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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0696700 |
| Transcript ID | LotjaGi1g1v0696700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ankyrin repeat-containing protein; TAIR: AT3G09550.1 Ankyrin repeat family protein; Swiss-Prot: sp|Q9C7A2|ITN1_ARATH Ankyrin repeat-containing protein ITN1; TrEMBL-Plants: tr|G7L1N1|G7L1N1_MEDTR Ankyrin repeat plant-like protein; Found in the gene: LotjaGi1g1v0696700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:126443860..126447214) extracted from Lotus japonicus Gifu genome v1.2.
CAAAACCAGAGGCCATGTTGTCTTCTACGCGTTGTCGAGGATCTTGGAATGGGGCACCCACCCCTAACCCCATCCCCACC GTCGTAGCACTCGCCGCCGTCCTCCTCCTCCATGGATTACGGCCATGGTCCCCAATCCGAACCCGCCACCCCAAGGTCCA CCCTCTTTCTCTCCTCTTCCGGCAAGGCTCTCGTCGTCTCCAACTCCAACAAATCCCTCGTCGTTTCCAATTCCGACAAG CGCCTCGGCACCCCTAGGAAGAAGTATGTCAAGCAGGTCACCGGCCGCCATAACGACACCGAGCTCCACCTCGCTGCACA GCGAGGTGACGCCGCATCCATCCGGCAGATCCTCGGCGATATTGATGCTCTCATGACGGGGACCCTCAGCGGTGCTGAGT TTGATGCTGAGGTCGCTGATATCAGGTCCGCTATTGTGAACGAGGTCAATGAGCTGGGCGAGACCGCTCTGTTCACCGCC GCTGAAAAGGGTCACCTCAATGTCGTCAAGGAGCTCCTCCCTTATACCACCACCGAAGCACTTTCCTTCAAAAACCGCTC TGCCTTTGATCCCCTGCACATTGCAGCTAGCCAAGGCCATCAAGGTAAATAGGTGCATGTAACATTATAATAATATCTAC ATTCATTTGATGTGATTATTGCTAATATCTATGAAGAGTTTCAAATTCATGGGTAAGCAAAGTTTTTTTTTACATTATCA CTTTTATACGAATTGATCGAGCGGGATGATGTAGTGTGATCCATATAGATAACTGACCTCACTTAGTGGGATAAGACTGT TGTTGTTGTTGTATGACTTTTAAAGGAAATTCATATCTCAATGTGGATTGAAATAAAAGTTCATTTTAGTTCCATACACA CGCATAATACTCCAGGAGTATGTTTGGTTTTGCTTCTACTTGGGCACAATGGATTCTATTGCTTAGAAGTTACAAGGAGT CACTTCTCCGAATTTTAATCGATTATGCACTAACGTGTCCGAAGATTGATTTTTCAAACATGTAGGTAAAGTATATCAAA ATTTTAATTTGGACAAGTCTGATAGAATGCACATTGTTATGGAATTTCACTTTAGAGGACATTTTTACTAATAGGTGTAA ATAATAAGTATTTTTTTGACAGTACCTTTAATTAGTTATGTTTGTAGGCACTGTGGTCACATTATATTGTTGTGGCAGCT ATTGTGCAGGTGCTGCTGGACCATGACCCTGAGCTAATAAAGACGTTTGCGCAGTCAAATGCAACTCCTCTCGTCTCTGC GGCTACACGAGGACATGCGGGTGTTGTTGATCTGTTGCTGTCACGGGATCCTAGCCAGTTGGAGATAGCTAGATCCAATG GGAAGAATGCGCTCCATTTAGCTGCACGCCAAGGACATGTTGATGTTGTTAGGATATTGCTGGGGAAGGACCCGCAACTT