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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0739200 |
| Transcript ID | LotjaGi1g1v0739200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ubiquitin carboxyl-terminal hydrolase; TAIR: AT5G22030.1 ubiquitin-specific protease 8; Swiss-Prot: sp|Q9C585|UBP8_ARATH Ubiquitin carboxyl-terminal hydrolase 8; TrEMBL-Plants: tr|A0A0B2SA22|A0A0B2SA22_GLYSO Ubiquitin carboxyl-terminal hydrolase 8; Found in the gene: LotjaGi1g1v0739200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:131335522..131342871) extracted from Lotus japonicus Gifu genome v1.2.
AAGGGCAAATTTTGTGCTTTTTAAAACGTGATAGATTGGGGAAGTTAAAGGGACTATGAATCTATGAGGTACTATATGAT ATGACCCGATTATCCGAAAAGCTCCGTTTATCTTCCTTGCTCCTGAAACCGACCCGTTTTCTCGCTCTAGTTTCTCTCTC TACTCTCTTCCGTCTCTGCAAGTCCCTCGCTCGCTTCCTACTCTCCCAAACCCTACCTTTCTTCTCCATGGACAGCCTCT TCTCCAGTAACTCCGACTACTTCTCCGACGACTTCGATTCCTCCTACTCCCACCGTCGCTTCTTCCGTGACGATGACCGT GATTCCGTCGCCGACGAGAGGGTCTACCTACTCCCCTACAAGTAACTAAACTACTACTCACGATTTCATTCCCATTCATG TAAAATCAATGTTGTTTTTCATTCAGATTATCATTGCATGGTGCGATTTTCAAATTTCAAGCTAGGTTTTGTCATTCATT CTTGTTCAACAAACAATTGGAATCCACGATTTGTTACTTGCATTGGAATGGATTTTGGTGTTTTTTTTGTTGCGAAATTG ATTTCGGGTTTTTGTTTTTTGTTGGAGTGAAGGTGGTGGGAGGAAGTTGAAGGTGAAGCTGATGATGGTGGAGGAGGTGT TCTGTACACGGTGTCGTCTAGTGCTGATTCTGACTCTGAGATTTTGCTCGAACTGACTCTCGAAGAGAGCGGCGAAGAGA GCCACGAGAAGATTAAGAATCTGGAGGTAGAGTTTTCCGGCCGTCAGTATGCATTGGTCCCGGAAGGAATGTGGTTGCGT GCTCTCAAACGGTGAGTGACGAATTGCTTTTTCCCTCGCATCTCTTTTTTCCATTTTTCAAGAGGATGTAGTTGTAACTT GTAGGTACTGTTTTATTGAAATTTAAGCAGAATTTCCAATTTTGAGGTCCTTTTAGGGCTTAGCAGTTCAGGAGGCGTTG AGTTATAATTATGGTTATCTTGTGTATGTGTTACATGTGGTCTGTCTCGCTTTTACAAGGAGCAATAATTGACCTGGTGC CCACTTTTAGGCATGTACTTGAGCTGCATTTCTGTGATTTCCTGGTGCCTTCGCAAAATGCATTATTTTTGAATGACATG TGTCAGAATTATGCAGCAAGATGATTTCTATATCGTGTCAGCAAGTATCGACCTTGACCTTGTCTGGTCGAACGGCACCA GGTTGTCTTCCAATAGGTGTGCTGGCATGTTCCTATCGCAGTTGCAGCCCTAGGATGCAGATCTATAGGACCCAAAAATG TGTCTCCAGGCTGTGTCTTCCCTATTATGTTTCACTAGAGAGATCCTTGAAACTGCATTAGGTAGGGCATGCCCAACACA AGGTCAGTGATAGGAGCCACACTAGTCCTTTTGGAGTGATGGAGAACTAACATTGTATGAATTGGTTGGCGGTGCTAATG AATATTCCTCCAATTACCAATACCTCCTGTGGTCATGTGGGTTATTAAAATATGATGTTAATAAAACTGGTTTGAGGGAG AACAGAGTGCAGTAAATAACGCATGGAACAGTGTGCATACCCTTCTTTAGCACCAAAGTTATATGAAATTCGTCAGCAAT