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LotjaGi1g1v0749900.2

Overview

Field Value
Gene ID LotjaGi1g1v0749900
Transcript ID LotjaGi1g1v0749900.2
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description Protein kinase; TAIR: AT5G26751.1 shaggy-related kinase 11; Swiss-Prot: sp|P51137|MSK1_MEDSA Glycogen synthase kinase-3 homolog MsK-1; TrEMBL-Plants: tr|A0A1J7FSZ6|A0A1J7FSZ6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0749900
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:132233976..132237699) extracted from Lotus japonicus Gifu genome v1.2.

GCGGCTTCGGTTGGCGTGGCGCCGCATTCAAGCTTGAGAGAATCCAGTGGTATTGCTGTTGATAGATTACCAGAGGAGAT GAATGATATGAGAATTAGGGATGATAAAGTATGTTTTAGAGTTAGACACTGTATTTTGTTGTTTGATTTTTTTTTAAGTC TGGGGCCTAGTTGCTTATAGCTTGCATCATCATCTTGTAGGAAATGGAAGCTACCGTTGTTGAAGGTAATGGAACCGAGA CAGGCCATATCATTGTAACCACTATTGGGGATGGAAATGATCAGTCAAAGCAGGTACATCTTCTCCCTTATTTTTCCACT AGCATACTATCTGCTGTGGAAATTTGAATGTAGTTGGAAACAACTTAACTACTATAGGTTCTCACTTGCTCTGCTGACTG ACATCCTGGTGCTTGGAAGTTGATAAACAACTAATGCTTTAGTGCGCTTTGGTGTTATTATTTGTGTGTAAATGTCTTCC TTTCCTGTTTTTTCTCGTACTGAATGAATGCGAGTACTGAAAATTGAAATTAGTGTTATCGAATTTCTCCTTGATTTTTT TTCCTTTTTTGTTCCCTCTAGATTTCGGTGTTATGCCAGCTGTATTGCCTGCTAACTTGAATCTTTATACAGTAAGTAGC ATGACCTTGTTATTGGCAAATAAACACGGATTACTAACTGATTGATAGAGCTCAATGGGATATGAATCATATGATATAGT ATATAGCGATATCTAGTGATATCATGCAGTAGAATTTTATCCGCATCGGGATATCATGCAGTAGAATATTTTCTTTTACG AGATTTTGTTATTCAGTTTCTCATATTTTTCTTAAATGTTTATTGCTCTTGAATAACTTAATATCTTTCTAATATTTCAG ACTATAAGCTATATGGCAGAGCGAGTAATAGGGCATGGGTCATTTGGGGTTGTCTTCCAGGTATAGATTTAAACCCAGTT CAGTGTTTTAAACATGGTGACATGTCGCCTTTTATGCTGAATTTTAGTATAATTGTAGGCTAAATGCTTGGAGACTGGTG AAACTGTGGCTATCAAAAAGGTTCTTCAAGACAAGAGGTATAAGAACCGAGAACTGCAGACGATGCGTCTTCTTGACCAT CCAAATGTTGTCTCTTTGAAGCATTGCTTCTTTTCAACCACTGAAAAGGATGAACTATACCTTAACTTGGTACTTGAGTA TGTTCCTGAAACTATTCATCGAGTGATCAAGCAGTACAACAAGTTGAACCAACGCATGCCACTGATATATGTGAAACTCT ATACATACCAGGTATACTTAATCATGACAGTCTGGTTTTCATGATCCTACTGTGAGTTGCATTCTAAAAAATGTATGTAT TAATGGTTCAGATTATTTTCTAGCGCTCTGAATTATTTCTCAATGTTTAGAGTGTGCACTTAACCTATAAGATAAATCTT AAAACCATGCAGCTTTAGTCCAAAATTCCAAGTGGTGCTAATTCTCATGTTTTTCAGATTGCTAAGAGTTAGCTTTGTGT AGCTATGATGTCCCCTGAATTCCCATTGCTTAAATTTGATTACTAGTTGTACAACACTCTGCTTATTTAAAATGCTAGCA ACAAACTCCTTCTACAGACACACTCCAACACACATATTGTGATTGGTTTATTTTTTGAAAAATCAACACACTTCTCTCCG ATCACAATGAGTGTGTTGGAGTGTGTCTTTAAAAGAGTGTGTTGCTAGCACTCCTCTTAATACTATGGAGTTGGGACTGT TGGGTGTGGGTTTGTTATTGTGTTATTATGACGGTAGAGCTGGCTTGGTTAAATGTAGAGATTGATGCAGTGCTATCTTT CCTGTGTTAAGTTCTCATCTTCTGATGTTATAACAGTTTTATTGATATATTTCAGATCTTTAGGGCACTATCTTACATTC ATGGTTGTATTGGAGTCTGCCATCGGGATATCAAGCCTCAAAATATATTAGTATGTATTTCATTCTGCTACTCCTCACAT CGATATTTTTTACTCCCACTTTTTCTTTCAGCTTTCAACTTCTTTTGTTTCATATTTATGGTTGTGTAACTTGTGTTTGG AGTTGCCACAAGATTGGAGACTGCTATAGTGCTATTTCAAACTCTACACACTCAAGACTGTTAGAGAATACTAACTGAAA