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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0711800 |
| Transcript ID | LotjaGi1g1v0711800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Kelch repeat F-box protein; TAIR: AT4G03030.1 Galactose oxidase/kelch repeat superfamily protein; Swiss-Prot: sp|Q0V7S6|FK125_ARATH F-box/kelch-repeat protein OR23; TrEMBL-Plants: tr|K7KFD6|K7KFD6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0711800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:127986132..127991305) extracted from Lotus japonicus Gifu genome v1.2.
AATTGATAAAAAAAACCTTCAAAAAAGTAAAAATGTCTTGTCGAATACTCCACTACACTATCTTGACAAACAAACAGAAA AGATAGCATAAAATCAATGCCCAGCGTTGACAGACAGACAGACACACACACACACAAACAAAAACCATGAATTCCGATTC CGACTCCGATCCTCTTCCTACGACGGACGACACGGCGGCGATTCTAATCCCCGGCCTCCCAAACGACGTCGCAGCCTCGA TCCTCTCTCGTGTTCCCTATTCCCACCACGCTCGCCTCAAATCCACGTGCAAGGCATGGAAAACGGTGCTCTCATCGAAC CATTTTCTCCACTCCCTCAAACGCAACCACCTCCTCTGCATCTTCCCGCAAGACCCTTCCACCGCCACCTCCTACCTCTT CGACCCGTCCGAGGTCGCGTGGTGCCCCCTCCCTCCCATGCCCTGCAACCCCAATGTCTACGGCAGATGCAACTTCGCCG CCGTGGCCTTCGGCGCACACATCTACATCCTCGGCGGTTCGCTTTTCGACGCGCGCTCTTTCCCCATTAACCGCCCCTCC GCTTCGTCGTCCACTTTCCGGTTCAATTTCTGTGACTTTTCATGGGAGCACCGTGCGCCTATGCTCTCGCCGCGTGGAAG CTTCGCCTGCGCGGCGCTTCCGTCGACCGGGCATATTCTCGTTGCCGGTGGTGGGTCCCGCCATGTTATTTTCGGTGCTG CCGGGTCGCGTATCCGGTTTGCGGAGCGGTATGATGTGGAGAGGGACTGCTGGGTTGCGGTGGATTCTCTGCCGGACTTT CGGGCGGGGTGTGTTGGGTTTGTGGGTGGGGATGGGAGGGAGTTTTGGGTGGTTGGTGGGTACAGTGCGTCGAGGACGGT TTCCGGGGTGTTTCCAGTGGATGAGTATTGTAGGGATGCTGTGGTGATGGGGTTGGAGGATGGGGCGTGGAGGGAGGTTG GAGATATGTGGGGTGATGGTGAAAGGATTAGGGCTGGGAAGATTGTTGTGGTTGATGATCATGGCTGCCCCGCGGTTTTC ATGCTTGAAATGAATGAGATTTTGAGGTACCTTCTCATTTTATGCTTGGTTAATTAATGGTTTGCTAGTGGTTTATGATT GTGCATTGCATTAGCATTGCCTTCATATAATGCACTGATTAACTTGGCCTTCATGTAATGGTTTTTGTTGATATGGTCTG TGATGTTATGACTTATGAATGAAATACTGTGATTATGCATGTGCTTTTGATTATAACATGTTTTGATCAGTTTCCCATTC CTTGTAATCAATCATGAAACCCAAAAGCTACTCATAGAAGTTTTTCCCCTGAATTGATTCTGGTTTATAAATCAATCATA GAATGATTTCCAAACATGCGCTGAGTTATCACTAGGAAGATGTATATGATGTGCATTGGCTGTCCGATTTGTTTTGTTGA