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Field | Value |
---|---|
Gene ID | LotjaGi1g1v0706800 |
Transcript ID | LotjaGi1g1v0706800.4 |
Related isoforms 3 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Phytochelatin synthase; TAIR: AT5G44070.1 phytochelatin synthase 1 (PCS1); Swiss-Prot: sp|Q2TE74|PCS2_LOTJA Glutathione gamma-glutamylcysteinyltransferase 2; TrEMBL-Plants: tr|I3S9J9|I3S9J9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0706800 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:127531967..127536443) extracted from Lotus japonicus Gifu genome v1.2.
TTCATTTCCAAATAGCTCGCGGCCCAACTTTTTCAACAGTTTTTTGCTCCGGTCATCTCATTTGAACTTAACCTCATAAA CATCTTCATCTTCTTAGCCTCAATAGCTTCTTTCAAACAATTGGTTAACCTCCTCTTGCCTCATGGTTATTTTGTCCAAT AGTTCCAACTCTTTCTCCTTAATCAAAATTTAAAAGTGATTTTGATTTTAAAAGCACTATTTAGAAGTAATTTAGAAGAA GCATCCATCATCCATAGAGAAATAGCGTGATTAGAACGAAGGAATCAGCTTTAGAAAGTAACAAGAAGAAGCAGAGTTGG TGACTTCAGCTTTGAATGCCATGGCGAGCGTAAGTCTATACCGCAGAGTCCTCCCTTCTCCACCTGCGATCGATTTCGCT TCGCAGGAAGGCAAGGTCAACTTCAACAACAACACTCTTCTCTTCTCTTCTCTTTGCTTCTGATCTGTGTGTGTGACTGC AATGCTAACAAGTCAACTGATTGTTTGGTTGTTTGTTTGCAGAAGATCTTTGTTGAAGCTCTTGGTCAAGGAACCATGGA GGGTTTCTTCAAGCTAATATCATTCTACCAGACACAATCAGAGCCTGCATATTGTGGTCTCGCCACGCTTTCTGTTGTCC TCAATGCCCTTGCCATTGACCCTGGTAGGAAATGGAAAGGTATGTTCTTTCTTTCTTTTTCTAATACCCTTTTGATTTTT TTAATGTTTTTCATTAAAGGGTAAGTGAAAAAATGGTAAAAATTTGAACTTGCTTAATAGGGCCTTGGAGATGGTTTGAT GATTCCATGTTGGATTGTTGTGAGCCCTTGGAGAAGGTTAAAGTTCAAGGCATTACGTTTGGAAAAGTTGCGTGCTTGGC TCGATGTAATGGGGCTAAAGTTGAAGCTTTTCGATCCAATGAGAGCACTGTCAGTGATTTTCGCAACCGTGTGATTTCGT GTTGTTCTTCTGAGGATCGTCATGCGATTGTGTCTTACCATAGGTCAGGGTTAAAGCAGGTGCGTGCGTTGAAGAAGATC ATTCATTCCTCTAGTTGTGTTATCTATTCATAAGTCATAAATGTAGTAGATTCAAGATCTTTTATATGTAGATTAGAGAT GCACAGGTTGTTGTGTAGGAAATGGAATGGTTGTGTTTATAGAAATGATGAATGTGTCATATTGTTGGTTAACAGACTGG AGAGGGCCATTTTTCACCTCTTGGAGGATATCATGCTGAAAGGGACATGGTACTGATATTGGACGTCACTCGTTACAAAT ATCCTCCTCACTGGGTTCCCGTTACCCTTCTCTGGAATGCCATGAATACCATTGATCGAGCTACTGGACTTCAAAGGGGG TAAGTTCTCATGAATTCTTAGTTTAAGTTAATAGTGTCTCTCATACAGTTTCGTCAGTACTATGTAGTCCTTACTGTTAT TTCTTTCAAATATGTTTCATGTTTCCTTTTGCTAAAACTTAACATTGCTATACCTTGTGCGATTATTGGAAAATGGCAAT