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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0713200 |
| Transcript ID | LotjaGi1g1v0713200.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | E3 ubiquitin protein ligase DRIP2; TAIR: AT2G30580.1 DREB2A-interacting protein 2; Swiss-Prot: sp|Q94AY3|DRIP2_ARATH E3 ubiquitin protein ligase DRIP2; TrEMBL-Plants: tr|A0A151SJ31|A0A151SJ31_CAJCA Polycomb group RING finger protein 1; Found in the gene: LotjaGi1g1v0713200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:128130641..128136922) extracted from Lotus japonicus Gifu genome v1.2.
ATACGTGAGACTGAGTGAGCGAGAAGCAGAAACAGAAGAAGGTGAACCATGCCGAATCCGGTGGTGAAGGTGAGGTGGAA CACGATTGCAGCATGCATGACTTGCCCACTCTGCAACAAGCTATTCAAAGAAGCCACTACCATATCAGAGTGTCTTCACA CGTGTAAGCATCTTCGATCTCCTTCAAATCTCCTTCATTTCTCTCAATCCCTTGTTAAATTTCCCAAATTTTGAGTCGTT TGTGAGTTTCTGCGTTGAGTTATCGCGTTTTCCATCTGGGTTTTACCTCTTTTGACTATTCACCCAGATGGGTTGAAAGG GGGAGGAAGATGCATCTGGTCTTTGCGTAACCAGAGAGATTCAATGGTTTTTTTCGTAATTTGATGCTTCTGAAAAAAAA TTCTTTTTTTCTTTTTTCATTTTTTTTCCTCTCTTTCTCTCTCTATGAACCTTTGGAGGACGTGAATGCTGGTCAGAACT CAGAAGCATTATGGTTCAGATTGGCCAACTATTCAGGAGTTGAGTTATGTTGTGTTGTGCACTTGAGCTGTTTTCATTAA TGTTCTAAGTGAAAAAGGTGTTTGAACTTTTGACTACAATCACCACTGTTCATTCTTTCTTCCACCAAGCTAGCATCAAT CCTAGTCTTAGCATGCAAACATAACTGTCGTGGCAGAAACCAAACCAAGCACATTAATATTAGCATTTTGTTTCTTACAT TTTGGCTGGTGGAGAATAGTTATATTGGTGTTTGTTATCTGTCCTAATTTGAAGTTAATTGATGGTCTAACTAGCTATCT TTGTGTGTACTTTTTTCAGAAGCTTTAAGCAACGTGTATTGTGTGCCCCATCTGACTGATTTTTTTTTTCTCTGTCATTT GTGGACTTTATGCAGTTTGCAGGAAGTGCATTTATGATAAACTTTCAGATGAGGAATTGGAATGCTGTCCAATTTGCAAC ATTGATTTGGGCTGTGTTCCACTTGAGAAACTGAGGTAATTAGACCCCTGCCTTTGACCAATTCCAAATTAAAATAAAAA GAGAATGCCCCTTTAAGTTGTTGAGTATGCATGTGAGGTGTTGATCTAACTTGGTATGCAATGGCAATAAGAGTTTATGT TTTGCAGCATGTCCTAATTATTGTGCTAAGGCTGCTAAAATGGAGATATATTACTATACAAGACAGAACCTTCCTTTTAT AAATGAGTTAAATTGTTGATGTTGTTTATGATGCATTATAAAGCTGTTGAAAACTGTTGATCATTCGAAATAAAAGCTGT CATAGGTCACATTGTAACCAGATTTTCTTATGCTGATGCACTGACCTACAAGAACGAGGAGGGTTTATGTTATGATGATG CTATCAAGATTTTAGTTGTATCAAGTTTGTTGCTTTAGGAAAAACTAAGTTAAGAAGGATCTACTCCCTGCTTGAGAAAT TGTCATAATAAAAAGCCTTCAGTTTGACACCTTTCAATAATTTAGTTGATATTTATATGTAGTAATGCTCGTAGAATAGT TTTTCTCACAGATCTTTGATATGTCTATTTATATATAGCACAATAAATGTGAAATGTTTTCAAGAGATATGAAATAAAAA TTTAAAGTAACAGTAAATGGTAACTATTATGTTTTACTGGCAGAAGATTGCATTTAATAAATTTTTAATTGATCTTTTAG TTGAAAATAGAATATGGAGGAATAGAGTAAACTGGTCCTAGTAGTCTAGTACAGTTAAATGATGAAATGACTTGACACAG