CAGGTTTACTTACCACGGCGACTGCATGCAAAATTTCTTTTACCCTTCTCAGCTTCTTCTCCTTCTTGTCTGTCTAACTG AGATAATACTCATCTTCTTTATGATTCCATGTGCATATTATAAAAAATTAACATTGATTTTTTTTTGCTTTTTACACGGG CATAATACTTTTAGAATGGTGGTGAATGATATCATGAGACGTCTACGGGTAGAAGATCTTATTCTGTATTTGTTTCCATT TTCAAGTTGGAAAATACATCTGAATGGTTCTTACAAGCACATATAAAATTCAGAAGTGGAAATTGATCCATGTTACTACT TTTGTAGGTATAATGATTTTAATAATGCAGTAAATTCAGAAGAGGACTGTTTGCTGGATTTGTTCCCCTTGCAAGTTAGG ATATCGGTTTCAGGGGAAACCAGTTCACTGGTAGCAACGATAAGCCAAAAGGTTGAGTTAATGCTTTGCTTATTTGGTTT TTCTTGATGGTCTTTGGCCAGTGTTAATGATTTTCCTTGAAAAGAGCCTGGAATCTATTTTCTATTTTATTTAAAGTAGT TTTGCACAATCAGTTGTTTATAGTAAGTGGCGTGATTTCAGGAAAACATGGTTGAATTCTACAAGAAAGCTTGTGGCATT TTCAATCCCGCGTATAACCCAGTGAGTAAGCTAGCAATTAATCTTCTTCATAGGTTGTCTATGTGCCCTTGGTTATTTAT TATTCTGTGTTATTGGTGATGCAGGTGCATATTTGGGACTTTTCAGGGCAGACGACCCAGTTATTTATGAATGACAAAGT TAGGTTGCCAAATGATTCTCACGGTCAACCTGGAAAAGAGGTAGTTGCTGATTCTTCTTTTTCGGTGTTCTTTTTATATA ATTTTGCTGCAGAAATTGAGTTTGTTGTGGTCCAGCAAGGAACTAGTTGTTTATTTTCCTGATAGTCTTGAATTTTAGAC ATCTGTTTTCAAGATCTATTGTTAGTTTTGAAAACATGAAATTTAGATATTCGGTCTTTTTATAGCGGTTGGACTGCTAC ATGTCTAAGCAGGTTCTTCTGGAGTTACAAGTTCATGGATTTTCAGATTCAGTGATGGGTAATGGGAGAGATGAGATGAT TTCAGATAGGTCTCAGATGGAATGTTCTTCTAGCAGTAGCTCTGTTGTGATGAATGGAAGCACTGGCAAAGTGATTCCTT ATGTAGCAACATCCAACTATTCTCAAGGCTGTAGCTATAGAGCAGTTCGAACTTTGGGCTTGACAGGGCTACAAAATCTT GGAAATACCTGTTTTATGAATAGTGCCATTCAGTGTCTGGCTCATACCCCTAAGCTTGTTGATTTTTTCCTCGGAGATTA CCGTAAAGAGATAAATTATGAAAATCCCCTGGGAATGAATGTATGCTATTTATATTTTCTTTTTCTTTTTTTGTTATTTG TATTGTAAGCAGGTTTCTATTTAGTGTTGCTTACTTTATATTATCTCTTTCTCTAAATATTTTTCAGGGAGAACTTGCTC TAGCTTTTGGAGATCTGCTTAGAAAGCTGTGGGTTCCTGGACAAAGGCCTGTTGCACCACGAATATTTAAGATGAAACTG GCTAATTTTGCCCCTCAGTTTAGTGGTTATAGCCAGCATGACTCTCAAGTTAATACCTTCATCTAACTCTCTCTCTCACT CTCAATAAATACAGCAACAACAATTGTATTTTCCTCGTGCATATCTTAGCATTGATGAATTTTCCATTGTTGTGACATGA GATGAAATAACTTTATAAAATATTGAAGCTTTTGGCATGCAGGAACTTCTTGCCTTTTTGTTGGATGGACTGCATGAAGA CCTTAATCGTGTAAAACGGAAGCCATATCATGAAGTTAAGGATGCAGATGGCCGTCCAGATGAAGAAGTTGCAGAAGAGT ATTGGCGAAATCACCTTGCTCGCAACGATTCCATTATAGTTGATTTGTGCCAAGTGAGTCTAGTAATTTTGTTCCCTTTT GTGAGAATCTCTCACTCATTTAGTAATCAGTGATGGATATAAGTTTTTTATGTAAATAATAAAGTGTATACCTCTGATTT TAATTTGTTTGTGTCAGACTGCTATTATAAGAAGGACAGTTTGGTGTAGTGGAAAAAGTAGTTCTCATGTAGAACTGACT