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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0672600 |
| Transcript ID | LotjaGi1g1v0672600.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pentatricopeptide repeat-containing protein; TAIR: AT5G01110.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110; TrEMBL-Plants: tr|A0A0R0JD32|A0A0R0JD32_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0672600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:123748074..123757503) extracted from Lotus japonicus Gifu genome v1.2.
CCAGTGTTCCAATCCAACCTCACCGCACGTTGTACTGTGTCTGTGTCACTCTTCCACTGCTCCGAATGTCAGCTAACCTT CCTCTCCTCTTTCTCCTGAGGCAGAGGCACCACCATTCTTTCAATCTCCTCACTCTCTTCTCCTTCTCTCGCTCCCTCCA TTCTCCTCCTTCACCCTCCCATTGCTACCATTATTTGACCCAGTTTCTCCCATCTGGGTCACCCAATTTCAACCCCCTCA CCGTAATCACCCCCAGGGAACGCCGCCTCGTGGTGGTGGGACTAACCCACATCGTGAAAAGCGATAACGCTTTCATCTTG AAGGCATTCTCCCTCCGTTTCTATCCACTCTTCCTCGCCAAGATCATGGAGCTGTTGCAGACCCGGGAAGCCGCATTTGC ATTCTTCAAATTGGCATTCGAGGGTGAGGGTGGTGGTGGTGGTCATGATTCAGAGGAGCTTGTTCGGTCGTGCTGCGAGG CGGCGCATGTTCTGGCAGCTCATGACCTCCAGCTGCAGGCCCAGGATGTGGTTTCGTGGATTTTCGCGAGAATCGGTGCT GGTCGAAGCAAGGAGGTTGTGAAGTTCATGTGGCAGAATCACAATGAGTATGAGTCTGATTTTTCTGTCTTGAATACGTT AATGCGGGGTTTTTTGAATGTGGGCATGATTTTTGAGGCATTGGATGTTTTGCATAGGATGAGGGATGTAGGAGTAAGGC CAAGCTTATCTGCAATTACTATTCTTTTTAGGTTGTTGCTTAGGGTTGGTGATTATGGCAGTGTGTGGAAGTTGTTTAAA GATATGCTCCGTAAAGGGCCTCGACCTTCAAGCGTCACGTTTAATGTGATGATTTGTGGGTTTTGTAGACAGCAGGGGCT TGTTGTAGGGGAGAGTTTGTTGCATTTGATGCCCAAGTTTGGGTGTGATCCGGATGCTTTCACATATAACATTCTTATTA ATGCTTACTGCATTAAGGGGAAGACTTCGGTTGCGATGGATTGGCTGAATATGATGATGAAAAACGGTTGTGAGCCGAGC ATGGCCACGTTTAGTACCATCACGCATGCTCTTTGCAGGGAAGGAAACGTGATAGAGGCAAGGAAGGTTTTTGATAGAAT TCAGGATATGGGTATTGCTCCAAATACTACAATATACAACACGCTGATGGATGGATATGTGAAGGCGAGGGAGATTGGTC AAGCTAACATGCTTTATGAAGAAATGAGGGGGAAAGGTGTTTCTCCTGATTGTGTGACTTTCAACATTCTTGTTGGGGGG CATTATAAGTATGGGAGAAATGGGGAATGGAACAGGTTGTTAAAAGATTTTATAGTAACAGGATTTTTCCCTGATTCTTC ACTATATGATGTATCAATATCGTGGCTATGTTGGGCTGGTAGACTAGATGAGGCCATGAAATTATTACAAGATGTACTTG AAAAGGGACTAACTCTTAGTGTGGTTGCCTTTAACTCATTAATAGGAGCCTATAGCAGGGCAGGTTTAGAAGACAAAGCT