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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0700500 |
| Transcript ID | LotjaGi1g1v0700500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ankyrin repeat-containing protein; TAIR: AT4G10720.2 Ankyrin repeat family protein; Swiss-Prot: sp|Q8GYH5|BAD1_ARATH Ankyrin repeat-containing protein BDA1; TrEMBL-Plants: tr|A2Q5K6|A2Q5K6_MEDTR Ankyrin; Found in the gene: LotjaGi1g1v0700500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:126852391..126855230) extracted from Lotus japonicus Gifu genome v1.2.
TGCACCACTTTTTAGTGGTGTAACTTTGCACCACTATGTTAATTGTCCATTTTATCCCTGTTCAAAAAATTAATCCCATC AAAATCCACCTGGTAATACCAATATTTTTTTCTTTTTATAAAATAATTTTTTTAACAAGGGTAAAATGGACAATTGGTAT AGTGGTGCAAGATTGCACCACTAAAAAGTGGTGCACATTAGGTGGCACCTAAAATCAAAGTCTTAACTTCTTTTCCTCTA TGTATACGAGCCTTTCCATGTTACATTCAGCAGCTTGCCGGCTTGATGTTATCAAAGTATTCACATTGTGCTCAATCATT CACGTACATTATCTTGTTATTATCATTTCTTCTCTAACCTCACTGATTATATATTAGTACATCAATCAATATTCCTCAAA TGGAGATTTTTGCAGCAGATCCAAATCAACAGGACGAGACAATGAGAGAACTCTATGATGCATCATTAAATGGATGTGTA AGTACCTTAAAAACTCTGATTCAAAGGGATCCTCTTATACTCAACAGAGTTCCACTCTATCCCTTCACTGAAACCCCACT ACACATAGCCTCTTTGCTAGGACACACAGAGTTCTGCCATGTTCTTCTTGACATGAATCCAAGTTTAGCAGGTGAAGTGA ACTCAGAAGGGCGTTACCCTCTTCATCTGGCTTCGGCTAAAGGCCACACCGAGATTGTGAAAGCTCTGTTGCTCACAAAT TCTGGTATTTGCTTGATTCGGGATAAAGATGACAAGCTTCCTCTCCATTTTGCTGCGATGAGAGGACGCCTTGGAGTCAT CAAGGAGTTGATCAGAGCCAAGCCACACTCCGTTAGGGAGATGGATGAGAATGATGATGGTTCCCTTCTGCACTTGTGCG TACGCTATAACCATCTAGAGGCCTTGAAATTTCTAGTGGAATCAGTAAGAGGAGACAATCAATTCCTCTGTACCAAAGAC ATAGAGGGCAACACTATTTTGCATTTAGCTGTGAGGCGCAGACAAATTAAGGTACTATATTTCATTCAACTAAACAAAAG TTTGAGGTCCTTCATCAGCTTAATTTCTAAAATATAATGGCATGAAATGGGACACTGGGAGTAGGGATGGCACCCATGCG GACATGGATTATGATCCTAATCTTAGTCCCCAAATTTGTCTCGGAGAAATTTTTGCTTTCATCCTCATTCCTATGAGGAA AAAATCCCCAAGTTGGGCTTCAAATGGAGCAATCCGTGCGGGAATCCCCATCTTGGAGGACATCCCTATCTGGGAGTCCC TTTTCTCTTCTCTCCTTCCTTTTCTCTGCTGATGTGTTTATTTTGTTCTATTCTCTCCTTTTTCTCTGCTGATCTGTTAA TTTTGTTCTCTTCCCCCTCTTTTTCTCTGCAGATATGTTAATTTTGTTCTCTTCTCCCTCTTTTTCTCTGCTGATATGTT GATTTTGATTAACATGTGATAGGGAAGGGTAAAATATAAAATAAAATAAAAAAAGGTTCTTTCAAGTGAAAGATAATTTT AAATAGAAATGAAACAAGTTGGGGTAGTCAAATAACACCTCTTCTATAATCTTTGCAGATCATTAAATTCTTGCTTTCAC TATCTGAAATGAGGACAGCATTAAGCACTTTGAACAGGGTGGGTTTAACACCTTTGGACATGTTGGTGAACCGTCCAAGA