ACTAGCTGCCACTGAGCTCACTTTTTATATGGTTAAACCACATTTGATGTGAGGTTTTATAAAATTATTTTAGTTTTTTC TTAGGCAGTTTTAAAAACTGGTCCACCTATGAACCATGTTTTTACAACTAACATTCAGCTCATGTTATTTACAATGTGGT CCCTTCTTATGTAATAAAACTAATTTGCAAAGAAGCCCTTTTAACTTGTGAACCATGTTTTTCTTGTGGTCCACAAAAGA CAAAGCCTTTTTGTAAAGAAAAAAATGGTTATTTGGAATCAAAACTTTTCTACATTTCCTCTAATTTAATATTTCACACT TTGAAATTAAACTTCTATTTGGTTCCATTATCTTGTAGGGTCAATTCCGCTCAACACTGGTTTGCCCTACTTGCAAGAAG GTTTCTATCACATTTGACCCATTTATGTATCTATCCCTGCCTTTACCTTCTACAACGATGCGGACCATGACTGTAACTGT CATGAGCACTGATGGGATTCAACTGCCTTCTAGAATTACTGTAACGGTGCCTGAATATGGTACAATAGAAGATCTTGTTG GAGCCGTAAGTGCTTCTTGTTCTCCGAGAGATGATGAAATCCTCTTGTTGGCTGAGGTATCCTACAAAAGTTACACGTTT AGTAGAATAGTATTGCACATTATCACTGATTATTGATTAAATAAAACATCATGTGAGATATTTTAAACATTAATTTGAAG TCTGACGTTATGGAGCTATCAACAGGTATACAAGAATAAGATTTTTCGAATATTTGATCCGCCATCTGAAAAATTAACCG AAATCAGAGATCAAGACAAACTTGTTGCTTACCGATTGAAGAAGTATAATGACGCTAGTACCTTGGTTATTTTCATGCAT GCGAAACGTTTGGTGGAAGAGTAAGTTTTTCTATCCCTTTATTCTAATTCTTTTCCTTTTACAGACTTGAGTAATATCAG TTTGTTTGTACAGTATCCTTCTTTGTATGTTTGTCACATATAATTCTTGTATAACCCTGGACCTGAATTAAACACTCTCC CAGCAGACATGGCGTGATCTCAACTGTCGGGAGTATGTGCTCCTTCCTAGTGTATCTAATTTCACATTTTTCACCTCCCG AAGATATGAACCTAAGAATGCTAATATGAATTATTTATAACTCTTGAGTATAAAATAGATACAATTGTTCGGGTTTTCTA CCATAGTTGTTATTTATGAACTTCGTTCATATAAAGCAATTTTTTGTGCCAATTTAGAAATGCGTGCACTAGGTAAATGC ATTTGTTTCTCTATTCGGTGACGTTGTTGCTCTTATTTGATGTACTAATTTTTTTTTGTATTTTGTATTACAGTTATGTG AATGGGAGGTTTGAAAATGTACTGGTTGGTATTCCAGTTGTGACAAGGTTGTCCAGTATTTCTTATGGACATGATGTTCA TAGGGAGTTTCTGAAGTTAATCAATCCATTTATGATGCAAAACACTGAAGATATGACAGATGAGTACGACCAGGATGATG ATGTTATTGAAAAAGTACATACTGATGATGAATTGGGTGATCCTACTGGCTCTGCAGCATTAGGAAGTGATGTAGTCTCA AGCAGTGGAGCAGAAGATGATTTGATACATTCAAGTACTGACTTCGAATTCTACTTTGCTTCTGAGTCAGGAATAGAAGA TAAGATGACACTGAGCGATCCATTACCAGACACATTGTCCCCCAAAGGGCTTGTGGTAGTTGTTTTCTGGTCGGATGATA TGCTTAAAAAGTATGATAAAAATCTGCTGGGCTCATTGCCTGATGTGTTCAAGCCCCAGCTATTCACCAAGAGAACACAG GAATCAATTTCTATTTACAAGTGCCTTGAAGCCTTCTTGAAAGAGGAACCTCTTGGACCAGAAGATATGTGGTTAGTAGA TATAACATATGTCAAGTCTGTTATTTTACCTTTGAATATTTTCATGTTCTGAGAACCTTATATCTTCAATAGAATTTATT TATCATCATAATTTATTTGTTCGTCATGAATCAAGTTCATTCTCTCTTATGTACCAAAAGCTCAGATGTATATCAGTCTT TTTGATGGTTGATATTGTAATTTGGTGTACAAAAGGTACTGTCCTTCCTGCAAGAAACCTCAGCAAGCAACTAAAAAGTT AGACCTTTGGAGATTGCCTGAAATCGTTGTTATTCATTTGAAGAGATTCTCATACAGCCGATACTTCAAGAACAAGCTGG