ATAAGATGGGGATTATCACCTGTTTGATTCTAGCCCAATTGGTGATATTGTTGTTTGCTATCCTTGTCCAAATTTGATGT ATTATCCAGTTAGCAAAGGACCATGATCATAAAAAGCAGAAAAAATCTGGACTTGAAAATATTTAGTGCTGAACTTGTGC CAAAGAATAGGCGTTATGATCATTGACCTGGTGAGTTTTGTAGAGGTAAGTGGAGGAGTAGGGAGTACTCTAAACTATCT GAACAGAAGTAGACCAGGAAGATAAGTTTTCTTTGAATAGTTCACCTGCATTGCTCTTCTAGATATCAGCCTTCGGTAAT GGACAGATCAAGTATTTCAAAGAACACAAACACACAGATATTTATATTCTCTTTTGAATTGTCAAATGCTAAGTTACAGA CCTTGGTTTCTGATTACCAGGCCAGACCACAATTTGCAAGATATGAGGGCCAAAATTTTCCCCTTAAAGGGAAGAAAGGC GAAGGCACCTGAAGTTGCCCCCTCAGTACCATTACCCGCTAGAAGAAAGGAGAGATCTCTTTCGTCTTTGGTGGTGATCA CACCAAGGGCATCCGCGCAGGCAACCATGACAGGAAGAAGAACAAAACCTACAAGAAAGGCTAGTGGTCTGCGGTCCTCT AGTTTTTCCATCGAAAAGCCCATTAAAAAAGAGGAAGTATCAGGAGATCATCCTGAGAGTTCAAGCTCGCGGGACACTTC AAATAAGCTTCCTCAGAATACTGAACAGGTTAGGAAAGACAATCTAGCTTTCTCTTTGAGCCCTTGATACATTGTTCTGT TTCCTTGTTATATTATTTGTTTCCTTTGTTCTTTCTATATCCCAGGTTGTATTGCCATTTGTTTACTTATTACTTATACT CTTATGCTTGGATATTTTTTTTTGCTGCAGAGTTCGTCACCTTGCGGCGGTAGTCAATCCAAACCCAATAAAGAATCAGA GAATAGTGCCGAACCGTGGGATGCAAAATTGGATCTTTGGAAACCTTTGAATTTTTTAGTAGAGGTTGCTAGTAGGAGTA AATCTTTCAAGTCTAATGCGCAAGGGTCTGATGCTAAGCTAGAACCCATTCCAGTAAATGAGAGTGACTCTCAAGTGCAG AAAACCAAAAATAAGGAAAATAAACGCAAGGCAAAAGTTGAGAATGAAAGGATTAGCCCTCATCTTGTCTCTTCAGATAC ATCAAAACCTAATAAGTTGCGCAGAATACGGAAGAAAAAGGAGCCTGCTCTTGGGGAATCAGGCATATCACCCCAAGCTG TGCTGCATTCTTCGAGCAATAAACTCTTAAGGGATGGTCCAATTTGGTTCTCCTTAGTAGCTTCTGAAAACCAGTGAGCT ATCATATCTCTGAAACTTAATAACTTGAAATCCTGTGCATCTTATATATGTTCTAAAATTTCTTTTTACCATATTTCTGT GAACTAATTTCAGACTAATGTTTTAGGGAAGGAGATGCACCTTTGCCCCAAATTCCTTCAAGTTATGTGAGAATAAAGTA AGAGCCTTCAGACTCTCTAAATCTATTGCAACTGTTCATTACTTATAGTTTTGATTTATTCCATGCTGTAGAGTAGGAAT ATTATGCTTGGAGCAATGTATAACACCATACAATACTGAATAATGTATTTTTATTTCAAAATGAAGTGTGTGTGTATTAC ATATATATATGTGTGTGTGTACATATATATATATATATATAGAGAGAGAGAGAGAGAGAGATATATAGATATATGTATTG TATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATAAGATTGAG AAACAACCCCTTTCAACAGGGTACAGTAACCCGATCAGCAAAAACTGATATAAACCCAGCCCCTACAGAAAAACCTCCCG AAAACCCTATAGTCTGCACAATACTGAATAATGTATTTGTCCATCTCTGTACAGTTTGTCATGAATATTCATCTCTTAGT TAAGGCTATCTCCATATATTTAATCTAAAGCAACATATTGAATGACAGTAAAAGAAGTCAATCACTTTGACCTTTCATTA ATTGTGCTTCAGCATCATGACAATGTCATAGCATTTCATCAATCTTACCAAGGAGAATACTTTTTTTTTATGGAAGGAGA ATACTTTTTTTGACATCTTATTTACTTATTTAATAATCAACTTATGCTATAGTAAAAAATATAAACAGTAATTTTAAAAA AATTAAAAATTAAAACACATCCAATGAATTCTGGAGTTGGGATGCTGAAAGATTCTTTCTGAACCTCTGTATTTTAAGAT AAGGAGAATGCTAATGAGTGCCCTTAGGGTACTAACTAAGGAAACAAAAGTACAAAATATTAATGAAAATTAATGCATTT ATTAAATTGAAAATGAAAATAATAATTTAATTCTTGCTTTTTAAAGAAATTGGAAGCATCTATAAAGTGTATTAAAGGCC