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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0760700 |
| Transcript ID | LotjaGi1g1v0760700.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Beta xylosidase; TAIR: AT1G02640.1 beta-xylosidase 2; Swiss-Prot: sp|Q94KD8|BXL2_ARATH Probable beta-D-xylosidase 2; TrEMBL-Plants: tr|G7KSS4|G7KSS4_MEDTR Alpha-L-arabinofuranosidase/beta-D-xylosidase; Found in the gene: LotjaGi1g1v0760700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:133377778..133384869) extracted from Lotus japonicus Gifu genome v1.2.
CTCTCTTTCTTTTGAAATGAGTGGTAACGCCCGTTAGCAAAAACGCAACGCCAATTGGTAACCAAATATACATTTAAATT GTTAAATTATTATGAGCAAGTTGCGTTCTCCTTTTTTTTTCCCCTACCCACCAACTTTATGAAAATCTCACCAGCTAGGC CAAGTTGCTTCATTGCCATGATAAAGCAGTTAAATGGAAAATCCAATCATGACAGTAGTAGTAAGTAGATAACTCACTCT ATACATCCTCATCATCATTGTACCCTGCACAGTATCATTTATACATCACCTCACAGATTATTATTCTATATATATTACGT TCCCCCCATACTTTTCTGCAAGCCCCTTCATTTATTTTTCTCTTTTCCCCCTCAAATGGCCTCCACTTCCTCACCACCCT TCATTACTATCATTACTATCTTCTTCTTCCTCCTCCTACTATTAGGAGTTTTCCGGCACACCGGAGAAGCCCGTGACCCG TTCGCTTGTGACCCGAAAGATGGCACCACAAAGAGCTTGCCATTTTGCAATGTGTCACTGCCGATACAGGAGAGGGTGAA GGACCTCATTGGAAGGTTGACGCTGCAAGAAAAGGTTAACCTACTCGTGAACACCGCCGGTGCGGTTCCCCGGCTCGGGA TCAAAGGCTATGAGTGGTGGTCGGAGGCGCTTCATGGAGTCTCAAATGTGGGCCCCGGAACCAAGTTTGGTGGTCAGTTC CCTGGTGCTACTAGCTTCCCACAAGTCATCACCACCGCTGCTTCCTTCAATGATTCTTTGTGGGAGGCCATTGGACGGGT CAGATTTTCTTTTCCCTACATCTAAATCAAGCAGTCTATAATTAGAGTTTGATCCGTATACATCATTTTTGTGACAGACA TCCGACATTTGCAGTTGAGGAAACCGTCACAAATTACAAATGTTGAGTGTCAATCACAAAATTGGTGTACACGAATCATT TATTAGACAAACTAAACAAATAAAATGCGTTAACTTTTATGTACATTTATATAGATAAGATGAACATATAAAATGCTTTA CATGGAGGACAATGTCTTCGGTGGGTTGGTTCAAAAATGAATCACGGTGATACAGTTACTATTCCCCACTTAAGTTACGA AAATATCCATTTTGTCTTTTCACTTCCCTTCTTTCTCCTTTACTCTCAGCCTCTCCTAGCTAGTATCCAGCGACACGCGC CGCCGCCGCCTCCAACCCCTGCTCCAGCCTTCCACAGTCTCCTCCTATCTATCATCCTTCATTCCTTCTATGGATCCTCT CCCCCACCTAGCCATTTCACCATTTGTAGCATGTAGATTTTGCACATAGTTGAAGAACCCTCCAAAGTTGAAGCTTCCAC GAAATGTCTTTTGAGAAAAGCTGGCATCCGCAAAAAGAAAGTTGAAAACCACACGGGCATGATTCTAAAACTCTGATAAA