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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0718800 |
| Transcript ID | LotjaGi1g1v0718800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Arm repeat protein interacting with abf2; TAIR: AT5G19330.1 ARM repeat protein interacting with ABF2; Swiss-Prot: sp|B9DHT4|ARIA_ARATH ARM REPEAT PROTEIN INTERACTING WITH ABF2; TrEMBL-Plants: tr|A0A068U5R7|A0A068U5R7_COFCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0718800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:128835229..128839624) extracted from Lotus japonicus Gifu genome v1.2.
AATAGATCTCCCTCTCAAATTTGCCTCCTTTCCTCCTCTTATTCCCAATTGTTCTGCTCATTCTTGTAGTAATTGGGTTT TAGCACTTTGTGCTGCCTTTTCCAAAAAAAAAAAACACCATGGATCAGGATCACACTGCAGTCCGAAACTTAAAGCGTAA ACAAGAAGAATGTAATAATAATACACAGCTAATAGATTCTCAACGAGATCAAACCGACAAGATTGTCCAACAGATTCTTG TCCTCAAATCCGTTGCTTCATCCTCTCTCTCAGATCGTGTTACCTGTGCTGCCGTAAAAACTGCCCTAAAAGTTCTTTCT GAACTTGTCGGAGACGGTATCGAATCTAATCTAAATTCTCTCGTCCTCTTTTTTTGTTTTTTTTCTTTGCTTGAATTGTT CTTTACGCAATATCCGTTTTATTCTCATATAGAGGAGCTTGTGGATACTATAGTGAACTTTGACGTCGAAGTTCCAGATG GCTTGCAGATCGGATTCGTTTTGCTCATCGGCCTTCTGTCTTATAAAGTAATTGATTTATTTTGTTCTCTCTTCTATTCA TGTAAAATTGTGCTTCATGTATTACATTCAAAATGATTTTGTTTGTGCTTATCTTTATCTTCAAACAGCCAGAGTACCAA CAACCCATTGTTGATGCTGGAGTCCCGCCCTGTCTTGTTGATTTCTTAAGGGTGCATAAAGCTGGTCTCATGTCTCAAGC ACTTGTTGGTCTTCTTAATACAATAGTAGACACAATAACTAATCTTGCTCATACAAACATCAACACTATGAACCTTATCA GGTTGTCATTTGTTTCCATATGTTAGAGACATATGCTGCAAATATTTTATTCTCTACTCTTACGTGATATGGATGGTTCA GGAATGAAGGTGGTATTCCACTTCTTGTTGAATTGCTTGAATTCAATGATTCAAGTGTGCAGAGGGCAGCGGCAGGAGCC TTACGAACTCTTGCATTTAACAATGATGACAACACAAATCAAGTAGTTAACTTTGCACTGTGAGTTAATATTATAGATTA TTTAAACATAGTTGTTTACATGAATGAAAAATTGCAGATTGTGGAATGCAATGCGTTGCCCACTCTTGTATTGATGCTTC AATCAGAGGATCCTACTATACATTATGAGGCGGTTAGACACATGCGAATTTCCATAATCCCTTATATCTGATTTTGCTGG CTACATAGTTCTAAGCTTTTAACACTAGTTGAATAACGGTTTTTGCAGATAAGTGTAATTAGAAGTTTGATCCACAATTC ACAAAATATTAAGGAAGTTGTTCTTGAAGTTGGCGCTTTACAACCGGTGATTTTGTTATTGAGGTAAAATTTCACATAAC TCATTGTTTTCTGTGTATGCAATACAATGAAAATGATGTGTTCCTCTAACATGTTAGCTGCTTGCTGCAAGTGAGCAATA CCTTTTCTCCCTAATTAATCTATCCAAGTTCATGATATTAATCTCTACGAGTTTGTGATTTTAATGATAGGTCCTCTTGT TTGAAGACCCAAAAAGTAGCAACTTCTTTACTTGGTGAATTTGCTACATCATATTCATGTTCCAAGGTGGATCAAGTTTT ATGTATTTCCAAAACGCAATAAATCTATCATTTGTAGAATTATCTTATTAATTTGCATACCCTGTGATTCATGCAGGCTC