ATCTTTGTGCCTTGTAAAGATAGGCTGGTTAACATACTAATGCTAATGAGGAACCATTCTCTCTGCTATTTCGGTTTGTA GTTTTGGTAATCCATTGTTGCAAAATTGAAATACACTGTTCTCAAAAGCAAAAGTTTAACATGCACTTTGTTCCGTGCAT GGGAGCTCATTCCCTTTTTGTTAAGCTTGATCCGTTATCATGTCATAAATCTTAATCTTAGATTCTTTTCTTTATTAGAA ATTCATTTTAGATACTTGTTTGCTGCATATTAGTTAAAATCATATTCTAGGTAGTAGGATCACAACATCTTTTGATTATA TGTCGCCAAATTGTGAGGCAGAGCAAAAGAACTTAATTCAGCCCACTCAAGGTTTCGCAGACCACCACTTTAACCTCCCA GTCCAATGAACTCAAACCTAATCTCATTCTCACCCTTCTCCTCTGAAAACCATCTCCCTTCTAGGGGCTTTGAAATCTGT GATGGAGTGGAGCCTTGGCTAGGCTATGGTTCTAATTAGAACCTTCATCTTAGATATGGAGGATGCTTAAGATGAGTGGT GCAGCTTTGACGGGGATGTGAATACTTCGGCTTGGACTTAGTATGCACTATGCAGTTTGTATGCAGTTTTTGAGTTCCCC TGTTTTATGATTTGTACTTTTTTTTTTGTCTAGTACTACAATTGTTCTCTGCTGGGCTTCCTGGTTTTTGTGACTTGCAT TAAATGTTTATTTTCCTGCTTGTGGGTGCTGATTGTGAACTGTTATTTTTTTTCCCCATGTCATTTACTTATGCTTGTCA GTTTATCTCTGGTGTATCAGAGTTCACTGTTTTATTATAAAGTTTTTATTCAATCTAAAATTCTAACATCTATTACGCAT TTTGAAATAGAATATATTTGAATTTTAGTTGTGATAGTGATTTTATTATTATGAATCTTTTGACTTAGTTGCATTTTCAG TCTCTTCACTATAAGTCCATAACCAATGTGTGATTTTAGTCCCCCTATACATTTTTGCACAAATTTGATCCCTTGGTTTT AGATTGTTACTATTTAAGCCTCTTAATCACTTTCCTTCTACTTAAAACACTCAAGTTCTTATGTTTTGTTTACTTGAAAT TTTCACAACAATAATCGGTTAAATCATTTTAAACCTTCTTTTGTTCAAAAATCACCAACTCAAATTTTACACCAAAAAAA AATCCCGAATTCCTCCCTCTTTAAACCCTATCTTCACATCCTACAAAATCCTTCAAATTTTATCAAAATTTCACTAACTG TATAGTTTCTCACCTTTGAAATCATTTCATATTCCAATTACATCGTAAATCCCCTAAATATTTGGATAGAAAATGAGAGA TGAGGGTGTAATGTAGAAGAAAACTGATGGCAGGACTTATTTGCTCAATTCTAACTATAAAGGGATTAGATTTGCTCAAA AAGTTGAGGGACTAAAATTGCACGTAATCCAAGTTAAAATGATCAGAAGTGCAATTAAACTGTATTTATGTGTGTTATGA TCTCATTGTTGCATTCCTATCTTCCTTGTCCCATTCAATGTAGGACCTTTGTGTTTGTCAACCTTGGTTTCATGTACACA AATCTGAGTGTCATATAAAACGTTTAGTCAGTCCGGTTGAAGTTTAGGTGATTCCAAGGAGCATTCAGTTAAACTCTGAT TTTACCCAGTGTCCTGGTGTACAAGTGTTGCACATTTATAGGAGTTGACATACCTCTCCCTTGTGAATACGAGTTTATAG TTGCTTACAGCTGAAAATAACAAATAATGGGAGAACAGATTTAGTTGTTGGAGATTATTGTCCCTAGATAGACATCCTTG TTATTTCAGCAGCCCTGGTCTTCTGTACATACCAGGAGTCCAGGACCTGGATCAGTGGTTGGGCAGCTGTGGGTTTTGTT AGGGTTGTAGTCTTGCAGAGGTCTTGGGTATGAGTCAAGATATTACAGAAGGTTAAAGGTTGGACTACTTACGTCTTGTT ACCGCTTAGTATCTAGGTGTCTTGTTTTGCAGCAATAAGTGTTATTTGAGATTCCTGCCTCTTGTTTGTCAATCACATGG