TTTGAAGCCTATCATATTTTGGTTAAATGTGGTTTTACTCCTTCATCGTCCACGTGCAATTCTTTGCTTATGGGTTTGTG TAGGAAGGGGAGGCTGCAAGAAGCCAGGATACTTTTGTATAGGATGTTAGAGAAAGGGTTTGCCATCAACAAAGTGGCCT ACACTCTGCTTTTTGATGGATATTTCAAGATGAACAATCTGGATGGGGCTCTAAATCTCTGGAAGGAAATGGAAGAAAGA GGAATATATCCAGATGTTGTTGCCTTTACAGCCTTCATAGATGGACTTTCAAAAGCAGGTTATGTTGAGGAGGCGTATGA AAAGTTTGTAAAAATGTCAGCTATCGGTTTTGTTCCTAATAATTTTGCATATAATTCTTTGATTGGTGGGTATTGCAACT GTGGGAAGATGCCTGAAGCATTGAAGTTGGAGAAAGAGATGAGGCTAAAAGGCCTTTTTCCCGACACCTTTACCTTCAAT ATCATCATTGATGGGTTTTGTAGACAAGGAGAAATGAAATCTGCAATTGACGAATTTCATCGCATGCACCAGATTGGTTT GATGCCAGATATATTCACATTTAACATATTAGTTGGTGGATACTGTAAGGCATTTGACATGGTTGGTGCAGTTGAGGTTG TTAATAAAATGTTCACATGTGGGCTTGATCCAGATATCACAACCTATAATACACACTTGCATGGTTACTACCTTGCTCAT AAAACGAATCGCGCAGTTATGATTTTGAATGAGCTTGTCTCTGCTGGTTTTGTTCCTAACACAGTGACATACAACATTAT GATAAATGGTATTTGTAGTGATATTTTGGATCGTGCTTTGATTCTGACTGCAAAGTTACTTAAGATGGGTTTTATTCCAA ATGTGGCTACAACCAATATATTGTTGTCTCACTTTTGCAAGCAAGGGATGCCAGAGAGGGCCTTACAATGGGGTCAAAAG CTTAGGGAGATTTGTTTTGGTTTTGATGAAATCTCCTATAAAATACTGGACAGAGCTGACCATATGGTGCAGGATGATGT TGAACTTGTGAGAGGAACATATGAAAAGGGCCTTTTTTTGGATTTCCTAATGTACATTACATTTGATTATTTTTCAAGAA ATAGAATTCATAACATAGAGACTGAGAATAGTCTAAGGTTGATTGAAAGTCAATTTGTTGCTTTATGAACTCGATTGCTA CTTGAGCTATTGCACCAAAAAGTGGTTACAAAATGTTACATGGCACAAACTGTAAGAAACCAGGGAAGGATTGGCTACCT TTTTACCAGTCTGGAGTGCTGTTATGTGTATTTCTCAATGAAGGGAAATAACAGCTATCCTTTTAAAGGACTGCAGGGGA AGGATAGTTTTGCTTCTGAGATTTTGAGACCTCAATAACGCAATCAGTCCGAAATGTGGCTGAAGCTGCTGAAGTGCAGG TAATGAAGAATGTTCTGTAAGTAATTAAATCTGTATACTGTTGAAAAGTCTATGATATCAAATCCTGCTCCTTCCACCTG TTTTTAGTATGTGCTTCTTAGGCTTTATGACCCACTGGGAAGACTTAGGATTGATTAAGATAGTTTTTTTAGAAGAGGGA GGTGGGAATTTATTTAGCATGCTTGAAATGAAGTTATTGTGGTTGCATTGATTTGGCATTGAACGATAAGGTACAAATCC CCTAAAAACTTAAGTTATAAGAAGAAAGCCTAACTATATTTCTAACAAATATTATGGGGGATCTCAAGTGTCTGACTGAA AAATTGCAAATACTTACAAAAAAATTGTTGATTTCTCATGTTAATAGTGTTTGGCATGGCAGGAAACTATTGCTATGAAA CTTAATGTTCAACAGCTGTAATCTTTCATTGTATGAGAAACTGAGCAAATTTGGTTTGCTTCTTTATGATTTATGATTCT TGGTGAGGAAAAAAATTAGCGGGGAAATTACAGAACAGAATTTGGGAAAACAAACAAATGATTATGAGGTAGTTTTTATG