GGATTGCCCAAAGAGGGGCTATAATACCTTTGGTTGACTTGCTTAAGTCCTCAGATGAACTACTTTGTGCAATGTCAGCT TTTGTTCTTGGGAAGTTAGCCGAGGTGATTAATACTAGCAGCAAATATTTGCCTTATGTCTGCTTAAGTGAATCAAATCA ATGAATACAAAGTGAAGTTGGGTAATTTTTGGGTATATGTGGGAATTGATTTTTTAAACCTATTTCTTATTGCTTATATA ATTCAACTGCTAGGACTCCGACAATCAAGTTGGTATTGCTTATAACGGAGGTATAGAGCCTCTGCTCAATCTTCTTGGCT CAAAGAATGAGTGTATTCAACACTATGCAGCCTCCACTCTCTCTTGTGTCGCTTATAATGAGGTGGAGTCAGTTTCCTTG TTCTTTAATTGGTCAAAAATTCGCAGCGATATGCTTCCACTGATTTTATAGCTTTGTTTTATAGGACAATGTTGTAGATA TTATTAAGGCTGGTGGTATTCAAAAACTGCTCAATGGACATACTGAAGTATGTTCATTTATTCTCCTTTTTAGTTTAGTA ATATTGCATTTGATTTACCATTATATCTTCTTGACGATTATATTTTGTTTATCAAGGTTTGCTAATAGAACTCATTTCCC TCACTAATTTATTAATTGTGTTGTTCTTATTACAGGCTTCTGATTATGTGTGTCTGTGTGTGGAAATGATATTAAAAAGA TTAGAGGAGAACATGCATGGGCGAGTGAGTTTTCTAGCATATTATCAAATTTCTATAGCTAATGATGGATTATAATCGAA TATGAGATTTGTAATCTATTTTAATACTTCTTTTTGCAGTACTTGATATGAACATTATATCATTTCCTCTTTGGCAGGTA CTGAAACATCTGTTGAATCTTATGCGCTTTGCAGACAAAGATGTTCAAAGACTTGTAGTTATTGCTCTTGCTCATTTATG TTCCCCTAATGATTATAAAACTATTTTCATTGTTAATAATGGTAATAAACATTGATCTGTCCATTTTTGTCATTTCTCAC TCACAATACTTGGAAAATATTTTCATTCAATAACCTGCTAAATCTTCAGGACTAGAACTGCTTCTGGATCTTCTTGAATC TAAAAACCTAAAGCAGAAGAGTGATGCTTCAGCAGCGCTTCTCAAGTTATCTACCAAAGCCACATTTGTCTCTATTGTTG ATGCTGCTTCTCCATTACTATCGTCCAAAGTATTTTACTATCATGTGTTTAAGATATCATGATTGCTTCACTCATAATTG AAATTGATTTGCTGATATTTAGTTGTTCATGTATGAAAATGAACACTATGAGACATTTTTTTCTCGTTTTATGTCATTTA TTGGTTATATTTTCTGTAGGTGTACATGGACGAACATTATGTGAACAATCCCAAACTATCTAATGTCACATTCTTAGTTG AAGGTGGAGAACCTGCTGCCAAGTTTTTCTGTTGCTATTTTTTTCTATACCTTTGTTTATATGCATATTAATTTTGATAT ATGAACTAATTTATTTTGTTTTCCTTTCTTAAGGTGAAAGGTTTTATGCTCATAGAGCTTGCTTGCAAGCTTCTTCAGAT GCATTTCACGCAATGTTTGATGGGGGTTATAGGGTAAGTTTTAATAAACCTTGAATCTTTGTTTTAACCCTCTCCGTTTT CTCTTTCATTTGGATCTGACTGTGATGGTTGGTTCTTCAATTTGCAATTGAAGTAAGATGAATGGATTTGCCGAACTTAA GTGTAAATATCTATAATAATGTCATAATATATGTGTATTGTAGGAAAGTGAAGCCAATGACATCGAGATTCCAAATATTA AATGGGATGTCTTTGAGATGATGATAAGGTATTGTGGTGCAAAGTGCAATACCTACTGTTCTATTTCTTTTTTTATAATA AGCTCTATATATGAATTGATTTTTTGTTGGACTTCAGATTTATTTACACCGGAACAGTAGATGTCAAATTGGATATTGCT GTGGACCTCCTCATAGCTGCAGATCAGTATCTTATGGAAGATCTTAAGCGTCTTTGTGCACATGAAATTTCTCAAGTAAA CCAAGAATTGAGTTCCACTGTTGCTTTATTTCTTCTGTGCTTGTAGATTTTTCTTTTAGTTTGATTTAATCGAATTACTC TTGAAATTATTCTTACAGGATATTTCTGTGGATAATGTTTCACTAATGTACGATATGTCAGAGACATACAATGCTACATC ATTAAGAAACGCGTGCATACTGTTTGTCCTGGAGCAATTTGACAAGTTGAGTGTCAAACCATGGTATGTATATTCTTTAA