ATACATTTGTTGACTTCCCAGTTAATGATCTGGACTTCTCAGCTTATGTTGCTCACATGAATTATCAGTCTTCCAATCGC TATGTGTTGTATGCAATTAGTTGTCACTATGGAGGGTTGGGAGGTGGTCATTATACAGCATTTGTCCGTGTAAGTACCTC ATAGTTGTCAATGTCTCTTATTCTGTTAAAACTTTAGAATTATTCTTCTGTCCATTTTTTTATAGGGCATTGTTTACCCA AAGAAAAATGTATTCCACTAGCTATTACAAATACTTATTTCTCTCTTTGGGCAAAGAGTGGTAAAGAATGTTGTGACAAG TGAGTGAAAATAAGAGTTTTGGCAGACTACCTGAATGAGTAAGATATGTTTCTGTGGTTATGTAAAACAATTTGGAGGAT GTTAGAGCACATAAGGAGGTGGGTGTTTTTTGTTTAGTATTATTACCTTCCTCGGGTATGTATATATTTTCAACTTGATC ACCAAATCCATTTGGTTTTGAATTTTCAAAATGATTACTAAATACTAATCCTTAACCTTCCAAGACCCTCCTCCCTCGAA ATTAATTTCTTGATACATCAATGTTTCTCAATACTTAGTTTATTCTGTACATATATTCATATATTCATTCTAAGTATGCT TATCCAACTGTTTTTATTTCCGTGCAGTATGGCCATGAGAAATGGTACGAGTTTGATGACACCAGGGTTGCCCCTGCTAA TGAGGACGAGATTAAGACTTCTGCTGCTTATGTTCTTTTTTACAGGAAAGTTTAGATGAAAACTTTAGAAGTGTGCAATT AGTGTTGAGGCTTTTTAGACTTTTTGCATATACAATTGTCTGGCTTCCTCAAAATTGCAGCTGAACCGATACTGGTTAAG TTTTACTGAGAGTAGTGAAGAGAAAAAGAAAAGGATTTGATATTTTGTACAGCTTTTAGAAGCTAAAAGGGGTAGATCTT AAATTTTTAAAGCTGGAGGGTAGATTATTACAGCTGTTGTGCGACATGTATATATATTTATGCAACATGAAAACATTTAA CCCATTTTTTGCAGATGTAGCTTTGGTTCTTTTTCAGCCGTGATTATATAATGGGAAATTACTGTTTTTTTGTCTCTAGT TCATCGCATTCTTAGTGTTTTTCCATTTGACCAATTTTTACGGTTAGAGTGAGTATACTTCTTGGCATGTGAGTGTAGAG TGAACCCTACTCTCTCTATGATGTTTATCTACAAGATGCTCTCTTCCCTTAATGGAAAGTGAGTTTCAAACGCTTCATGA GAGTGAAATTCTAATATGTCAAAATTGTTGAAATTCAAATTAATTTTAGGTTTAATTGTTTATTTTTTTC
CDS sequence (LotjaGi1g1v0739200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACCCGATTATCCGAAAAGCTCCGTTTATCTTCCTTGCTCCTGAAACCGACCCGTTTTCTCGCTCTAGTTTCTCTCTC TACTCTCTTCCGTCTCTGCAAGTCCCTCGCTCGCTTCCTACTCTCCCAAACCCTACCTTTCTTCTCCATGGACAGCCTCT TCTCCAGTAACTCCGACTACTTCTCCGACGACTTCGATTCCTCCTACTCCCACCGTCGCTTCTTCCGTGACGATGACCGT GATTCCGTCGCCGACGAGAGGGTCTACCTACTCCCCTACAAGTGGTGGGAGGAAGTTGAAGGTGAAGCTGATGATGGTGG AGGAGGTGTTCTGTACACGGTGTCGTCTAGTGCTGATTCTGACTCTGAGATTTTGCTCGAACTGACTCTCGAAGAGAGCG GCGAAGAGAGCCACGAGAAGATTAAGAATCTGGAGGTAGAGTTTTCCGGCCGTCAGTATGCATTGGTCCCGGAAGGAATG TGGTTGCGTGCTCTCAAACGGTATAATGATTTTAATAATGCAGTAAATTCAGAAGAGGACTGTTTGCTGGATTTGTTCCC CTTGCAAGTTAGGATATCGGTTTCAGGGGAAACCAGTTCACTGGTAGCAACGATAAGCCAAAAGGAAAACATGGTTGAAT TCTACAAGAAAGCTTGTGGCATTTTCAATCCCGCGTATAACCCAGTGCATATTTGGGACTTTTCAGGGCAGACGACCCAG