GATTCTATTAGACTTAGAATTGAACACATTTTAACTGAAGAAGGAGCTCAATCCTCACCGATCAATGATCCTCCAAAATG CAATGGTACACCACAACCACCACATCCCTCACTAAGCAATGATCCTCCTGAACCATCACAGTCCTCACCAAGCAATAATC CTACACAACCTCCCTCACAAAGCATTGATCCTCTACAACCATCACCACCCTCACCTAGCAATGGCCCTACACAACCACAA CCAACACAACCCTCACCAAGCCATGACCCTCCACAAACATCACCGAGCAATGATCCTCCACAACCACCCTCACCAAGCAA TAATCCTCCACAACCACAACACCCCTCACCAAGCAATGTTCTTTCACAACCACCATCACCCTCACCGAGCATAGCTGCTA ATGAACAACATGAAAGTAGTAGATGGGACAAGTTTGAGAAGTTCTGCACAACCTACCTCATAAACCAAGGATACTGGATA GACGGAAGAACAAAGGAAACATGGATGATCGCGGCCACTGTGATCGCAACCATGACTTTTCAGTCAGTGTTAAGCCCACC AGGCGGTGTGTGGCAAGCGGATTCAACAGACGGTGGCTACGCCTGCAAAGATTATGGTTTCTGTGAAGCGGGAACTGCAG TTGTGGGTTATGTTTGGTCCCCAGACTTTCTAAAATTCGTTTTCTTCAACTCCGCTTCTTTCTTCTTTTCTCTCTGTGTA CTTTTGATTCTCATTAGCGGGTTCCCGCTGGGGAATAAGGTCATCATGTAGATCTTGGCGGTTAAGATGCTCGTTGCTAT CACATTCATGCTACTCACGTACATGTGGGCATTGGGATTGGTGTGTCCCAATCATATTTATTATAGAATTCGTGATTTGG GGTATATTTTGGTCGGTATTTGGTCTTTCTTACTTGGTGTTGTTGGTTTGATTCAAATTATCAGAATAGTCTTGTGGGTT AGGTCAAGGCGCAGGTCCTCAACAAATGCTTCACTAACTCAAAGTTCTCTTGGTCGATCGGCTTAATGACTAAAGGTGGA AGTTGTTGCTTGGAAATTTTCTTCATACATCTCGTGTGGTGTATATATAGACATTCCATATGGCATGAGAGTGGAACGAA AAATGAAAGGATAAATGATGCAAGTAGTCGTAAAAGCGGG
CDS sequence (LotjaGi1g1v0700500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGATTTTTGCAGCAGATCCAAATCAACAGGACGAGACAATGAGAGAACTCTATGATGCATCATTAAATGGATGTGT AAGTACCTTAAAAACTCTGATTCAAAGGGATCCTCTTATACTCAACAGAGTTCCACTCTATCCCTTCACTGAAACCCCAC TACACATAGCCTCTTTGCTAGGACACACAGAGTTCTGCCATGTTCTTCTTGACATGAATCCAAGTTTAGCAGGTGAAGTG AACTCAGAAGGGCGTTACCCTCTTCATCTGGCTTCGGCTAAAGGCCACACCGAGATTGTGAAAGCTCTGTTGCTCACAAA TTCTGGTATTTGCTTGATTCGGGATAAAGATGACAAGCTTCCTCTCCATTTTGCTGCGATGAGAGGACGCCTTGGAGTCA TCAAGGAGTTGATCAGAGCCAAGCCACACTCCGTTAGGGAGATGGATGAGAATGATGATGGTTCCCTTCTGCACTTGTGC GTACGCTATAACCATCTAGAGGCCTTGAAATTTCTAGTGGAATCAGTAAGAGGAGACAATCAATTCCTCTGTACCAAAGA CATAGAGGGCAACACTATTTTGCATTTAGCTGTGAGGCGCAGACAAATTAAGATCATTAAATTCTTGCTTTCACTATCTG AAATGAGGACAGCATTAAGCACTTTGAACAGGGTGGGTTTAACACCTTTGGACATGTTGGTGAACCGTCCAAGAGATTCT ATTAGACTTAGAATTGAACACATTTTAACTGAAGAAGGAGCTCAATCCTCACCGATCAATGATCCTCCAAAATGCAATGG TACACCACAACCACCACATCCCTCACTAAGCAATGATCCTCCTGAACCATCACAGTCCTCACCAAGCAATAATCCTACAC AACCTCCCTCACAAAGCATTGATCCTCTACAACCATCACCACCCTCACCTAGCAATGGCCCTACACAACCACAACCAACA