AAAAAGCACTCAACAACCAAATGCTTAATATCTTAAGAAGGATAACTAGACATTGTTCCTGTTCTGAATCAATTTTCCAA ACATGGTCAACCCAAAACAATGAATCACATCAATTATACAACAAACAAAATCATAATTCCCAGAAACAAGACACGAGCTT GCTTTCCAGAAAAAAAAAAAAACAAGAGCTTAATTCCTTTTTGTTTAATTCTAATTCTCTTTCAATTGAGTAGAGAGAGA AAAACTACACAATGTGCATAAAAATGAAGCCTTTATCATCAAAATGTAAAAGAAAATAGTGAATTTTCAGAGTTTGCTGA AAATAGCCAGAATTGAGGCACGCAGAGAGAGAAGCATGGAGAAAAATTGAAACTTTATGCAAAGAAAGAGGGGGATTGCT TGCACAGTTATAGAGAAAAAAGAAAAGGAGAAAAGGAGGAGGAAGGAGGGCTGCGGTGGCAGCACCATGGACCAAACAGT GGTTAAGGACAGTGGTTCGGCGGAGGGTGAGAGTTGCACGGTGGTGATTCAGTATGGTGGGAAGGAGCTGCGGGTTGGGG ATTTAACGAGAGGGAACAATGGTTGTTGGTGGCTTCGCCATTGAGCTTGAACGACGGTGGTGCTGGGCAAGGAAAATGAA AGATAGAGAAGAACATTCTGGAGAAGAAAAGAGGGTAAAATTGGAAATAAGCTATTAAAGTTAGTTGAATCTGAACCGTT AATTTTTTAATTAATATATCAAAGGTGTTTATTGAGCTGAACTACGGTGATTCAGTTTTTAACTGTCACACCGAAGCCAA CACCTACATGGAGTGATTTAAATATATGTCCACAGTAGTAAAGTGCATGACTTTTGCTTTGGGGTGGTGGTCTTTTTGTC AATTTCTATTGTTTCCTTTTTGTTTTTGCTGAGATTCTGTCAAGTTGGGTTACCATCGCAGTACTTTAATTCTGCATTGT GACCAATAATATAGACCTGCCACACAAAAGTTTCCACAGTGCCCAATTTAAAGTATGGATGTAATAAATATTTACCATAT AGCAATAATAGTTTAGGCGTGACACGAATGTGCACACACTTGTGCTAGCACTTATGGATCACCTTACATTGTTCAACTTG CACATCATGTCTAAAGAGTTCTTATTCGTGTACATAGTTAATTTTTGTGGCAGACATTCGATACCTGTAAACTACAAAAA TGTATAAGTTCGTGAAATAAGAGATTGCATAAGAGAGATTTAACGTATACATATGGGCCTTATACTATGTGCAGGTTGTC TCGGACGAAGCAAGGGCAATGTACAATGGAGGAGCAGCAGGGCTAACGTATTGGAGCCCAAACGTGAACATTTTCAGAGA CCCTAGATGGGGCCGTGGACAGGAAACTCCTGGTGAGGACCCTGTGCTAGCTGGTAGATACGCTGCTAGTTACGTGAGGG GGCTACAGGGAACTGATGGTGACCGGTTGAAGGTGGCTGCTTGCTGCAAACACTTTACAGCTTATGATCTTGATAATTGG AACGGTGTGGATCGCTTCCACTTTAATGCACAGGTGCGTCTTATTAAAACAAGTCTATTTTGAAATTTGAATGCATATTT TTTACTTTATTAATTCTATAGTAACATCTTAATTATGTATATGTATATGGTGCCAAGCATGACGGAAATTAATAATATTG AAAGAACAGTGTGCGGCGCCTTTGTACATTAAGTTAATGCACGTGACTGTGATTAGGTTTGTGATCGGTGATTTATTATT GAACATTGAAATTGAAATTTAATACTACTATTAATAATGTTAATTGTGCAATTCAATCCCAAATTGAAACTTCTGAAGTC CTGCACTCTTTTGTTACATTTTTTCAAACAAACAATTATCCTAAAAGCCGTAGCGATTAGATAATGATACATAAATGCTA ATATTTCTAGCATGCTTTGTCACAGAAGAGTTCAGGCTTGAAGCGTGAATATTGTACAGGCTCATAAATCATATTCTAGA