TTTATTAGGGTCCATTTGTTTTAAAGTCTGGTAGGATTACTTTTGTGAGAACGAATGTATTTGAGAATATGATATTTTAA AAGTAAGATTTAAAAAATATATGTTTGGATAGAATAAAGTGAAATCATTTGTAGATTAACATGAATGGAGATAATAATGA AAGAAATAAACTATGGGTATTACAATAATTAGACTTCTAAACTGAATTTTGTTGATGGAAAAGTATGAAAGTCTTTTAAG ATACCTCTAACTTACTTTAAGTGGCTGGGGCATAAGTTTGGCCACCCAGACTTTAATTTAAACAAACACTTGAGCATTCA GTTTGGTGTAGAAAATATATATGCTTATGTGAATACTGTAGTGTGAATTGTAAAATGTGTAGAATAACATACTTGGATTG GATGTTTGTAAAATTTAAATAGATATGCCTTAGAGTTTTAGAGTGGCTTGGACATGAAGCACATGAAATTCTTAATTATG ATGACCAGGTGCTGGTATGTAGAGTAATAGTAGTTTATGACAAATGCCATCTCCACCTCCCTCCTCCATTCTTAATTATA TGCACGCATCCTAATTGACCTATGTGCTTTTGAATTGTTTTCCTTCATTACAATCCCCTGTATTATATAAATGGTAAAGA TCATGCAATATATACAATTGAGAGGATTCTAATCCATACAATGTGTGTCTGTACGGTATACAATAGCGGCAATGAGGTTT CACCCATGTTTCATGTAAATTACCCAATATTCTCACCACTAGCTCAAACTGTATAAGATTGCCTGAACCTCTTCCAGTCC TCATACATAGTAGAGATCATGCAAGATTCTTGGTGGCTTTGCTTACTTTCTTGTATATTACAATTCCTGAACTTACGAAG TTGCAAATCTCTATTTGGTTTTTTTTTAAATGATGATGAATTGATGATGCCTTGCAGATATGACATGTCTTCAAATCGAT GGCTATTCGAATCTCGCGTGCCAAGAAGAGCTCCTCACAGTTCGCCATTTGGTTTTGTTGCAGTCGAGCATGAGCTGTAT ATATTGACACACTCATACGATGATGATTACTTTAGAACACGAAGGTCCAGAAACTCTAAGAGGACTGGCACCATGATTTT TCAAATCTATAACCCGAAGAAGAAGACATGGAGAACTCTTGTCACAAAATCACCTTTCACATACCCTGTAGATATTAAGA ATTCCGTATTGAGCTCAATCTGTCTATGAACTATGGGCCATCACATTTGAATAGTATAGGAATCTCTGCCAAATATCATT AGACCACCAGGTTCCATACAGGTTGCTTATTTGTATATTTCTGTATCTAGTACTTAAGTCATTGAACTGCGTATAGCACA TTCTATACTAGCTGATACCATCTGAATTGGCCAATTGATCAGCTATTACTAAGGTGTAGTTAACATTGAAGTACTGAATA TTTGCAATGGATAAACTATAAAGTAATGAATGTAAAAATTGTTGCTTGATTTCATTTTATACTGGAGATGTATTAGTACT GAAGGCGGTTGTTTCAATCACACATTCCCAGTCACATCCACTTAACAGGACAACTAAATTCAGATGACACGCTCTATCAA AATTGGACTGGGCCAACCACCTTGAACTTTGTATTTTTCACAAATTAACAGCTT
CDS sequence (LotjaGi1g1v0711800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAATTCCGATTCCGACTCCGATCCTCTTCCTACGACGGACGACACGGCGGCGATTCTAATCCCCGGCCTCCCAAACGA CGTCGCAGCCTCGATCCTCTCTCGTGTTCCCTATTCCCACCACGCTCGCCTCAAATCCACGTGCAAGGCATGGAAAACGG TGCTCTCATCGAACCATTTTCTCCACTCCCTCAAACGCAACCACCTCCTCTGCATCTTCCCGCAAGACCCTTCCACCGCC