GTGTCCCCCCCCCCCCATGTAATCTGTTAATATACACACACCATTGTTTGGTACATTTATTTTACCAATATATTAAAAAA AGGCAATTGTGAGAGAAAGATTTATTGTTTATAGTGCTTTTACATTTCTGCTATTCTTGCAATACTGGCAATGCTATTCT CAGCCTTCAGTCTTGAAACTACACAAATGTGTGCGGTTTTTAGTACTACCCTATAGGGTCATGAGAAAGAATATGGCCTC ACCACTTTCAGTTGCCTTATCCCTTAAATTGGCACTACTACTACTACTACTACTGCTGCTACAGTGCTACTACCCTATAC ATTAGTATGAGCTTAGGTTAGTTCAATTTCCAAAATATATTGGGATCTATCATTCATGGATCTCAGAATCAGGAATTAGC TGTTGACAAAAGATCTTGTCGTGTTTAATTTGTAGCTTATGTTTCTTGACAAAATTAGGAATATCAAATTGAACATTTCA TACGTCGAAGTGAAATTTTCAATCGATTAAAACTATCATAATGATGGCCCAAGATATAAATTAGAACTAAGTTTGGCTCT TGGCTTTCTACATTTCAGATATATGAAGACAAGGTGGCGGAGAAAAATGAGGCGGATGCCAAGGCAATAATTTTGATGCT CATAAGAGGAGAGAACATCAAAAGATTGATTGTTATGAGACAGAAAAGGTAGAAGCAAGAGAAAATGAGCTGGACTCCGA GGAAATGCTGAACGATTGGGACTTGAGCGGATGGCTACAGGCTATCCTAATGTTGTATAATCTTAAATAAGCAGAACAAG ATGGAGACTTCAGTTTGAGAATCTTGAATACAAAAGCAAAGATGAAGAAGTGGTTCAGTGTTTATCAGTGAAAAAATGAG CTACCCCTACCATTAGGCGGAAATATGTTTTTGTTAAAGCTTTTGATGTGGTTGAGAAACCTGATAAGGAGATAAATATG TTTCAGCCAGAAATGGAAATTTCACTCAATTATGAAGAAATAGGCTGCATTTCACATTTATAAAGTCATATTATTGGCAG GTAGAGTCATGAAGGAAAATGAAAATAATCTAAAAAATAAATAAATTAAAGATGTCAAAGTTGAAGGAAAAACTAAAACT CTTATTGTGCCTGTCCCTGAGGAGATACTCCAAGTCTATTAGTCAATTGGCTATGACAGTCCATTTGGAGGAGTCAGGGT AGGTGCCTGAAAAAATAAGTCAACGATTTAGAACCTGTTTGGGTACTGGGTTGAAAGATCTTGAGCCCGTTTGGATGCGG ATTAAGAGCACTTAGTGGAGCTTATCTAGTGCATTTTTTTAGTAGAGAAGCTCCAATAAGTGCTCTTTGGTCCGTATCCT AAAGGGCTCCTTGTCTACTGGAATAAGCACTTTTGAGAAGATCAGTGATGTTTGGGTAACTCTATTTCATTAGCTTTTGA CTTCTGAGAAGCTCTTAAAAAAGCTTATTTTGCAGCTCATTTTAACAGCTTCCCTTCTCAATTTGAGAAGCTGAACATAA AAACTAGTTGGACAAAATAACCTATCAAAGCTGCAAAGTTACAACTCCTGTCCCATTCTTACTCCATGTGTTGTAAGTTG TAACAAAGATGGCTCTCTGTAAACCCTAGCAAAGATCCTTGCGTCGCATTGCCATTCACATAGTTGTTGGCTGCAAGAGG TTGCATTTCATCGCTTAATTACCTGAGATCCTACCAGGTTTGCGAATTCCATCCTTCTTTCTCCATTTTGGCTGTTTCTC CATATCATCCATGGCACGCTGGTGAATTTGTGGTTCATTTTCAGGTCTCTTTACTGCTCTTGTTTTGATCTTTTTTCTCA TATTATTGCTTTTCTTTGGAATCTCGATGTTGGAGTAGCTTGAATTGAAGGTAAAGATTTCTTGTAGTATTTAAGGTTTT GGATATTAATTTTTTCTAGTATTTTGTCTTTTTACTCCTATGAAGCAAGACCATGAATTAATTGAGTTTTTTCTTCTCTT