EMEERGIYPDVVAFTAFIDGLSKAGYVEEAYEKFVKMSAIGFVPNNFAYNSLIGGYCNCGKMPEALKLEKEMRLKGLFPD TFTFNIIIDGFCRQGEMKSAIDEFHRMHQIGLMPDIFTFNILVGGYCKAFDMVGAVEVVNKMFTCGLDPDITTYNTHLHG YYLAHKTNRAVMILNELVSAGFVPNTVTYNIMINGICSDILDRALILTAKLLKMGFIPNVATTNILLSHFCKQGMPERAL QWGQKLREICFGFDEISYKILDRADHMVQDDVELVRGTYEKGLFLDFLMYITFDYFSRNRIHNIETENSLRLIESQFVAL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 127 | 391 | 265 | 4.4E-153 | – | |
Gene3D | 130 | 273 | 144 | 7.7E-20 | ||
ProSiteProfiles | 185 | 219 | 35 | 10.753 | ||
TIGRFAM | 189 | 220 | 32 | 5.7E-6 | ||
Pfam | 189 | 217 | 29 | 0.0015 | ||
ProSiteProfiles | 220 | 254 | 35 | 9.01 | ||
Pfam | 225 | 268 | 44 | 2.9E-10 | ||
ProSiteProfiles | 255 | 289 | 35 | 9.81 | ||
TIGRFAM | 257 | 291 | 35 | 3.4E-5 | ||
Gene3D | 274 | 352 | 79 | 5.7E-22 | ||
Pfam | 289 | 338 | 50 | 5.7E-14 | ||
ProSiteProfiles | 290 | 324 | 35 | 12.737 | ||
TIGRFAM | 292 | 325 | 34 | 2.3E-9 | ||
ProSiteProfiles | 325 | 359 | 35 | 11.345 | ||
TIGRFAM | 328 | 361 | 34 | 1.2E-6 | ||
Gene3D | 353 | 424 | 72 | 9.5E-18 | ||
Pfam | 359 | 406 | 48 | 6.6E-14 | ||
ProSiteProfiles | 360 | 394 | 35 | 12.156 | ||
TIGRFAM | 363 | 396 | 34 | 7.0E-9 | ||
PANTHER | 385 | 520 | 136 | 4.4E-153 | – | |
ProSiteProfiles | 395 | 429 | 35 | 7.651 | ||
Gene3D | 425 | 491 | 67 | 1.3E-9 | ||
ProSiteProfiles | 430 | 464 | 35 | 9.788 | ||
Pfam | 438 | 462 | 25 | 0.034 | ||
SUPERFAMILY | 443 | 671 | 229 | 9.94E-8 | – | |
ProSiteProfiles | 465 | 499 | 35 | 10.622 | ||
Pfam | 465 | 513 | 49 | 4.0E-9 | ||
TIGRFAM | 467 | 500 | 34 | 1.1E-4 | ||
Gene3D | 492 | 563 | 72 | 3.9E-15 | ||
PANTHER | 494 | 662 | 169 | 4.4E-153 | – | |
ProSiteProfiles | 500 | 534 | 35 | 11.224 | ||
TIGRFAM | 503 | 535 | 33 | 6.8E-5 | ||
Pfam | 535 | 583 | 49 | 1.7E-11 | ||
ProSiteProfiles | 535 | 569 | 35 | 11.838 | ||
TIGRFAM | 537 | 571 | 35 | 1.7E-8 | ||
Gene3D | 564 | 635 | 72 | 1.6E-19 | ||
ProSiteProfiles | 570 | 604 | 35 | 10.885 | ||
TIGRFAM | 572 | 605 | 34 | 4.5E-4 | ||
Pfam | 604 | 653 | 50 | 9.4E-17 | ||
ProSiteProfiles | 605 | 639 | 35 | 12.638 | ||
TIGRFAM | 608 | 641 | 34 | 7.0E-6 | ||
PANTHER | 632 | 802 | 171 | 4.4E-153 | – | |
ProSiteProfiles | 640 | 674 | 35 | 12.2 | ||
TIGRFAM | 642 | 674 | 33 | 3.7E-5 | ||
Gene3D | 651 | 760 | 110 | 5.4E-27 | ||
Pfam | 671 | 702 | 32 | 3.6E-8 | ||
ProSiteProfiles | 675 | 709 | 35 | 10.567 | ||
TIGRFAM | 677 | 710 | 34 | 1.3E-5 | ||
Pfam | 709 | 758 | 50 | 1.8E-11 | ||
ProSiteProfiles | 710 | 744 | 35 | 9.339 | ||
ProSiteProfiles | 745 | 778 | 34 | 7.344 | ||
Gene3D | 761 | 834 | 74 | 8.2E-6 | ||
ProSiteProfiles | 779 | 809 | 31 | 7.53 | ||
Pfam | 782 | 808 | 27 | 0.11 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0672600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…