ACCTCCTACCTCTTCGACCCGTCCGAGGTCGCGTGGTGCCCCCTCCCTCCCATGCCCTGCAACCCCAATGTCTACGGCAG ATGCAACTTCGCCGCCGTGGCCTTCGGCGCACACATCTACATCCTCGGCGGTTCGCTTTTCGACGCGCGCTCTTTCCCCA TTAACCGCCCCTCCGCTTCGTCGTCCACTTTCCGGTTCAATTTCTGTGACTTTTCATGGGAGCACCGTGCGCCTATGCTC TCGCCGCGTGGAAGCTTCGCCTGCGCGGCGCTTCCGTCGACCGGGCATATTCTCGTTGCCGGTGGTGGGTCCCGCCATGT TATTTTCGGTGCTGCCGGGTCGCGTATCCGGTTTGCGGAGCGGTATGATGTGGAGAGGGACTGCTGGGTTGCGGTGGATT CTCTGCCGGACTTTCGGGCGGGGTGTGTTGGGTTTGTGGGTGGGGATGGGAGGGAGTTTTGGGTGGTTGGTGGGTACAGT GCGTCGAGGACGGTTTCCGGGGTGTTTCCAGTGGATGAGTATTGTAGGGATGCTGTGGTGATGGGGTTGGAGGATGGGGC GTGGAGGGAGGTTGGAGATATGTGGGGTGATGGTGAAAGGATTAGGGCTGGGAAGATTGTTGTGGTTGATGATCATGGCT GCCCCGCGGTTTTCATGCTTGAAATGAATGAGATTTTGAGATATGACATGTCTTCAAATCGATGGCTATTCGAATCTCGC GTGCCAAGAAGAGCTCCTCACAGTTCGCCATTTGGTTTTGTTGCAGTCGAGCATGAGCTGTATATATTGACACACTCATA CGATGATGATTACTTTAGAACACGAAGGTCCAGAAACTCTAAGAGGACTGGCACCATGATTTTTCAAATCTATAACCCGA AGAAGAAGACATGGAGAACTCTTGTCACAAAATCACCTTTCACATACCCTGTAGATATTAAGAATTCCGTATTGAGCTCA ATCTGTCTATGA
Protein sequence (LotjaGi1g1v0711800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNSDSDSDPLPTTDDTAAILIPGLPNDVAASILSRVPYSHHARLKSTCKAWKTVLSSNHFLHSLKRNHLLCIFPQDPSTA TSYLFDPSEVAWCPLPPMPCNPNVYGRCNFAAVAFGAHIYILGGSLFDARSFPINRPSASSSTFRFNFCDFSWEHRAPML SPRGSFACAALPSTGHILVAGGGSRHVIFGAAGSRIRFAERYDVERDCWVAVDSLPDFRAGCVGFVGGDGREFWVVGGYS ASRTVSGVFPVDEYCRDAVVMGLEDGAWREVGDMWGDGERIRAGKIVVVDDHGCPAVFMLEMNEILRYDMSSNRWLFESR VPRRAPHSSPFGFVAVEHELYILTHSYDDDYFRTRRSRNSKRTGTMIFQIYNPKKKTWRTLVTKSPFTYPVDIKNSVLSS ICL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 5 | 403 | 399 | 3.6E-186 | – | |
| ProSiteProfiles | 18 | 64 | 47 | 9.18 | ||
| SUPERFAMILY | 21 | 102 | 82 | 1.7E-9 | ||
| Pfam | 21 | 60 | 40 | 1.9E-5 | ||
| SMART | 24 | 64 | 41 | 6.1E-4 | ||
| Gene3D | 61 | 393 | 333 | 2.3E-31 | ||
| SUPERFAMILY | 73 | 381 | 309 | 3.79E-36 | ||
| Pfam | 107 | 159 | 53 | 9.0E-6 | ||
| SMART | 118 | 173 | 56 | 0.73 | ||
| SMART | 176 | 229 | 54 | 0.8 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0711800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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