TATTTGTCTAATTTTTCTTATTCTTAATTTTGAGATTCTCAATGCTGGGACTATTGATTGGGTAGGTACGTTCATTGTTT TTCTGGCCTCTAATCTCAAGATTTTTAGTTTTGTCCCTTTTAATAGTTCTGTTATGTTTCAAACCCGGTAAGAAAACAAA GCATAAGTTGCCTTTGTTAGGAGTGCAATGCGCCCCATAAATTTCTAAGGGCAAGTGTACCCTATCATAAGTGATACAAG ACAAGGAGTCTCACATATAATTCCCTTAGGGATCACTAATGAGTACTCTTTAAGATTCTTATGCTATGCAAATAAACAGA ATACTGTTGAGAATAAGATAGAGAATACTAGGGGGCAAGAATTAAGAAAACAATGAGAAAACTAACAATATCCAAGAAGT TACTTACTATTAACTCTGAAGCTCGGGCCTCATTGATGTGGATTCTTTAAGCAACATATATCCTAGAATCAAAGGACAAC CACTCCTACTTATGTTTTGTACCCTATGGCCGTGACTCAATTATAGTCTAAAACTCTTCTTTTTCTGCCTATTTGGTCTG TTAGTGTATTATACTGTAAGCTTTGTTAGTTTTGTATTTTCTGTTTATGTTAGTTAGTGTCGGGCTGTATCTAAACTCTA GGGCCTAGGCGGTTGGTTACATTCTGTTTTTTCACAGCTCTCTATAGAAGAGCTGCTCTTTGTATTCTTGAATAATGAAT TCAATTCACACATTTTATGTTACTCTAGTTTTCTCTTTCTCTCTCAATACTGTTTTCTAATATGGTCCATAAAACAAAAT TAGCAGAAATTTGCATTTAAGCCTTGAGGAGTTCATTAACTAAAGAAAATCCATTGTCAAAGTACAAGATCCACCCTCAG CCTCAGTTGAGCGATTAGTTCATCATGTTTGGTTCAATCAAGACAATAAATTGAAATGCAAGTTCCATAAATATAATGAT ACAGGCAGAAAATAGAAGAATCTAAGAAATATTCCCTTCACTAAATTTTGGACTCGCTTCTCTTTAGAAGTATATCCTTA GATGTCTTTGTTCTCTCTATAGGGTTCCTTTAACATATGTCTTCGAATTTAGTTTAGACCTCACTCTGCTCCAAAATCTA GCTTGTAAGGTGAGGATTGCCAAAACCTTTATAAGTTCTATGTTGGCCTTATCTCTAGTCGATGTGGGATCTCATCCCTC CCTCGCGCCCAGGAGTAGACATCTGGAGCGTGGAGATTATAGGTCTTTTTTTTATTGCTCTGGAAATCCGTGGGGCCAGG TTGATTGCACTGGAATATCCACGGGGCCAGGTAGATTGCACTGGGAAAGCCATGGGCCCTGGTTTTTTTTTCACAAGGGT GGGTGGCCAAATATCGGATCTAGGATCGACTCTGATACAAAGTTAAATAAGAAAGAGTGTGAGACATTGGACTGAATTCG TGTGTCTCAACTACACATCGAGTGTATTAATAATAGGGTACGATAAATACATTATATCATTGTTTCCCTATTTACAGTGA TTGCGCTATCTAATTACAATTATTATAAGATGTCCTACCCATTTAGATAAATATATCCTACCCATTTACATTATGTCTAA CAAGTACAAAGCTTTGAGGTTCTTGTCATGAACCAACCAACTATCCCAAAAGCTGAAGCTATTGGGTGAAGGGGAAGGGC AAACCTGGTGCTATAAATCTCCCGCTATGTGCAAGGTCCACGGAGGGGCCGGACCCACTTTGTGGATCTAGTATAGGCAG CTTTTACATGACATTTTTGCAAGAGGCTGATTCCACTGCTCGAACCTATGACCACAAAGTCACATGCCAGCAACCTTACC GTTTTGCTGAGGCTTGCCTTCTAAATAATTAGTTTTTGAAAACACATGAATAATTCTATATTATATTTTTAACACATTAT GATATAAGTAGTTTGTGTTGGTAGTCCATATATCATGACAATCGTGTACTTTTTATTCTGTGTTGGTTCAAAAGATTAAT