ATTTCTATGCAGGTTAATCCGCATACCCACCAGGTTAAATTATGTGACTTTGGAAGTGCAAAAGTCTTGGTATGTTTCAT AATTATTGGTTTTTAAGTTTTTGTCATTTCTTCCTGCAACCATATATTTTGGGACTTTAGCTTTGCTGATCGAGTTTACC TTGCTTTGTATTACCTTTGAGTTTGACAGGTAAAAGGCGAACCAAATATATCATACATATGTTCTAGATATTATAGAGCA CCTGAACTTATATTTGGAGCAACTGAATATACTACAGCTATTGACACTTGGTCTGTAGGTTGTGTATTGGCTGAGCTTCT GCTTGGACAGGTTGGTGAGTGATGATTTGAGCTGTTTTGACTTTGGGATTTAGTATATGTGATAATAAAATTTGTGTTTT TATTTTTTATTTTTCCAGCCTCTGTTCCCCGGTGAAAGTGGAGTTGATCAGCTTGTGGAGATCATCAAGGTAATCTTTTT GATCAATTTATTTGTAATGTCTTACTTATTTCCACTGAGCTATCTTTCAAAGTGGTATAGTGGATGGTTCAACTAACTCA ATTACAAGTTGTAACACCATAATGCAGTGGATGATGAATGGTTGATCATGTCTCTTGCTTTAAGCTTTTAACTTTACAAC TGAATTGGTTTACTTGGTGATTCATTTCTTGAATCACTTATATTCCAATCAATTTGACGGGTAGCCTTGACTTTTAACAT TGTGTATCTGTAACACACGAACATGTAAATTACCCTCTTGTTGTTGCTTCTTATAGGTTCTGGGCACTCCAACAAGGGAA GAGATTAAGTGCATGAACCCTAACTATACAGAATTTAAATTCCCACAAATTAAAGCACATCCATGGCACAAGGTATCACA GATGAATTTAATAGCATGTCATGTTGAATATTTTAGCTCACCATATTAATATATCTAGTAATCCCTTGCTGAGCACACCA CACTGATATAAGTTTGTTGGCTTGGTCCTACTAGATATTTCCTAAGCGCATGCCACCCGAAGCTGTTGATTTGGTATCAA GACTACTACAATACTCCCCTAACTTGCGGTGCACAGCTGTGAGTACAGATTTCTTAGCAAGCATTTATAATTTTTATCAA TCTCATTGGTGAAATAGTGTTGTACTGCTCTCCTTTATCATGTAATGGTTGTTTGGAAGTTTTATGGTTTCTAATCTAAT TGTTCAGTGGTTTTGTTTCTCATCGTTCAAAGTTCAATATAAATATATTTTTTCTTTATCTGGTGCAGTTAGACGCCTTG ACCCATCCCTTCTTTGATGAACTTCGTGACTCAAATACTCGCTTGCCAAGTGGTCGTTTCCTTCCGCCTTTATTCAATTT CAAACCTCATGGTATGATAATTTTGGAATAGGCTATTGTGTCGTACTCTGGTTTGTTATTGCTATGATAGTTCATAGTTC TGACTTTGACCATCTGGATATTCTTGCTGCCTGTGTACCAGAACTGAAGGGAGTCCCAATTGAGATTTTGGTGAAATTGA TCCCAGAGCATGCCAGGAAGCAGTGCCTGTTCCTTGGGTTGTGA
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0749900.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGAAGCTACCGTTGTTGAAGGTAATGGAACCGAGACAGGCCATATCATTGTAACCACTATTGGGGATGGAAATGATCA GTCAAAGCAGACTATAAGCTATATGGCAGAGCGAGTAATAGGGCATGGGTCATTTGGGGTTGTCTTCCAGGCTAAATGCT TGGAGACTGGTGAAACTGTGGCTATCAAAAAGGTTCTTCAAGACAAGAGGTATAAGAACCGAGAACTGCAGACGATGCGT CTTCTTGACCATCCAAATGTTGTCTCTTTGAAGCATTGCTTCTTTTCAACCACTGAAAAGGATGAACTATACCTTAACTT GGTACTTGAGTATGTTCCTGAAACTATTCATCGAGTGATCAAGCAGTACAACAAGTTGAACCAACGCATGCCACTGATAT ATGTGAAACTCTATACATACCAGATCTTTAGGGCACTATCTTACATTCATGGTTGTATTGGAGTCTGCCATCGGGATATC AAGCCTCAAAATATATTAGTTAATCCGCATACCCACCAGGTTAAATTATGTGACTTTGGAAGTGCAAAAGTCTTGGTAAA AGGCGAACCAAATATATCATACATATGTTCTAGATATTATAGAGCACCTGAACTTATATTTGGAGCAACTGAATATACTA CAGCTATTGACACTTGGTCTGTAGGTTGTGTATTGGCTGAGCTTCTGCTTGGACAGCCTCTGTTCCCCGGTGAAAGTGGA GTTGATCAGCTTGTGGAGATCATCAAGGTTCTGGGCACTCCAACAAGGGAAGAGATTAAGTGCATGAACCCTAACTATAC AGAATTTAAATTCCCACAAATTAAAGCACATCCATGGCACAAGATATTTCCTAAGCGCATGCCACCCGAAGCTGTTGATT TGGTATCAAGACTACTACAATACTCCCCTAACTTGCGGTGCACAGCTTTAGACGCCTTGACCCATCCCTTCTTTGATGAA CTTCGTGACTCAAATACTCGCTTGCCAAGTGGTCGTTTCCTTCCGCCTTTATTCAATTTCAAACCTCATGAACTGAAGGG AGTCCCAATTGAGATTTTGGTGAAATTGATCCCAGAGCATGCCAGGAAGCAGTGCCTGTTCCTTGGGTTGTGA
Download CDS Sequence