TTATTTATGAATGACAAAGTTAGGTTGCCAAATGATTCTCACGGTCAACCTGGAAAAGAGGTTCTTCTGGAGTTACAAGT TCATGGATTTTCAGATTCAGTGATGGGTAATGGGAGAGATGAGATGATTTCAGATAGGTCTCAGATGGAATGTTCTTCTA GCAGTAGCTCTGTTGTGATGAATGGAAGCACTGGCAAAGTGATTCCTTATGTAGCAACATCCAACTATTCTCAAGGCTGT AGCTATAGAGCAGTTCGAACTTTGGGCTTGACAGGGCTACAAAATCTTGGAAATACCTGTTTTATGAATAGTGCCATTCA GTGTCTGGCTCATACCCCTAAGCTTGTTGATTTTTTCCTCGGAGATTACCGTAAAGAGATAAATTATGAAAATCCCCTGG GAATGAATGGAGAACTTGCTCTAGCTTTTGGAGATCTGCTTAGAAAGCTGTGGGTTCCTGGACAAAGGCCTGTTGCACCA CGAATATTTAAGATGAAACTGGCTAATTTTGCCCCTCAGTTTAGTGGTTATAGCCAGCATGACTCTCAAGAACTTCTTGC CTTTTTGTTGGATGGACTGCATGAAGACCTTAATCGTGTAAAACGGAAGCCATATCATGAAGTTAAGGATGCAGATGGCC GTCCAGATGAAGAAGTTGCAGAAGAGTATTGGCGAAATCACCTTGCTCGCAACGATTCCATTATAGTTGATTTGTGCCAA GGTCAATTCCGCTCAACACTGGTTTGCCCTACTTGCAAGAAGGTTTCTATCACATTTGACCCATTTATGTATCTATCCCT GCCTTTACCTTCTACAACGATGCGGACCATGACTGTAACTGTCATGAGCACTGATGGGATTCAACTGCCTTCTAGAATTA CTGTAACGGTGCCTGAATATGGTACAATAGAAGATCTTGTTGGAGCCGTAAGTGCTTCTTGTTCTCCGAGAGATGATGAA ATCCTCTTGTTGGCTGAGGTATACAAGAATAAGATTTTTCGAATATTTGATCCGCCATCTGAAAAATTAACCGAAATCAG AGATCAAGACAAACTTGTTGCTTACCGATTGAAGAAGTATAATGACGCTAGTACCTTGGTTATTTTCATGCATGCGAAAC GTTTGGTGGAAGATTATGTGAATGGGAGGTTTGAAAATGTACTGGTTGGTATTCCAGTTGTGACAAGGTTGTCCAGTATT TCTTATGGACATGATGTTCATAGGGAGTTTCTGAAGTTAATCAATCCATTTATGATGCAAAACACTGAAGATATGACAGA TGAGTACGACCAGGATGATGATGTTATTGAAAAAGTACATACTGATGATGAATTGGGTGATCCTACTGGCTCTGCAGCAT TAGGAAGTGATGTAGTCTCAAGCAGTGGAGCAGAAGATGATTTGATACATTCAAGTACTGACTTCGAATTCTACTTTGCT TCTGAGTCAGGAATAGAAGATAAGATGACACTGAGCGATCCATTACCAGACACATTGTCCCCCAAAGGGCTTGTGGTAGT TGTTTTCTGGTCGGATGATATGCTTAAAAAGTATGATAAAAATCTGCTGGGCTCATTGCCTGATGTGTTCAAGCCCCAGC TATTCACCAAGAGAACACAGGAATCAATTTCTATTTACAAGTGCCTTGAAGCCTTCTTGAAAGAGGAACCTCTTGGACCA GAAGATATGTGGTACTGTCCTTCCTGCAAGAAACCTCAGCAAGCAACTAAAAAGTTAGACCTTTGGAGATTGCCTGAAAT CGTTGTTATTCATTTGAAGAGATTCTCATACAGCCGATACTTCAAGAACAAGCTGGATACATTTGTTGACTTCCCAGTTA ATGATCTGGACTTCTCAGCTTATGTTGCTCACATGAATTATCAGTCTTCCAATCGCTATGTGTTGTATGCAATTAGTTGT CACTATGGAGGGTTGGGAGGTGGTCATTATACAGCATTTGTCCGTTATGGCCATGAGAAATGGTACGAGTTTGATGACAC CAGGGTTGCCCCTGCTAATGAGGACGAGATTAAGACTTCTGCTGCTTATGTTCTTTTTTACAGGAAAGTTTAG