GCTCGGAGGACTGATAAGAAAGGACAGACTGCACTTCACATGGCTGTCAAAGGTGTTAGCTGTGAAGTGGTGAAGCTGAT TCTTGCTGCAGATGCTGCAATTGTCATGCTCCCTGATAGGTTTGGCAATACTGCATTGCATGTAGCCACCAGGAAGAAGA GGGTAGAGGTATCATATCATAAACTGCAGACCTTTTAACAATGATAACACTAAATCCTTGAGGAGTTAGTTAATTATCTA CATGTCCTGTAATTTTATACGTATTGTCGTTTTTGTTTGTGGACAAGAGTTAGATACTAATGTTTTTGTGAAATTTATAT GCGTGTGGTGATGACTAGTAATTTTTTTTGCAGATAGTGAATGAGCTGTTACTTATTCCCGACACTAATGTGAATGCCCT GACTAGAGACCACAAAACAGCTCTTGACCTTGCGGAAGCGCTTCCAATATCCGAAGAAATTTTGGAGGTTAAAGAGTCCC TTATTCGTTATGGTGCAGTTAAAGCCAATGATCTTAACCAGCCCAGGGATGAGCTAAGGAAAACCATGACACAGATTAAG AAAGATGTTTATTATCAGCTTGAACAAACTAGAAAAACAAACAAGAATGTGAGTGGGATTGCCAAAGACTTAAAAAAGTT GCACAAGGCTGGAATCAACAATGCTACCAACTCAGTAACGGTGGTAGCCGTGCTATTTGCAACGGTTGCATTTGCTGCAC TTTTCACAGTTCCTGGTGGGGATGATAACACTGGAAGGGCTGTGATGGTACACACTGTGTCTTTCAAGTCTTTCTTCCTG TCTAATGCCATTGCACTTTTTACTTCATTGGCTGTGGTGGTAGTTCAAATCACACTTGTAAGAGGAGAGACAAAGTCGGA GAAGAGGGTTGTGGAGGTGATCAATAAGATGATGTGGTTAGCCTCTGTCTGCACCACAGTTTCATATATTTCTGCATCTT ATATAGTAGTTGGCCGGCGCAGCGAGTGGGCTGCAATCCTTGTCACTGTTGTTGGGGGGATCACAATGGGTGGTGTTCTT GGTACCATGACATATTATGTGGTGAAATCCAAACGTTCCCTAAGGTTGAGGAAGAAAGAGAAGTTATTATCAAGGGCTGG AACAAACTCATGGCGTCTCTCGGAAACTGATTCAGAAGCTCATCAAATTTATGCCATTTGATATTTACTTTGGACTTCAA TATAACTGACAAATATTGAAAAGAACTCTAGCTCAATTTGGAGGTTTCATGATTTCATCTGTTGATAGAGAAAAAAGATG GCTTTTAGTGCTTCAAAGTGGACAAAATAAAGGAGCCAAATTGGTAAGTTACACACTGAGAAAATGGTTGGTATCAGATA TAAGTTGTCACATTTATGGTACTTGAGAACATAATTGCACTTGTTTTGTTAGGTGCTGCCAAAGGCTTGAGGAAACATGA AGGGTGAGCAATTTGTGTTGGTTGGGAAGAAGCCTGCAGTGAGGGTCATGCCTTTGATCTCTTAGGTACACCTTCATTGT TAAGGCGAGGAACTCGCCTTTAGCACCTCCTGAAACTTATGTTACAGTCAATTTAAAATGTTGGTTGTTGTAAAAATAGT CTGAAAGGCCAGCCATTTAACCTGCTGATAACTGTGATGTAAGAGGATAAAATAATGAGTGTTACTAAAGCAACAGTTTT GGGGTAGCTTCAGGGTTTTGTAAATGACTGAGTCTGATAAAGTTAGCAGGAAGGCTCGGATACTTCCTAAGAATAAAGAG ATAGGTGTTAAAATGAAGAAAGATTTAAATTTACGAGGGGGAGATGGAAGTAATGAGAGTTATGGAATTGGATCTTATAT TGATTCCGTTGTCCACAGATCATAGATGCACTCTTGGACTTTTTTCTAATAAACTTAGATCACTGAGTTGGCTTA