AACATGGACAATACTTTCATAATTCAATGTTTGATCATATTTCTTTATCCACCTGCTAAATAAGTAAATATGCAGGTATT GTAGCCTCGTTTGTCGCATTTCACCCAGCATACGCAAATTTTTCTCAGATTTACTAACCAAGCCAAGTGATTCAGAGGAC CACTGAGGATCCTTGAATTTTAAACACTGGAAAAGGTGAAAGACGTAAACATTTTAGTAAGAAATAGAATTATTGATCAT TTCCCTGTAGCAATGAAGTTGGCCTAAGACTTTGGTCGGTACTTTGAGATTTCCCATGTTAACATGGTGCGTGTTGAAAG ATTATTTCCAATCTAAACTTGTTAAAATTTTAGCCCAAGACTTTCCGTTTGTTGAAGCAAAGAATGCTATCTAATT
CDS sequence (LotjaGi1g1v0718800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATCAGGATCACACTGCAGTCCGAAACTTAAAGCGTAAACAAGAAGAATGTAATAATAATACACAGCTAATAGATTC TCAACGAGATCAAACCGACAAGATTGTCCAACAGATTCTTGTCCTCAAATCCGTTGCTTCATCCTCTCTCTCAGATCGTG TTACCTGTGCTGCCGTAAAAACTGCCCTAAAAGTTCTTTCTGAACTTGTCGGAGACGAGGAGCTTGTGGATACTATAGTG AACTTTGACGTCGAAGTTCCAGATGGCTTGCAGATCGGATTCGTTTTGCTCATCGGCCTTCTGTCTTATAAACCAGAGTA CCAACAACCCATTGTTGATGCTGGAGTCCCGCCCTGTCTTGTTGATTTCTTAAGGGTGCATAAAGCTGGTCTCATGTCTC AAGCACTTGTTGGTCTTCTTAATACAATAGTAGACACAATAACTAATCTTGCTCATACAAACATCAACACTATGAACCTT ATCAGGAATGAAGGTGGTATTCCACTTCTTGTTGAATTGCTTGAATTCAATGATTCAAGTGTGCAGAGGGCAGCGGCAGG AGCCTTACGAACTCTTGCATTTAACAATGATGACAACACAAATCAAATTGTGGAATGCAATGCGTTGCCCACTCTTGTAT TGATGCTTCAATCAGAGGATCCTACTATACATTATGAGGCGATAAGTGTAATTAGAAGTTTGATCCACAATTCACAAAAT ATTAAGGAAGTTGTTCTTGAAGTTGGCGCTTTACAACCGGTGATTTTGTTATTGAGGTCCTCTTGTTTGAAGACCCAAAA AGTAGCAACTTCTTTACTTGGTGAATTTGCTACATCATATTCATGTTCCAAGGCTCGGATTGCCCAAAGAGGGGCTATAA TACCTTTGGTTGACTTGCTTAAGTCCTCAGATGAACTACTTTGTGCAATGTCAGCTTTTGTTCTTGGGAAGTTAGCCGAG GACTCCGACAATCAAGTTGGTATTGCTTATAACGGAGGTATAGAGCCTCTGCTCAATCTTCTTGGCTCAAAGAATGAGTG TATTCAACACTATGCAGCCTCCACTCTCTCTTGTGTCGCTTATAATGAGGACAATGTTGTAGATATTATTAAGGCTGGTG GTATTCAAAAACTGCTCAATGGACATACTGAAGCTTCTGATTATGTGTGTCTGTGTGTGGAAATGATATTAAAAAGATTA GAGGAGAACATGCATGGGCGAGTACTGAAACATCTGTTGAATCTTATGCGCTTTGCAGACAAAGATGTTCAAAGACTTGT AGTTATTGCTCTTGCTCATTTATGTTCCCCTAATGATTATAAAACTATTTTCATTGTTAATAATGGACTAGAACTGCTTC TGGATCTTCTTGAATCTAAAAACCTAAAGCAGAAGAGTGATGCTTCAGCAGCGCTTCTCAAGTTATCTACCAAAGCCACA TTTGTCTCTATTGTTGATGCTGCTTCTCCATTACTATCGTCCAAAGTGTACATGGACGAACATTATGTGAACAATCCCAA ACTATCTAATGTCACATTCTTAGTTGAAGGTGAAAGGTTTTATGCTCATAGAGCTTGCTTGCAAGCTTCTTCAGATGCAT TTCACGCAATGTTTGATGGGGGTTATAGGGAAAGTGAAGCCAATGACATCGAGATTCCAAATATTAAATGGGATGTCTTT GAGATGATGATAAGATTTATTTACACCGGAACAGTAGATGTCAAATTGGATATTGCTGTGGACCTCCTCATAGCTGCAGA TCAGTATCTTATGGAAGATCTTAAGCGTCTTTGTGCACATGAAATTTCTCAAGATATTTCTGTGGATAATGTTTCACTAA TGTACGATATGTCAGAGACATACAATGCTACATCATTAAGAAACGCGTGCATACTGTTTGTCCTGGAGCAATTTGACAAG TTGAGTGTCAAACCATGGTATTGTAGCCTCGTTTGTCGCATTTCACCCAGCATACGCAAATTTTTCTCAGATTTACTAAC CAAGCCAAGTGATTCAGAGGACCACTGA