ATCTTACAACTTATAAGGTTGTCATCTTAGGTGATGTTCTTTCTTTTGATTCAAGTTTATATACTTCTCAACAATATATC TTGGCATGCATGCTATGTTACAAAGAACTAAATCACTGTATATGCCCTAGAATATTGCCATGAAACAAAAGAATCAGATT TTTCTTTTAGTTTGTGAAGCCTTTCCGATTAATCTTTTTGCTCTCCATTTATATTTCGACATTGTGGTATTTCAGGTACA TGATTATTTCAAAGCTTAACAGGGCACCATCAATACTTTATACTCTGGTACTGTACTACTGGTTGATTCACTGTCAAACC GAAAACCATTGGAGCACATAGATCAAGTTTATAAAATTCATGAATTTTAATTGGAGAGAATAGTAATTTGACTCACTGTA AAACTATCATGGTTATGTCAGCTGGAAGACAGTTTTTTTCTCTTTAAGTTCCATTAAAACTTAACCCTCCGTAGATAATG TTAAAGGCATGTAGTGTCATTGGGAGGTCAGGGATCCTGCCCCGTATTCTCTCTCTTTTCCCCTCCCTGTAGAAACTGTA ATGGTTGAAGCTGTGCATTATTCTAAGACCTAAGTTAACCAGAACATATTTATTTCGATGGTTACTCTGCTTATGCTTCA TGCAAATAATTTGTCCTTGTAGAATAAGGTAAATACTCACTTTGGACTACATACAGAGTTGTAGACATGAAGGTTGGAGC AGTGTGGCCAAATTTCTAACTGAGAATGTCCCTCTCCTTCTAAAGTCAGAGGATCTAAAAGACATCCAGGAAGTACTCTC TGTTGTATTTAAATCTCCTCCTAGTGAATTGAGAGAGTTCATCACATGGATTGCTGAAGTTCGCAGGCAAGAAGATGGGA ATCTCACTTTGAGTGAGGAAGAGAAAGGAAGGCTAGTGATCAAGGTTTTGAAACTCCTTCCTTTTCCATTTTGGGAAGAA AAATCATTTCACTCTTGAATTTGATAAATGTGTCATTTATGTCATCTTAGACTTCATCTCATTGAAGAAAATCCCATAAA GGAACAACCATAATTTTTAGGAGCTTTGAAATTTCAGGCAGAAATACTGGAAAAGATTCGGACAGCTGGGCTCTTCAAAC ACGTGACCAGTTGGTTGGATTCACAACGGTCACGCTGCAGTACTATTGCAAACCTTCAAGACAAAGATATGCTACCAGAA CTCGCTGCACGTGTTTGTTGCCAAGGGGCGTGCCTTTTGACTGGTTGTTGTTTGTCAGGTGGAAAATGCTGTTGCCAAAT AGATGTGAAACATCTGAATGTTGATAGTAAAAATCTAGCAACAACATTTGTTTCTGGAACGTTTACAACTGGAAGCAGTA GTGAACAAGGAGTTGATGTGTTGGTCCCCTTGTGTCAAAGAGGGCCAGAAGGTCACTACATTGCAATGCATCCTTCTACT GCAGATGTCTTAACAGTGCTTTTGTTGGCCTTGCCCTTGCATACATGGTCCGGCATTAAAGAAGAAAAGCTGCGTGCGGA AGTTACAAGCCTTGTGACAACTGAAGACCTCCCTTCCTTACTTCAAGAAGAGGTAATACTCTATATGGAACCAGTTTTAC AGTTTTTTTAAGTATAAATATGAAAAAATATCTTGATGAAGAAATGGACAGCAAAGTACTTACTCACAATAGTTAAAACT CACAATAGTTTTTCTTTACCATTTTATTGATGTACATATTTGCCTATTTGGCCCAGAATTCTCCAAGTGTACTTACTTTC TTCAGTACTCTATTTTCTAGTTATGTACTCCCTCTGTTCCCTATTATAAGTCACATTTTTTGAAAAAAATTTGTTACAAA ATATAAGTCACTTTCTAATATCTAGGAAGCATTAAATAATTTTTTCCAAGTTCACCCTCATATTTAATATGAAAGAGATG ATAAACTTTAGAAGTATTAACTTAGAGAGAGAAAATCATAAGAAAGTAAATAAGGGTAATCTAGGAAAGTAAATCATTTT TTTTTACAAATTTATTACTAGTAACTACTTTTCTTAATCTAAGAAAATTAGCTATTTGTGACTTATATATAGGAACGGAG