ACTTAAGGGGGTCTATTTAGCAAGACCCTTTAGATAAACTGTAGTATAAACTAAAAATATTATCTCTATTGTCTTTCAAT TCTTCCACCATTGGAGAATTTCACCTTCATTGTTAGCCATTTAGATTCTAATGTTTACTCAAAGATCACTCAGATACACT TATCTTCTATATCTCACCTATTCCATATTATCCTAGTTATCTGTAATACTTCAGGTTGGAGGCCATAATTGGGTAGGTCT TGGGAATTGGGACCAGCCCCAATTGTTTATATTAACTTAATGTAGACTTAAATAACCTCTTCATTAACCTTTTGATTTTG TCTTCTTTCTTCATTTCAGCACAATGCAGACTAACCCTTATCCCTGTAGTAGGTAACATGATTAACATATCTGTTTACTA ACTTGATACTAGTCAGGGGTTGTCCAGATCAAGGAAATATATAAGCTAATATAGCATCATACAAATTAAAAAATGAAGTT CAATAATGGCCTATTTTATTTCTCCTCAAAGGAAAAGGGCCATGAGTATAGATAAATGACTAGCTGCGTGGATTTCAAAC AATGTGCGTGCTTTCAAGAAATCCACAATCATACTTAGATGCTTTTTAAGGTCTTCCCCATGAATCAATTAGCATATGAT TTCTCTCAATTAATTTCCTCTATTTCTGATGTGTTGTTTTTTGAAAAAAATCTTTGATGTCTCAAAGCCAAGGAATTAAA AGAATGCACATTTGTATGTGTTTTATCTAACTTCAGATTTCACATAAACTCTGCCAAGTCCTTACCTTCATGTGGGTGTA GTCCTCTTTTGAACCTTTAGAATAAAGTATTCCTATAGTCATTACATTTGCCCTAAGTTGGCTAATGAAGAGACTTACGA TTTTTCGCAATATATATATATATATATATATATATATCAACTGTATAGAATATAAATGAGAGCATTTAAGTGTAGTTTAT CAAAGTTTAGGCTTTCAATAAGGATTTTTGGATGTGATAGTGATTATATAATGCATCTATACCATGATAATCTGGGCTAA GAGTTTTAACTATCATGTTTAAATGGTTTCAACTAGCTACTAAATGACAGAAAAAGGTTTGAGAAACTATTTGAAGTTTT AACTCTACCTCTTATAAGGCTTCTTAAAATGTTGAGATCAATCTGAACTAGAATATGATATCTTGTCTAATATAATATCT CTTGTGTTTGCCACAGGGATGGAAGCTTACCTGTCTCATTTATCCAGAAGTACCTAATGAAGAAACTAGATCTGTCCAGT GAATCAGAGGTAATCCTCAGCTTGTAATATATGAAGATAATAAAAGAGGTTTAACAAAATTATGCTTGTGAGGAAAAAAA TTAATCTAGACAATAAAATCTTTCAGGCTCAGTTGTTCCATCTAAAAGACATTGGTTTGTTAGGGAACAACAGGACCTGG AAGAATTTGTTGTCTTTTGTTTAACCTCTTTCGTGTCTGCACTTCCTTAAAGCATCACAATTTGATTGTCCATGATTTTT TCTACTTTTCAAGCTCATGTCATGCTTATCAAGATACTGCATGTTTGGAAATCATTCTACGATTGATTCTGAACTTAAAA ATCAATTTTGAGTAGCTTCTGGGTTTCAGAATTGATTATGAGGAAAGAGAAGTTGATCCAAACATGCTTTACAGTATATG CAGTTCACTTTTATCACAACTTTAATTACATCGCTCATCTTTACAGTACATGATTCATACCAGCAACCTAGAATGACATC ACCCTTTTCATGATATTTTTTGTGCAGCATAGGGATGAAAACAATTTACTTTAATAGATCCTAGTTTGCATTTTGCTTCA TTCTTCATTTTAATTCAATTTGCAGGTTGAAATTAAATGTATGGGACAACCAGTGATCCCTACACTGCGGCTACACAATT TGGTCGAGTTGTGGCTCGATTCAGCAGCCTCCTCATCGCTCCGAATTCCAGCAACTATTGGGTCCTCAGCAAAGGATTTT GTCATGGTCCTGGCTTATGCTCGGAAGGTTTCACACCCTTGA