Protein sequence (LotjaGi1g1v0749900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MEATVVEGNGTETGHIIVTTIGDGNDQSKQTISYMAERVIGHGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMR LLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETIHRVIKQYNKLNQRMPLIYVKLYTYQIFRALSYIHGCIGVCHRDI KPQNILVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDTWSVGCVLAELLLGQPLFPGESG VDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFPKRMPPEAVDLVSRLLQYSPNLRCTALDALTHPFFDE LRDSNTRLPSGRFLPPLFNFKPHELKGVPIEILVKLIPEHARKQCLFLGL
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR24057:SF45
1 369 369 5.0E-251 –
PANTHER
PTHR24057
1 369 369 5.0E-251 –
Gene3D
G3DSA:3.30.200.20
18 113 96 9.9E-36 –
CDD
cd14137
29 321 293 0.0
IPR039192
SUPERFAMILY
SSF56112
33 344 312 1.19E-90
IPR011009
Pfam
PF00069
34 318 285 2.3E-65
IPR000719
SMART
SM00220
34 318 285 9.6E-93
IPR000719
ProSiteProfiles
PS50011
34 318 285 44.428
IPR000719
ProSitePatterns
PS00107
40 64 25 -
IPR017441
Gene3D
G3DSA:1.10.510.10
114 362 249 9.9E-81 –
ProSitePatterns
PS00108
155 167 13 -
IPR008271

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0749900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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