AGCAGATAAGATGGAAATTGTGCATTTGCTTATAGTAGCTTTGTCTTGGAAACTCAATTTCCATTTACATATAATTGGGG CATTGCTGTTTGAAGCCATCCAAATTTCATCATGTAACCCAGCTTGAAATTTGCTTCTGGTTTAATGATGGTTACTACCT GTCTGTTGCTGTAATTTCCCTGCCTTTCTTCTTGTTCTTTACTTAAGTTGGAAGATGAGATCATTCTACTCTCCTTTCTT ATTTTGGGATTGTTTAACATGTTCTTGACTGGCCTAAACCATCACGAACCTGTTGCAGAACATTATGTTCTACACCAGAT GTAAAGATACTCTTCAAACAGATTTTTGTTCAGAGAATTATCTCATTGTATAAATATTTTAAATCTGCTTACATCTATCT ACTGGAATCCAGTGGTTAAAGGTCTAGAATCCATCTAGTTTAGCGGGAAGGAGTATCCGGATCAGCCAGTTCTTCATGCT AGTCTTGACTGGGTGATCTTCAATAATGTTCTTACATCAGACAGTTCTATGACAGCATTTTTAACAGAGTGGTATGTGAA ATTATCTTAAATATTCCTTTTTTTTGGGGGGGGGGGTGCTTCTATCACTTCTAACAGATCATTTATTGCATACAAAGAGG TTCGCCCTTAAGGGTGTGCTCAAACTCATTGGTGTTTGTTACATTAAGGTGTTGCCATTGCATCCAGTATTTTGCTGTTC TTATTATCTATGACTATAGTATTCTCAATGCCAAAAATACAGAATTAACACATTCCATTGCTTTAGGTAGAATGATTATT GGAAGAGGTTTAGAATTAACACATTCCAATGCTTCCTTGAAATTTAATAGAATGAGAAGGTATTTCTCTTTTAATGTATA TCTTGTTTAGTGCAAGGGTTAGGTTATAGCCCATTGCCCTTTAATGTGTTGTGTAAAATACACCTAATAGGTTAATTGGT TAAAGCCAATCCTACTTTTTGATCATAACTGAGCAGGAGCTATATTTATTAGTGAGGAATGTTAGATATTTCCATGATGC CATCGAAGGTGCTCATTTAACGTTGCCTCCATATGTGTTGGCAGTGCAATGTAATTTTTTGTATGGAATACCTGTACACA CCATTCATATATTTCAAACAGTATTTTTTATATTTTTATGAATGAAAAATTTGTACTATTAAGCCAAATCAATGACAACT CTTACTTTTCATCTAAAAGCTAACACTGCTAAGTTAACGGTGAAGTTAAGAAAGTCTCTCCTGTAATTTCTTTGTTGTTT TTATGTTCCTTTCCCTTAAAAGAAGGAAAATTCAGTAGAGCACCAAGATGTGAATTCTTCTCTTTAAGCCAAAGTCTCTT GTTCCAGTTAATTTGGTAGTTCAATTTGCAGTAACTCTTTTAAATCTGATTTGATAGGAATATTATGTTTGTTGGAGTTT TAAACTTTCTACTTTTTTTTGGTGAGCTTAAATGGGAATATCAAATGAAAAGTAAAAAGTTTGTAGCCAGCCTATGTTGT TGTTGACAGTGCCAGATTATCCACTTATTCTGTTTTTTTTTTTTTTAAGAAAAAGTTTGGGTGGGTTCAGCTCTGGCCAC CACCACAGGTCAGGGCATATCTCCGGGACTATACGTTGCTTACAGAGATACTTACCAATCGCTCACCAACACAACCCTCA CATCGGCAGCAAAAATTGAGCACACAACCTCTTGAGGGGGAAGGAGTCCGTCTTTACCATCAGAGCCAGACATGTGTTGG CATTATTCATGTATTCTTTATATTATTTCTCTTTAACCAAATTTGCAGCTGTTTCATCAAAGTGATGACTGGTGAACAAT ATTGAGATCGATAATGCTTGTTCAGTGTTTGGAAATTTTCAGAATTTAAAATAAATCATTGTATAATCAA