CDS sequence (LotjaGi1g1v0713200.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCGAATCCGGTGGTGAAGGTGAGGTGGAACACGATTGCAGCATGCATGACTTGCCCACTCTGCAACAAGCTATTCAA AGAAGCCACTACCATATCAGAGTGTCTTCACACGTTTTGCAGGAAGTGCATTTATGATAAACTTTCAGATGAGGAATTGG AATGCTGTCCAATTTGCAACATTGATTTGGGCTGTGTTCCACTTGAGAAACTGAGGCCAGACCACAATTTGCAAGATATG AGGGCCAAAATTTTCCCCTTAAAGGGAAGAAAGGCGAAGGCACCTGAAGTTGCCCCCTCAGTACCATTACCCGCTAGAAG AAAGGAGAGATCTCTTTCGTCTTTGGTGGTGATCACACCAAGGGCATCCGCGCAGGCAACCATGACAGGAAGAAGAACAA AACCTACAAGAAAGGCTAGTGGTCTGCGGTCCTCTAGTTTTTCCATCGAAAAGCCCATTAAAAAAGAGGAAGTATCAGGA GATCATCCTGAGAGTTCAAGCTCGCGGGACACTTCAAATAAGCTTCCTCAGAATACTGAACAGAGTTCGTCACCTTGCGG CGGTAGTCAATCCAAACCCAATAAAGAATCAGAGAATAGTGCCGAACCGTGGGATGCAAAATTGGATCTTTGGAAACCTT TGAATTTTTTAGTAGAGGTTGCTAGTAGGAGTAAATCTTTCAAGTCTAATGCGCAAGGGTCTGATGCTAAGCTAGAACCC ATTCCAGTAAATGAGAGTGACTCTCAAGTGCAGAAAACCAAAAATAAGGAAAATAAACGCAAGGCAAAAGTTGAGAATGA AAGGATTAGCCCTCATCTTGTCTCTTCAGATACATCAAAACCTAATAAGTTGCGCAGAATACGGAAGAAAAAGGAGCCTG CTCTTGGGGAATCAGGCATATCACCCCAAGCTGTGCTGCATTCTTCGAGCAATAAACTCTTAAGGGATGGTCCAATTTGG TTCTCCTTAGTAGCTTCTGAAAACCAGGAAGGAGATGCACCTTTGCCCCAAATTCCTTCAAGTTATGTGAGAATAAAGGA TGGAAGCTTACCTGTCTCATTTATCCAGAAGTACCTAATGAAGAAACTAGATCTGTCCAGTGAATCAGAGGTTGAAATTA AATGTATGGGACAACCAGTGATCCCTACACTGCGGCTACACAATTTGGTCGAGTTGTGGCTCGATTCAGCAGCCTCCTCA TCGCTCCGAATTCCAGCAACTATTGGGTCCTCAGCAAAGGATTTTGTCATGGTCCTGGCTTATGCTCGGAAGGTTTCACA CCCTTGA
Protein sequence (LotjaGi1g1v0713200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPNPVVKVRWNTIAACMTCPLCNKLFKEATTISECLHTFCRKCIYDKLSDEELECCPICNIDLGCVPLEKLRPDHNLQDM RAKIFPLKGRKAKAPEVAPSVPLPARRKERSLSSLVVITPRASAQATMTGRRTKPTRKASGLRSSSFSIEKPIKKEEVSG DHPESSSSRDTSNKLPQNTEQSSSPCGGSQSKPNKESENSAEPWDAKLDLWKPLNFLVEVASRSKSFKSNAQGSDAKLEP IPVNESDSQVQKTKNKENKRKAKVENERISPHLVSSDTSKPNKLRRIRKKKEPALGESGISPQAVLHSSSNKLLRDGPIW FSLVASENQEGDAPLPQIPSSYVRIKDGSLPVSFIQKYLMKKLDLSSESEVEIKCMGQPVIPTLRLHNLVELWLDSAASS SLRIPATIGSSAKDFVMVLAYARKVSHP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 426 | 426 | 4.3E-192 | – | |
| PANTHER | 1 | 426 | 426 | 4.3E-192 | – | |
| Gene3D | 5 | 102 | 98 | 6.5E-15 | ||
| SUPERFAMILY | 12 | 84 | 73 | 1.39E-10 | – | |
| ProSiteProfiles | 19 | 60 | 42 | 11.545 | ||
| SMART | 19 | 59 | 41 | 4.0E-5 | ||
| Pfam | 19 | 59 | 41 | 1.2E-7 | – | |
| ProSitePatterns | 35 | 44 | 10 | - | ||
| MobiDBLite | 112 | 202 | 91 | - | – | |
| MobiDBLite | 116 | 147 | 32 | - | – | |
| MobiDBLite | 149 | 168 | 20 | - | – | |
| MobiDBLite | 169 | 197 | 29 | - | – | |
| MobiDBLite | 226 | 264 | 39 | - | – | |
| MobiDBLite | 250 | 264 | 15 | - | – | |
| CDD | 318 | 422 | 105 | 1.72688E-49 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0713200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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