GGAGTATTTATAGCCATCAAAATCTTACCCGTGGAGTCGATACCATGGTTTTAAATTCAATACTTTCAGAGTGAATTCAT GACAAAGACTTGAAGAGAAATTAGTAGCTTGGAGGAAAATGTTATTATTATACTAACTGGCTAAGCTAATATCATGCGTT GGTGATACTTAGAACTATTCATTGAACAGGTGTTATTCTTGCGAGAGCAACTCCATTTTCTCATGACTGAGATTGGTTAT CCTTCTCACTGATGATGCTCAATGGTTTTGGCTAATGTAACGGCTTCCTGTATTAGACCCTGTTGTAGCATCAGTTATGT CATTGAACTTGGGATGAAGACAGCTAAGCATGTGTGATGGGAAAAGAGGAGAGATAGAAACAAAAGAAAGAGTGAAAATG GGATGGAAGGTAAAGTGCATGTGAATATGTCAAAGTTGTAGTCTTGTAGATAATAAGATCCTTAGATGAATTTTATAATC AAAACATTTGAATGTGTAGGATTGGATTTTAGATGAATCTTAGTGAGTGTTTTTCTGTTTTAAGATAATGTAATTTATTT TCTCTTTATACATAGAGAAAATGTTGTAATTTCTTCCACTTAATGAAGATATTTTGTTTATTGTTGTCATAGTTTTTCTC TTATCTATGGAGAGTTTTCCATAAAATATGGTGTGACAATAATGTTGCCAACTTGCACCCAGCATTGAAACTACATTTGA AACTTATTGGAATCCATGTCAGCTTCATTTGAAACTAATATGTGAGTGCATCATTATATCCACAGGGCACGCACAGGCGC ACACTAGTGGCCTGGAGCTCAGATTTGGGCGATGACTAAAAATAATTATTTTTCCCCTTCTTTTATACACTCTACAT
CDS sequence (LotjaGi1g1v0706800.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGAGCGTAAGTCTATACCGCAGAGTCCTCCCTTCTCCACCTGCGATCGATTTCGCTTCGCAGGAAGGCAAGAAGAT CTTTGTTGAAGCTCTTGGTCAAGGAACCATGGAGGGTTTCTTCAAGCTAATATCATTCTACCAGACACAATCAGAGCCTG CATATTGTGGTCTCGCCACGCTTTCTGTTGTCCTCAATGCCCTTGCCATTGACCCTGGTAGGAAATGGAAAGGGCCTTGG AGATGGTTTGATGATTCCATGTTGGATTGTTGTGAGCCCTTGGAGAAGGTTAAAGTTCAAGGCATTACGTTTGGAAAAGT TGCGTGCTTGGCTCGATGTAATGGGGCTAAAGTTGAAGCTTTTCGATCCAATGAGAGCACTGTCAGTGATTTTCGCAACC GTGTGATTTCGTGTTGTTCTTCTGAGGATCGTCATGCGATTGTGTCTTACCATAGGTCAGGGTTAAAGCAGACTGGAGAG GGCCATTTTTCACCTCTTGGAGGATATCATGCTGAAAGGGACATGGTACTGATATTGGACGTCACTCGTTACAAATATCC TCCTCACTGGGTTCCCGTTACCCTTCTCTGGAATGCCATGAATACCATTGATCGAGCTACTGGACTTCAAAGGGGGTACA TGATTATTTCAAAGCTTAACAGGGCACCATCAATACTTTATACTCTGAGTTGTAGACATGAAGGTTGGAGCAGTGTGGCC AAATTTCTAACTGAGAATGTCCCTCTCCTTCTAAAGTCAGAGGATCTAAAAGACATCCAGGAAGTACTCTCTGTTGTATT TAAATCTCCTCCTAGTGAATTGAGAGAGTTCATCACATGGATTGCTGAAGTTCGCAGGCAAGAAGATGGGAATCTCACTT TGAGTGAGGAAGAGAAAGGAAGGCTAGTGATCAAGGCAGAAATACTGGAAAAGATTCGGACAGCTGGGCTCTTCAAACAC GTGACCAGTTGGTTGGATTCACAACGGTCACGCTGCAGTACTATTGCAAACCTTCAAGACAAAGATATGCTACCAGAACT CGCTGCACGTGTTTGTTGCCAAGGGGCGTGCCTTTTGACTGGTTGTTGTTTGTCAGGTGGAAAATGCTGTTGCCAAATAG ATGTGAAACATCTGAATGTTGATAGTAAAAATCTAGCAACAACATTTGTTTCTGGAACGTTTACAACTGGAAGCAGTAGT GAACAAGGAGTTGATGTGTTGGTCCCCTTGTGTCAAAGAGGGCCAGAAGGTCACTACATTGCAATGCATCCTTCTACTGC AGATGTCTTAACAGTGCTTTTGTTGGCCTTGCCCTTGCATACATGGTCCGGCATTAAAGAAGAAAAGCTGCGTGCGGAAG TTACAAGCCTTGTGACAACTGAAGACCTCCCTTCCTTACTTCAAGAAGAGGTGTTATTCTTGCGAGAGCAACTCCATTTT CTCATGACTGAGATTGGTTATCCTTCTCACTGA