CDS sequence (LotjaGi1g1v0672600.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCAGCTAACCTTCCTCTCCTCTTTCTCCTGAGGCAGAGGCACCACCATTCTTTCAATCTCCTCACTCTCTTCTCCTT CTCTCGCTCCCTCCATTCTCCTCCTTCACCCTCCCATTGCTACCATTATTTGACCCAGTTTCTCCCATCTGGGTCACCCA ATTTCAACCCCCTCACCGTAATCACCCCCAGGGAACGCCGCCTCGTGGTGGTGGGACTAACCCACATCGTGAAAAGCGAT AACGCTTTCATCTTGAAGGCATTCTCCCTCCGTTTCTATCCACTCTTCCTCGCCAAGATCATGGAGCTGTTGCAGACCCG GGAAGCCGCATTTGCATTCTTCAAATTGGCATTCGAGGGTGAGGGTGGTGGTGGTGGTCATGATTCAGAGGAGCTTGTTC GGTCGTGCTGCGAGGCGGCGCATGTTCTGGCAGCTCATGACCTCCAGCTGCAGGCCCAGGATGTGGTTTCGTGGATTTTC GCGAGAATCGGTGCTGGTCGAAGCAAGGAGGTTGTGAAGTTCATGTGGCAGAATCACAATGAGTATGAGTCTGATTTTTC TGTCTTGAATACGTTAATGCGGGGTTTTTTGAATGTGGGCATGATTTTTGAGGCATTGGATGTTTTGCATAGGATGAGGG ATGTAGGAGTAAGGCCAAGCTTATCTGCAATTACTATTCTTTTTAGGTTGTTGCTTAGGGTTGGTGATTATGGCAGTGTG TGGAAGTTGTTTAAAGATATGCTCCGTAAAGGGCCTCGACCTTCAAGCGTCACGTTTAATGTGATGATTTGTGGGTTTTG TAGACAGCAGGGGCTTGTTGTAGGGGAGAGTTTGTTGCATTTGATGCCCAAGTTTGGGTGTGATCCGGATGCTTTCACAT ATAACATTCTTATTAATGCTTACTGCATTAAGGGGAAGACTTCGGTTGCGATGGATTGGCTGAATATGATGATGAAAAAC GGTTGTGAGCCGAGCATGGCCACGTTTAGTACCATCACGCATGCTCTTTGCAGGGAAGGAAACGTGATAGAGGCAAGGAA GGTTTTTGATAGAATTCAGGATATGGGTATTGCTCCAAATACTACAATATACAACACGCTGATGGATGGATATGTGAAGG CGAGGGAGATTGGTCAAGCTAACATGCTTTATGAAGAAATGAGGGGGAAAGGTGTTTCTCCTGATTGTGTGACTTTCAAC ATTCTTGTTGGGGGGCATTATAAGTATGGGAGAAATGGGGAATGGAACAGGTTGTTAAAAGATTTTATAGTAACAGGATT TTTCCCTGATTCTTCACTATATGATGTATCAATATCGTGGCTATGTTGGGCTGGTAGACTAGATGAGGCCATGAAATTAT TACAAGATGTACTTGAAAAGGGACTAACTCTTAGTGTGGTTGCCTTTAACTCATTAATAGGAGCCTATAGCAGGGCAGGT TTAGAAGACAAAGCTTTTGAAGCCTATCATATTTTGGTTAAATGTGGTTTTACTCCTTCATCGTCCACGTGCAATTCTTT GCTTATGGGTTTGTGTAGGAAGGGGAGGCTGCAAGAAGCCAGGATACTTTTGTATAGGATGTTAGAGAAAGGGTTTGCCA TCAACAAAGTGGCCTACACTCTGCTTTTTGATGGATATTTCAAGATGAACAATCTGGATGGGGCTCTAAATCTCTGGAAG GAAATGGAAGAAAGAGGAATATATCCAGATGTTGTTGCCTTTACAGCCTTCATAGATGGACTTTCAAAAGCAGGTTATGT TGAGGAGGCGTATGAAAAGTTTGTAAAAATGTCAGCTATCGGTTTTGTTCCTAATAATTTTGCATATAATTCTTTGATTG GTGGGTATTGCAACTGTGGGAAGATGCCTGAAGCATTGAAGTTGGAGAAAGAGATGAGGCTAAAAGGCCTTTTTCCCGAC ACCTTTACCTTCAATATCATCATTGATGGGTTTTGTAGACAAGGAGAAATGAAATCTGCAATTGACGAATTTCATCGCAT GCACCAGATTGGTTTGATGCCAGATATATTCACATTTAACATATTAGTTGGTGGATACTGTAAGGCATTTGACATGGTTG