Protein sequence (LotjaGi1g1v0718800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDQDHTAVRNLKRKQEECNNNTQLIDSQRDQTDKIVQQILVLKSVASSSLSDRVTCAAVKTALKVLSELVGDEELVDTIV NFDVEVPDGLQIGFVLLIGLLSYKPEYQQPIVDAGVPPCLVDFLRVHKAGLMSQALVGLLNTIVDTITNLAHTNINTMNL IRNEGGIPLLVELLEFNDSSVQRAAAGALRTLAFNNDDNTNQIVECNALPTLVLMLQSEDPTIHYEAISVIRSLIHNSQN IKEVVLEVGALQPVILLLRSSCLKTQKVATSLLGEFATSYSCSKARIAQRGAIIPLVDLLKSSDELLCAMSAFVLGKLAE DSDNQVGIAYNGGIEPLLNLLGSKNECIQHYAASTLSCVAYNEDNVVDIIKAGGIQKLLNGHTEASDYVCLCVEMILKRL EENMHGRVLKHLLNLMRFADKDVQRLVVIALAHLCSPNDYKTIFIVNNGLELLLDLLESKNLKQKSDASAALLKLSTKAT FVSIVDAASPLLSSKVYMDEHYVNNPKLSNVTFLVEGERFYAHRACLQASSDAFHAMFDGGYRESEANDIEIPNIKWDVF EMMIRFIYTGTVDVKLDIAVDLLIAADQYLMEDLKRLCAHEISQDISVDNVSLMYDMSETYNATSLRNACILFVLEQFDK LSVKPWYCSLVCRISPSIRKFFSDLLTKPSDSEDH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 670 | 670 | 1.2E-262 | – | |
| PANTHER | 1 | 670 | 670 | 1.2E-262 | – | |
| Coils | 11 | 31 | 21 | - | – | |
| Gene3D | 22 | 229 | 208 | 4.9E-26 | ||
| SMART | 104 | 152 | 49 | 0.28 | ||
| SUPERFAMILY | 144 | 487 | 344 | 9.79E-50 | ||
| SMART | 153 | 194 | 42 | 8.3E-5 | ||
| Pfam | 160 | 193 | 34 | 3.8E-7 | ||
| ProSiteProfiles | 165 | 199 | 35 | 12.652 | ||
| SMART | 196 | 236 | 41 | 2.9E-4 | ||
| Pfam | 196 | 234 | 39 | 2.6E-5 | ||
| ProSiteProfiles | 207 | 249 | 43 | 10.762 | ||
| Gene3D | 230 | 405 | 176 | 2.3E-30 | ||
| SMART | 237 | 278 | 42 | 0.67 | ||
| SMART | 279 | 320 | 42 | 29.0 | ||
| ProSiteProfiles | 291 | 333 | 43 | 8.802 | ||
| SMART | 321 | 361 | 41 | 4.7 | ||
| ProSiteProfiles | 332 | 374 | 43 | 10.902 | ||
| SMART | 392 | 436 | 45 | 110.0 | ||
| Gene3D | 406 | 495 | 90 | 4.0E-8 | ||
| SMART | 437 | 477 | 41 | 45.0 | ||
| CDD | 496 | 611 | 116 | 1.76662E-60 | – | |
| SUPERFAMILY | 500 | 603 | 104 | 4.93E-29 | ||
| Gene3D | 500 | 643 | 144 | 8.7E-43 | – | |
| Pfam | 503 | 604 | 102 | 1.3E-24 | ||
| SMART | 509 | 606 | 98 | 5.5E-23 | ||
| ProSiteProfiles | 509 | 576 | 68 | 17.955 | ||
| CDD | 605 | 668 | 64 | 1.24202E-26 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0718800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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