CDS sequence (LotjaGi1g1v0696700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATTACGGCCATGGTCCCCAATCCGAACCCGCCACCCCAAGGTCCACCCTCTTTCTCTCCTCTTCCGGCAAGGCTCT CGTCGTCTCCAACTCCAACAAATCCCTCGTCGTTTCCAATTCCGACAAGCGCCTCGGCACCCCTAGGAAGAAGTATGTCA AGCAGGTCACCGGCCGCCATAACGACACCGAGCTCCACCTCGCTGCACAGCGAGGTGACGCCGCATCCATCCGGCAGATC CTCGGCGATATTGATGCTCTCATGACGGGGACCCTCAGCGGTGCTGAGTTTGATGCTGAGGTCGCTGATATCAGGTCCGC TATTGTGAACGAGGTCAATGAGCTGGGCGAGACCGCTCTGTTCACCGCCGCTGAAAAGGGTCACCTCAATGTCGTCAAGG AGCTCCTCCCTTATACCACCACCGAAGCACTTTCCTTCAAAAACCGCTCTGCCTTTGATCCCCTGCACATTGCAGCTAGC CAAGGCCATCAAGCTATTGTGCAGGTGCTGCTGGACCATGACCCTGAGCTAATAAAGACGTTTGCGCAGTCAAATGCAAC TCCTCTCGTCTCTGCGGCTACACGAGGACATGCGGGTGTTGTTGATCTGTTGCTGTCACGGGATCCTAGCCAGTTGGAGA TAGCTAGATCCAATGGGAAGAATGCGCTCCATTTAGCTGCACGCCAAGGACATGTTGATGTTGTTAGGATATTGCTGGGG AAGGACCCGCAACTTGCTCGGAGGACTGATAAGAAAGGACAGACTGCACTTCACATGGCTGTCAAAGGTGTTAGCTGTGA AGTGGTGAAGCTGATTCTTGCTGCAGATGCTGCAATTGTCATGCTCCCTGATAGGTTTGGCAATACTGCATTGCATGTAG CCACCAGGAAGAAGAGGGTAGAGATAGTGAATGAGCTGTTACTTATTCCCGACACTAATGTGAATGCCCTGACTAGAGAC CACAAAACAGCTCTTGACCTTGCGGAAGCGCTTCCAATATCCGAAGAAATTTTGGAGGTTAAAGAGTCCCTTATTCGTTA TGGTGCAGTTAAAGCCAATGATCTTAACCAGCCCAGGGATGAGCTAAGGAAAACCATGACACAGATTAAGAAAGATGTTT ATTATCAGCTTGAACAAACTAGAAAAACAAACAAGAATGTGAGTGGGATTGCCAAAGACTTAAAAAAGTTGCACAAGGCT GGAATCAACAATGCTACCAACTCAGTAACGGTGGTAGCCGTGCTATTTGCAACGGTTGCATTTGCTGCACTTTTCACAGT TCCTGGTGGGGATGATAACACTGGAAGGGCTGTGATGGTACACACTGTGTCTTTCAAGTCTTTCTTCCTGTCTAATGCCA TTGCACTTTTTACTTCATTGGCTGTGGTGGTAGTTCAAATCACACTTGTAAGAGGAGAGACAAAGTCGGAGAAGAGGGTT GTGGAGGTGATCAATAAGATGATGTGGTTAGCCTCTGTCTGCACCACAGTTTCATATATTTCTGCATCTTATATAGTAGT TGGCCGGCGCAGCGAGTGGGCTGCAATCCTTGTCACTGTTGTTGGGGGGATCACAATGGGTGGTGTTCTTGGTACCATGA CATATTATGTGGTGAAATCCAAACGTTCCCTAAGGTTGAGGAAGAAAGAGAAGTTATTATCAAGGGCTGGAACAAACTCA TGGCGTCTCTCGGAAACTGATTCAGAAGCTCATCAAATTTATGCCATTTGA