GTGCAGTTGAGGTTGTTAATAAAATGTTCACATGTGGGCTTGATCCAGATATCACAACCTATAATACACACTTGCATGGT TACTACCTTGCTCATAAAACGAATCGCGCAGTTATGATTTTGAATGAGCTTGTCTCTGCTGGTTTTGTTCCTAACACAGT GACATACAACATTATGATAAATGGTATTTGTAGTGATATTTTGGATCGTGCTTTGATTCTGACTGCAAAGTTACTTAAGA TGGGTTTTATTCCAAATGTGGCTACAACCAATATATTGTTGTCTCACTTTTGCAAGCAAGGGATGCCAGAGAGGGCCTTA CAATGGGGTCAAAAGCTTAGGGAGATTTGTTTTGGTTTTGATGAAATCTCCTATAAAATACTGGACAGAGCTGACCATAT GGTGCAGGATGATGTTGAACTTGTGAGAGGAACATATGAAAAGGGCCTTTTTTTGGATTTCCTAATGTACATTACATTTG ATTATTTTTCAAGAAATAGAATTCATAACATAGAGACTGAGAATAGTCTAAGGTTGATTGAAAGTCAATTTGTTGCTTTA TGA
Protein sequence (LotjaGi1g1v0672600.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSANLPLLFLLRQRHHHSFNLLTLFSFSRSLHSPPSPSHCYHYLTQFLPSGSPNFNPLTVITPRERRLVVVGLTHIVKSD NAFILKAFSLRFYPLFLAKIMELLQTREAAFAFFKLAFEGEGGGGGHDSEELVRSCCEAAHVLAAHDLQLQAQDVVSWIF ARIGAGRSKEVVKFMWQNHNEYESDFSVLNTLMRGFLNVGMIFEALDVLHRMRDVGVRPSLSAITILFRLLLRVGDYGSV WKLFKDMLRKGPRPSSVTFNVMICGFCRQQGLVVGESLLHLMPKFGCDPDAFTYNILINAYCIKGKTSVAMDWLNMMMKN GCEPSMATFSTITHALCREGNVIEARKVFDRIQDMGIAPNTTIYNTLMDGYVKAREIGQANMLYEEMRGKGVSPDCVTFN ILVGGHYKYGRNGEWNRLLKDFIVTGFFPDSSLYDVSISWLCWAGRLDEAMKLLQDVLEKGLTLSVVAFNSLIGAYSRAG LEDKAFEAYHILVKCGFTPSSSTCNSLLMGLCRKGRLQEARILLYRMLEKGFAINKVAYTLLFDGYFKMNNLDGALNLWK EMEERGIYPDVVAFTAFIDGLSKAGYVEEAYEKFVKMSAIGFVPNNFAYNSLIGGYCNCGKMPEALKLEKEMRLKGLFPD TFTFNIIIDGFCRQGEMKSAIDEFHRMHQIGLMPDIFTFNILVGGYCKAFDMVGAVEVVNKMFTCGLDPDITTYNTHLHG YYLAHKTNRAVMILNELVSAGFVPNTVTYNIMINGICSDILDRALILTAKLLKMGFIPNVATTNILLSHFCKQGMPERAL QWGQKLREICFGFDEISYKILDRADHMVQDDVELVRGTYEKGLFLDFLMYITFDYFSRNRIHNIETENSLRLIESQFVAL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 127 | 391 | 265 | 4.4E-153 | – | |
| Gene3D | 130 | 273 | 144 | 7.7E-20 | ||
| ProSiteProfiles | 185 | 219 | 35 | 10.753 | ||
| TIGRFAM | 189 | 220 | 32 | 5.7E-6 | ||
| Pfam | 189 | 217 | 29 | 0.0015 | ||
| ProSiteProfiles | 220 | 254 | 35 | 9.01 | ||
| Pfam | 225 | 268 | 44 | 2.9E-10 | ||
| ProSiteProfiles | 255 | 289 | 35 | 9.81 | ||
| TIGRFAM | 257 | 291 | 35 | 3.4E-5 | ||
| Gene3D | 274 | 352 | 79 | 5.7E-22 | ||
| Pfam | 289 | 338 | 50 | 5.7E-14 | ||