ATTCAACTTTTAATTAGAAGAATTGAAAGTGATAAATACCGAGCTCTAAATTACTTTGAAATATGATTATATTTCTTATA GTACCAAATAATTCCTACACTGTGGGCCCTCTATGTGTGTGTCTTCGGATACTATTATGGATAAGAGACAACTATGACTC GGATGATTGGACGTGAGATAATGTTTGTTTAGTCGTTTTCTTGCTTTGCTTAGAGCTTAATCAACTTATAAACATAGTTA AAATAGAATAATATATACTTAAATATCTTAAGGCGTCATATGTCTAATAATTATCTACTTATAAGGTAAGTGCTTTATCA TGCGTAACATAACATAATGGGAGAAATATGGATGGTTAATAACACAAGCTTCTCAGTTTGACAAGTCAGTTATAGATAGC TCTTCAATTAAAGTGAACTTGCTTAGTTACTTTGAGCTGTTGTTGCACTTTACCATCATGTTGTCGGAGTAATGTTACAC TATATACATTATTCTTGAGTAAATTGAACCTTACTTTAAGATTAATTGCAGGTGAGTAAGCAGGACAAAGAGGAAACATT TGATGTTCCATTCAGGATGTGTGTGAAAGAAGGCAAAGTAGCAAGTGTGATGTGTTCTTACAATCAAGTCAATGGGGTCC CAACCTGTGCAGACCCCAACCTCCTAAAGAGAACAGTTCGTGGACAATGGCATCTTGATGGGTAGGGTAACCTTTCAAAT AATAGAATACCAAATTAATACTCATTGGATGCTCACCTTCTGTTTGAAGAAATGATCCACTCTGAAAAAAATCCTAATCT TTTGCTATTCTGTGGTTTAGGTACATTGTTTCAGACTGTGACTCAGTGGGAGTGTTTTATAGTAACCAACATTACACATC AACACCAGAAGAAGCTGCTGCTGATGCCATTAAAGCAGGCTAGTTACTGAAATCAGAACCAATTTAATGGATTCATTTCT TCACCATTAAAAGAGAAATTGAAGTCCAATTTTTTGTTGTTTGGGGTGTAAAGGCTGCACAGTTGACACACAGAATGAGA TTTTTGTTTTTATCATGTTACAGGTTTAGATTTAGATTGTGGTCCTTTCCTAGGATTGCACACGCAGGACGCGGTGAAAA AAGGTTTGTTAAGCGAAGCAGATGTGAGTGGTGCTTTGATGAACACACTCACAGTGCAGATGAGGTTAGGTATGTTTGAT GGAGAGCCATCAGCTCAGAATTATGGCCACTTAGGTCCAAGAGACGTGTGTAAACCGGCTCATCAAGAACTTGCCCTTGA AGCTGCAAGACAAGGGATTGTGCTCCTTAAGAACAATGGTCCCTCTTTGCCTCTCTCCCCGCAGCGTCACCGCACCGTGG CTGTCATAGGCCCCAATTCCGATGCCACATTCATGATGATTGGAAACTATGCAGGTTAAACTCCTGTTCTTCTTCTTCAA GATTATACATTTATTTTTGTAACATATTCTAATACCATCACATTAAGCGCATTCTTGGAAATTCTTCTAGGATTGATCTG TGTGAATAGCTTCTGATAGTTAGAATTGATTTTGAGAAAATAGAAGCTAATCCAAAAAAAAAAGATTCAGGACTAATGGT CTCTTTACATGCCTTACAGGTATTGCTTGTGGATATACCAGCCCTTTACAAGGAATAGGAAGATATGCCAAGACTATTCA TCAAAAGGGCTGTGATCATGCAACTTGTGCTGATGACAAGCAATTTGGGCCAGCTCTAGATGCAGCTCGTCATGCAGATG CAACTGTTCTTGTGATGGGGTTGGACCAGTCTATTGAAGCTGAAACAAGGGATAGGGTTGGGTTGCTTTTGCCAGGGCAT CAACAAGACCTTGTTTCAAAGGTAGCAGCTGCCTCAAGGGGACCAACTATTTTGGTCTTGATGTCTGGTGGACCTTTAGA CATTACTTTTGCAAAGAATGACCCTAGAATTGCAGGCATCTTGTGGGCTGGCTATCCCGGCCAAGCCGGTGGTGCTGCCA TTGCAGATATCCTGTTTGGAACCGCTAACCCAGGTTTGTGTCTTTGTCATCAAATCTACCTCTATTAATGCAGCTTCAGT