Protein sequence (LotjaGi1g1v0706800.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASVSLYRRVLPSPPAIDFASQEGKKIFVEALGQGTMEGFFKLISFYQTQSEPAYCGLATLSVVLNALAIDPGRKWKGPW RWFDDSMLDCCEPLEKVKVQGITFGKVACLARCNGAKVEAFRSNESTVSDFRNRVISCCSSEDRHAIVSYHRSGLKQTGE GHFSPLGGYHAERDMVLILDVTRYKYPPHWVPVTLLWNAMNTIDRATGLQRGYMIISKLNRAPSILYTLSCRHEGWSSVA KFLTENVPLLLKSEDLKDIQEVLSVVFKSPPSELREFITWIAEVRRQEDGNLTLSEEEKGRLVIKAEILEKIRTAGLFKH VTSWLDSQRSRCSTIANLQDKDMLPELAARVCCQGACLLTGCCLSGGKCCCQIDVKHLNVDSKNLATTFVSGTFTTGSSS EQGVDVLVPLCQRGPEGHYIAMHPSTADVLTVLLLALPLHTWSGIKEEKLRAEVTSLVTTEDLPSLLQEEVLFLREQLHF LMTEIGYPSH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 1 | 487 | 487 | 1.8E-231 | – | |
ProSiteProfiles | 1 | 221 | 221 | 49.135 | ||
PANTHER | 1 | 487 | 487 | 1.8E-231 | ||
Pfam | 7 | 216 | 210 | 2.0E-89 | ||
SUPERFAMILY | 13 | 217 | 205 | 4.12E-78 | ||
Gene3D | 16 | 221 | 206 | 2.8E-83 | ||
Pfam | 221 | 478 | 258 | 2.5E-102 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Biological process | Response to metal ion | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a metal ion stimulus. | ||
Molecular function | Glutathione gamma-glutamylcysteinyltransferase activity | Catalysis of the reaction: glutathione + Glu(-Cys)(n)-Gly = Gly + Glu(-Cys)(n+1)-Gly. | ||
Molecular function | Metal ion binding | Interacting selectively and non-covalently with any metal ion. | ||
Biological process | Phytochelatin biosynthetic process | The chemical reactions and pathways resulting in the formation of phytochelatins, any of a group of peptides that bind metals (Cd, Zn, Cu, Pb, Hg) in thiolate coordination complexes. The structure is of the type (gamma-glutamyl-cysteinyl)n-glycine, where n is 2 to 11. |
Expression pattern of LotjaGi1g1v0706800.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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