| ProSiteProfiles | 290 | 324 | 35 | 12.737 | ||
| TIGRFAM | 292 | 325 | 34 | 2.3E-9 | ||
| ProSiteProfiles | 325 | 359 | 35 | 11.345 | ||
| TIGRFAM | 328 | 361 | 34 | 1.2E-6 | ||
| Gene3D | 353 | 424 | 72 | 9.5E-18 | ||
| Pfam | 359 | 406 | 48 | 6.6E-14 | ||
| ProSiteProfiles | 360 | 394 | 35 | 12.156 | ||
| TIGRFAM | 363 | 396 | 34 | 7.0E-9 | ||
| PANTHER | 385 | 520 | 136 | 4.4E-153 | – | |
| ProSiteProfiles | 395 | 429 | 35 | 7.651 | ||
| Gene3D | 425 | 491 | 67 | 1.3E-9 | ||
| ProSiteProfiles | 430 | 464 | 35 | 9.788 | ||
| Pfam | 438 | 462 | 25 | 0.034 | ||
| SUPERFAMILY | 443 | 671 | 229 | 9.94E-8 | – | |
| ProSiteProfiles | 465 | 499 | 35 | 10.622 | ||
| Pfam | 465 | 513 | 49 | 4.0E-9 | ||
| TIGRFAM | 467 | 500 | 34 | 1.1E-4 | ||
| Gene3D | 492 | 563 | 72 | 3.9E-15 | ||
| PANTHER | 494 | 662 | 169 | 4.4E-153 | – | |
| ProSiteProfiles | 500 | 534 | 35 | 11.224 | ||
| TIGRFAM | 503 | 535 | 33 | 6.8E-5 | ||
| Pfam | 535 | 583 | 49 | 1.7E-11 | ||
| ProSiteProfiles | 535 | 569 | 35 | 11.838 | ||
| TIGRFAM | 537 | 571 | 35 | 1.7E-8 | ||
| Gene3D | 564 | 635 | 72 | 1.6E-19 | ||
| ProSiteProfiles | 570 | 604 | 35 | 10.885 | ||
| TIGRFAM | 572 | 605 | 34 | 4.5E-4 | ||
| Pfam | 604 | 653 | 50 | 9.4E-17 | ||
| ProSiteProfiles | 605 | 639 | 35 | 12.638 | ||
| TIGRFAM | 608 | 641 | 34 | 7.0E-6 | ||
| PANTHER | 632 | 802 | 171 | 4.4E-153 | – | |
| ProSiteProfiles | 640 | 674 | 35 | 12.2 | ||
| TIGRFAM | 642 | 674 | 33 | 3.7E-5 | ||
| Gene3D | 651 | 760 | 110 | 5.4E-27 | ||
| Pfam | 671 | 702 | 32 | 3.6E-8 | ||
| ProSiteProfiles | 675 | 709 | 35 | 10.567 | ||
| TIGRFAM | 677 | 710 | 34 | 1.3E-5 | ||
| Pfam | 709 | 758 | 50 | 1.8E-11 | ||
| ProSiteProfiles | 710 | 744 | 35 | 9.339 | ||
| ProSiteProfiles | 745 | 778 | 34 | 7.344 | ||
| Gene3D | 761 | 834 | 74 | 8.2E-6 | ||
| ProSiteProfiles | 779 | 809 | 31 | 7.53 | ||
| Pfam | 782 | 808 | 27 | 0.11 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0672600.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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