Protein sequence (LotjaGi1g1v0739200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTRLSEKLRLSSLLLKPTRFLALVSLSTLFRLCKSLARFLLSQTLPFFSMDSLFSSNSDYFSDDFDSSYSHRRFFRDDDR DSVADERVYLLPYKWWEEVEGEADDGGGGVLYTVSSSADSDSEILLELTLEESGEESHEKIKNLEVEFSGRQYALVPEGM WLRALKRYNDFNNAVNSEEDCLLDLFPLQVRISVSGETSSLVATISQKENMVEFYKKACGIFNPAYNPVHIWDFSGQTTQ LFMNDKVRLPNDSHGQPGKEVLLELQVHGFSDSVMGNGRDEMISDRSQMECSSSSSSVVMNGSTGKVIPYVATSNYSQGC SYRAVRTLGLTGLQNLGNTCFMNSAIQCLAHTPKLVDFFLGDYRKEINYENPLGMNGELALAFGDLLRKLWVPGQRPVAP RIFKMKLANFAPQFSGYSQHDSQELLAFLLDGLHEDLNRVKRKPYHEVKDADGRPDEEVAEEYWRNHLARNDSIIVDLCQ GQFRSTLVCPTCKKVSITFDPFMYLSLPLPSTTMRTMTVTVMSTDGIQLPSRITVTVPEYGTIEDLVGAVSASCSPRDDE ILLLAEVYKNKIFRIFDPPSEKLTEIRDQDKLVAYRLKKYNDASTLVIFMHAKRLVEDYVNGRFENVLVGIPVVTRLSSI SYGHDVHREFLKLINPFMMQNTEDMTDEYDQDDDVIEKVHTDDELGDPTGSAALGSDVVSSSGAEDDLIHSSTDFEFYFA SESGIEDKMTLSDPLPDTLSPKGLVVVVFWSDDMLKKYDKNLLGSLPDVFKPQLFTKRTQESISIYKCLEAFLKEEPLGP EDMWYCPSCKKPQQATKKLDLWRLPEIVVIHLKRFSYSRYFKNKLDTFVDFPVNDLDFSAYVAHMNYQSSNRYVLYAISC HYGGLGGGHYTAFVRYGHEKWYEFDDTRVAPANEDEIKTSAAYVLFYRKV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 35 | 35 | - | – | |
| Phobius | 1 | 19 | 19 | - | – | |
| Phobius | 20 | 30 | 11 | - | – | |
| Phobius | 31 | 35 | 5 | - | – | |
| Phobius | 36 | 930 | 895 | - | – | |
| PANTHER | 45 | 930 | 886 | 0.0 | – | |
| PANTHER | 45 | 930 | 886 | 0.0 | – | |
| Gene3D | 325 | 555 | 231 | 1.7E-75 | – | |
| SUPERFAMILY | 329 | 929 | 601 | 1.22E-108 | ||
| ProSiteProfiles | 331 | 930 | 600 | 56.254 | ||
| Pfam | 331 | 927 | 597 | 5.1E-78 | ||
| ProSitePatterns | 332 | 347 | 16 | - | ||
| Gene3D | 756 | 930 | 175 | 2.1E-58 | – | |
| CDD | 783 | 928 | 146 | 2.46402E-56 | – | |
| ProSitePatterns | 873 | 890 | 18 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Ubiquitin-dependent protein catabolic process | The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the protein. | ||
| Biological process | Protein deubiquitination | The removal of one or more ubiquitin groups from a protein. | ||
| Molecular function | Thiol-dependent ubiquitinyl hydrolase activity | Catalysis of the thiol-dependent hydrolysis of an ester, thioester, amide, peptide or isopeptide bond formed by the C-terminal glycine of ubiquitin. |
Expression pattern of LotjaGi1g1v0739200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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