TTCATCAAAATCAATTATGAAATCCAATGGTATTCGGAGAAGCTTCTCCTTAGAATTGATTCTACATTATGAATCAATCG TATAAAGATTTCCAAATACGCACTTAATATGTTTGGTTTCACGATAAAATACTTTAGAATCACTTCTGGTGAAGTCTTAA TGAAAAAACTTGACTTAAATTCTATGCAAATCATGAAACTAAACATGGTAAGTGACATACAGTCATACATTGTCTACCTC ACACACAATTTGTGGTGAGAGTTATCACATCTTACACTTATCCTAACCAAACATGCTATATGTGATTCTTATACTAAGCA ATTTTCATTCACTATGCAGGAGGTAAGCTACCTGTGACATGGTACCCACAAGAGTACCTAAAAAACCTGCCAATGACAAA TATGGCAATGAGACCAAGCAGAACAGCAGGGTACCCAGGAAGAACATATAGATTCTACAATGGCCCAGTGGTGTTTCCAT TTGGACATGGACTGACTTACACTCACATTGTCCACACCTTAGCTAGCGCGCTCACGGTGGTGTCAGTTCCGGTGGACGGT CACCGCCATGCCAACAGCACCAACATTTCAAACAAGGCAATTAGAGTGACACACGCGCGGTGTGGCAAGCTCTCCATCGC ACTCCACGTCAACGTTAAGAATGTGGGATCTAGAGACGGCACTCACACATTGCTAGTGTTCTCTGCTCCACCCGATGGTG GTGCTCATTGGGCAGTGCAGAAGCAGCTTGTGGCGTTTGAGAAGGTTCATGTCCCTGCAAAGTCACAGCAGCGAGTCCAA ATCAACATTCATGTTTGCAAGCTCCTCAGTGTAGTGGACAGGTCAGGGATAAGGAGAATACCGATGGGGGAACACAGTCT TCATATTGGTGATGTTAAACATTCTGTTTCACTTCAAGCTGATGCAATTGGAATTATCAAGTCCTGACCAGGAATGTCTA AGTTCCTTTTCACTTGATAATTTGAAAATTTAAATTCAAACTACGTTGGTTCAAAGGAACCATCTATTCAAAGCGCAATT TGTTGATATATATGGATTGGAGTCTCAAGACATGTTAGATTGAGTGATCTTATTAAAGATGTTTAATAACAGAATACTAG GATTTGTTGCAATTTCAGAGAGGAGATTAAGGAAATGTATTATTATTCGAGTGAATCACCATTTTGGTCCCTAAGAAAGT AGTCACCGGTCATATTAGTCCCTAGAGATCATTAATGGTTAAAAAAATCCCTGTAAGTGTTGACGTCGGTCATAATAGTC CCTATCTAAGTTTGACCGTTAGTCCCTGGAACGGAAAGTGCCCATGTGTCACGTTATGTGCCACGTAGGTTTCAATTTAG TCCCCGACGTTATCAATTTAGTCCCTAGGTAATTAAATTTAATTAAAATAATGAGTTAAAAAAATAAAAATACAACCCAA ATTAATCCCATCTTCATCCTTCCCATCACCTTCAACCCAAATTCATCCCACCCAAATCCTGTTTAAGAAAAACATCAAAC CCCAACCCTCAAGCTTGTTTTTCTACCACACTCTTCATTCAATTCATTTACT
CDS sequence (LotjaGi1g1v0760700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAACACACTCACAGTGCAGATGAGGTTAGGTATGTTTGATGGAGAGCCATCAGCTCAGAATTATGGCCACTTAGGTCC AAGAGACGTGTGTAAACCGGCTCATCAAGAACTTGCCCTTGAAGCTGCAAGACAAGGGATTGTGCTCCTTAAGAACAATG GTCCCTCTTTGCCTCTCTCCCCGCAGCGTCACCGCACCGTGGCTGTCATAGGCCCCAATTCCGATGCCACATTCATGATG ATTGGAAACTATGCAGGTATTGCTTGTGGATATACCAGCCCTTTACAAGGAATAGGAAGATATGCCAAGACTATTCATCA