Protein sequence (LotjaGi1g1v0696700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDYGHGPQSEPATPRSTLFLSSSGKALVVSNSNKSLVVSNSDKRLGTPRKKYVKQVTGRHNDTELHLAAQRGDAASIRQI LGDIDALMTGTLSGAEFDAEVADIRSAIVNEVNELGETALFTAAEKGHLNVVKELLPYTTTEALSFKNRSAFDPLHIAAS QGHQAIVQVLLDHDPELIKTFAQSNATPLVSAATRGHAGVVDLLLSRDPSQLEIARSNGKNALHLAARQGHVDVVRILLG KDPQLARRTDKKGQTALHMAVKGVSCEVVKLILAADAAIVMLPDRFGNTALHVATRKKRVEIVNELLLIPDTNVNALTRD HKTALDLAEALPISEEILEVKESLIRYGAVKANDLNQPRDELRKTMTQIKKDVYYQLEQTRKTNKNVSGIAKDLKKLHKA GINNATNSVTVVAVLFATVAFAALFTVPGGDDNTGRAVMVHTVSFKSFFLSNAIALFTSLAVVVVQITLVRGETKSEKRV VEVINKMMWLASVCTTVSYISASYIVVGRRSEWAAILVTVVGGITMGGVLGTMTYYVVKSKRSLRLRKKEKLLSRAGTNS WRLSETDSEAHQIYAI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 404 | 404 | - | – | |
| PANTHER | 15 | 566 | 552 | 5.9E-241 | – | |
| PANTHER | 15 | 566 | 552 | 5.9E-241 | – | |
| Gene3D | 34 | 175 | 142 | 8.6E-19 | ||
| SMART | 60 | 89 | 30 | 1300.0 | ||
| Pfam | 65 | 174 | 110 | 2.0E-12 | ||
| SUPERFAMILY | 65 | 331 | 267 | 1.2E-45 | ||
| ProSiteProfiles | 115 | 349 | 235 | 42.601 | ||
| SMART | 115 | 144 | 30 | 13.0 | ||
| ProSiteProfiles | 150 | 177 | 28 | 8.923 | ||
| SMART | 150 | 179 | 30 | 2.0 | ||
| Gene3D | 176 | 374 | 199 | 1.7E-33 | ||
| SMART | 184 | 213 | 30 | 18.0 | ||
| Pfam | 192 | 276 | 85 | 5.7E-14 | ||
| ProSiteProfiles | 218 | 250 | 33 | 11.594 | ||
| SMART | 218 | 247 | 30 | 2.2E-4 | ||
| ProSiteProfiles | 252 | 284 | 33 | 8.79 | ||
| SMART | 252 | 281 | 30 | 0.051 | ||
| SMART | 286 | 316 | 31 | 0.021 | ||
| ProSiteProfiles | 286 | 319 | 34 | 9.404 | ||
| Pfam | 287 | 318 | 32 | 0.0035 | ||
| Pfam | 401 | 506 | 106 | 2.0E-25 | ||
| TMHMM | 405 | 427 | 23 | - | – | |
| Phobius | 405 | 427 | 23 | - | – | |
| Phobius | 428 | 446 | 19 | - | – | |
| TMHMM | 447 | 469 | 23 | - | – | |
| Phobius | 447 | 469 | 23 | - | – | |
| Phobius | 470 | 488 | 19 | - | – | |
| Phobius | 489 | 507 | 19 | - | – | |
| TMHMM | 489 | 506 | 18 | - | – | |
| Phobius | 508 | 512 | 5 | - | – | |
| Phobius | 513 | 538 | 26 | - | – | |
| TMHMM | 516 | 538 | 23 | - | – | |
| Phobius | 539 | 576 | 38 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0696700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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