CAACCCTCACCAAGCCATGACCCTCCACAAACATCACCGAGCAATGATCCTCCACAACCACCCTCACCAAGCAATAATCC TCCACAACCACAACACCCCTCACCAAGCAATGTTCTTTCACAACCACCATCACCCTCACCGAGCATAGCTGCTAATGAAC AACATGAAAGTAGTAGATGGGACAAGTTTGAGAAGTTCTGCACAACCTACCTCATAAACCAAGGATACTGGATAGACGGA AGAACAAAGGAAACATGGATGATCGCGGCCACTGTGATCGCAACCATGACTTTTCAGTCAGTGTTAAGCCCACCAGGCGG TGTGTGGCAAGCGGATTCAACAGACGGTGGCTACGCCTGCAAAGATTATGGTTTCTGTGAAGCGGGAACTGCAGTTGTGG GTTATGTTTGGTCCCCAGACTTTCTAAAATTCGTTTTCTTCAACTCCGCTTCTTTCTTCTTTTCTCTCTGTGTACTTTTG ATTCTCATTAGCGGGTTCCCGCTGGGGAATAAGGTCATCATGTAG
Protein sequence (LotjaGi1g1v0700500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEIFAADPNQQDETMRELYDASLNGCVSTLKTLIQRDPLILNRVPLYPFTETPLHIASLLGHTEFCHVLLDMNPSLAGEV NSEGRYPLHLASAKGHTEIVKALLLTNSGICLIRDKDDKLPLHFAAMRGRLGVIKELIRAKPHSVREMDENDDGSLLHLC VRYNHLEALKFLVESVRGDNQFLCTKDIEGNTILHLAVRRRQIKIIKFLLSLSEMRTALSTLNRVGLTPLDMLVNRPRDS IRLRIEHILTEEGAQSSPINDPPKCNGTPQPPHPSLSNDPPEPSQSSPSNNPTQPPSQSIDPLQPSPPSPSNGPTQPQPT QPSPSHDPPQTSPSNDPPQPPSPSNNPPQPQHPSPSNVLSQPPSPSPSIAANEQHESSRWDKFEKFCTTYLINQGYWIDG RTKETWMIAATVIATMTFQSVLSPPGGVWQADSTDGGYACKDYGFCEAGTAVVGYVWSPDFLKFVFFNSASFFFSLCVLL ILISGFPLGNKVIM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 464 | 464 | - | – | |
| Gene3D | 4 | 269 | 266 | 1.4E-37 | ||
| PANTHER | 11 | 485 | 475 | 4.8E-98 | – | |
| PANTHER | 11 | 485 | 475 | 4.8E-98 | – | |
| SUPERFAMILY | 17 | 236 | 220 | 3.22E-36 | ||
| Pfam | 18 | 106 | 89 | 6.4E-11 | ||
| ProSiteProfiles | 49 | 261 | 213 | 30.688 | ||
| SMART | 49 | 78 | 30 | 16.0 | ||
| SMART | 83 | 112 | 30 | 0.014 | ||
| ProSiteProfiles | 83 | 115 | 33 | 10.526 | ||
| SMART | 117 | 147 | 31 | 0.17 | ||
| Pfam | 122 | 211 | 90 | 4.2E-12 | ||
| SMART | 152 | 183 | 32 | 25.0 | ||
| SMART | 189 | 218 | 30 | 0.32 | ||
| ProSiteProfiles | 189 | 211 | 23 | 9.404 | ||
| MobiDBLite | 252 | 377 | 126 | - | – | |
| MobiDBLite | 264 | 290 | 27 | - | – | |
| MobiDBLite | 298 | 362 | 65 | - | – | |
| Pfam | 401 | 484 | 84 | 1.1E-14 | ||
| TMHMM | 464 | 486 | 23 | - | – | |
| Phobius | 465 | 488 | 24 | - | – | |
| Phobius | 489 | 494 | 6 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0700500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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