AAAGGGCTGTGATCATGCAACTTGTGCTGATGACAAGCAATTTGGGCCAGCTCTAGATGCAGCTCGTCATGCAGATGCAA CTGTTCTTGTGATGGGGTTGGACCAGTCTATTGAAGCTGAAACAAGGGATAGGGTTGGGTTGCTTTTGCCAGGGCATCAA CAAGACCTTGTTTCAAAGGTAGCAGCTGCCTCAAGGGGACCAACTATTTTGGTCTTGATGTCTGGTGGACCTTTAGACAT TACTTTTGCAAAGAATGACCCTAGAATTGCAGGCATCTTGTGGGCTGGCTATCCCGGCCAAGCCGGTGGTGCTGCCATTG CAGATATCCTGTTTGGAACCGCTAACCCAGGAGGTAAGCTACCTGTGACATGGTACCCACAAGAGTACCTAAAAAACCTG CCAATGACAAATATGGCAATGAGACCAAGCAGAACAGCAGGGTACCCAGGAAGAACATATAGATTCTACAATGGCCCAGT GGTGTTTCCATTTGGACATGGACTGACTTACACTCACATTGTCCACACCTTAGCTAGCGCGCTCACGGTGGTGTCAGTTC CGGTGGACGGTCACCGCCATGCCAACAGCACCAACATTTCAAACAAGGCAATTAGAGTGACACACGCGCGGTGTGGCAAG CTCTCCATCGCACTCCACGTCAACGTTAAGAATGTGGGATCTAGAGACGGCACTCACACATTGCTAGTGTTCTCTGCTCC ACCCGATGGTGGTGCTCATTGGGCAGTGCAGAAGCAGCTTGTGGCGTTTGAGAAGGTTCATGTCCCTGCAAAGTCACAGC AGCGAGTCCAAATCAACATTCATGTTTGCAAGCTCCTCAGTGTAGTGGACAGGTCAGGGATAAGGAGAATACCGATGGGG GAACACAGTCTTCATATTGGTGATGTTAAACATTCTGTTTCACTTCAAGCTGATGCAATTGGAATTATCAAGTCCTGA
Protein sequence (LotjaGi1g1v0760700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNTLTVQMRLGMFDGEPSAQNYGHLGPRDVCKPAHQELALEAARQGIVLLKNNGPSLPLSPQRHRTVAVIGPNSDATFMM IGNYAGIACGYTSPLQGIGRYAKTIHQKGCDHATCADDKQFGPALDAARHADATVLVMGLDQSIEAETRDRVGLLLPGHQ QDLVSKVAAASRGPTILVLMSGGPLDITFAKNDPRIAGILWAGYPGQAGGAAIADILFGTANPGGKLPVTWYPQEYLKNL PMTNMAMRPSRTAGYPGRTYRFYNGPVVFPFGHGLTYTHIVHTLASALTVVSVPVDGHRHANSTNISNKAIRVTHARCGK LSIALHVNVKNVGSRDGTHTLLVFSAPPDGGAHWAVQKQLVAFEKVHVPAKSQQRVQINIHVCKLLSVVDRSGIRRIPMG EHSLHIGDVKHSVSLQADAIGIIKS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 425 | 425 | 2.3E-254 | – | |
| PANTHER | 1 | 425 | 425 | 2.3E-254 | – | |
| Gene3D | 32 | 278 | 247 | 1.3E-65 | ||
| Pfam | 47 | 277 | 231 | 3.8E-53 | ||
| SUPERFAMILY | 47 | 279 | 233 | 4.05E-50 | ||
| Gene3D | 305 | 418 | 114 | 2.5E-11 | ||
| SMART | 339 | 410 | 72 | 6.7E-9 | ||
| Pfam | 341 | 408 | 68 | 5.1E-10 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. |
Expression pattern of LotjaGi1g1v0760700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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