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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0760700 |
| Transcript ID | LotjaGi1g1v0760700.3 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Beta xylosidase; TAIR: AT1G02640.1 beta-xylosidase 2; Swiss-Prot: sp|Q94KD8|BXL2_ARATH Probable beta-D-xylosidase 2; TrEMBL-Plants: tr|G7KSS4|G7KSS4_MEDTR Alpha-L-arabinofuranosidase/beta-D-xylosidase; Found in the gene: LotjaGi1g1v0760700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:133378039..133384244) extracted from Lotus japonicus Gifu genome v1.2.
ACCCTGCACAGTATCATTTATACATCACCTCACAGATTATTATTCTATATATATTACGTTCCCCCCATACTTTTCTGCAA GCCCCTTCATTTATTTTTCTCTTTTCCCCCTCAAATGGCCTCCACTTCCTCACCACCCTTCATTACTATCATTACTATCT TCTTCTTCCTCCTCCTACTATTAGGAGTTTTCCGGCACACCGGAGAAGCCCGTGACCCGTTCGCTTGTGACCCGAAAGAT GGCACCACAAAGAGCTTGCCATTTTGCAATGTGTCACTGCCGATACAGGAGAGGGTGAAGGACCTCATTGGAAGGTTGAC GCTGCAAGAAAAGGTTAACCTACTCGTGAACACCGCCGGTGCGGTTCCCCGGCTCGGGATCAAAGGCTATGAGTGGTGGT CGGAGGCGCTTCATGGAGTCTCAAATGTGGGCCCCGGAACCAAGTTTGGTGGTCAGTTCCCTGGTGCTACTAGCTTCCCA CAAGTCATCACCACCGCTGCTTCCTTCAATGATTCTTTGTGGGAGGCCATTGGACGGGTCAGATTTTCTTTTCCCTACAT CTAAATCAAGCAGTCTATAATTAGAGTTTGATCCGTATACATCATTTTTGTGACAGACATCCGACATTTGCAGTTGAGGA AACCGTCACAAATTACAAATGTTGAGTGTCAATCACAAAATTGGTGTACACGAATCATTTATTAGACAAACTAAACAAAT AAAATGCGTTAACTTTTATGTACATTTATATAGATAAGATGAACATATAAAATGCTTTACATGGAGGACAATGTCTTCGG TGGGTTGGTTCAAAAATGAATCACGGTGATACAGTTACTATTCCCCACTTAAGTTACGAAAATATCCATTTTGTCTTTTC ACTTCCCTTCTTTCTCCTTTACTCTCAGCCTCTCCTAGCTAGTATCCAGCGACACGCGCCGCCGCCGCCTCCAACCCCTG CTCCAGCCTTCCACAGTCTCCTCCTATCTATCATCCTTCATTCCTTCTATGGATCCTCTCCCCCACCTAGCCATTTCACC ATTTGTAGCATGTAGATTTTGCACATAGTTGAAGAACCCTCCAAAGTTGAAGCTTCCACGAAATGTCTTTTGAGAAAAGC TGGCATCCGCAAAAAGAAAGTTGAAAACCACACGGGCATGATTCTAAAACTCTGATAAAAAAAAGCACTCAACAACCAAA TGCTTAATATCTTAAGAAGGATAACTAGACATTGTTCCTGTTCTGAATCAATTTTCCAAACATGGTCAACCCAAAACAAT GAATCACATCAATTATACAACAAACAAAATCATAATTCCCAGAAACAAGACACGAGCTTGCTTTCCAGAAAAAAAAAAAA ACAAGAGCTTAATTCCTTTTTGTTTAATTCTAATTCTCTTTCAATTGAGTAGAGAGAGAAAAACTACACAATGTGCATAA AAATGAAGCCTTTATCATCAAAATGTAAAAGAAAATAGTGAATTTTCAGAGTTTGCTGAAAATAGCCAGAATTGAGGCAC GCAGAGAGAGAAGCATGGAGAAAAATTGAAACTTTATGCAAAGAAAGAGGGGGATTGCTTGCACAGTTATAGAGAAAAAA GAAAAGGAGAAAAGGAGGAGGAAGGAGGGCTGCGGTGGCAGCACCATGGACCAAACAGTGGTTAAGGACAGTGGTTCGGC GGAGGGTGAGAGTTGCACGGTGGTGATTCAGTATGGTGGGAAGGAGCTGCGGGTTGGGGATTTAACGAGAGGGAACAATG GTTGTTGGTGGCTTCGCCATTGAGCTTGAACGACGGTGGTGCTGGGCAAGGAAAATGAAAGATAGAGAAGAACATTCTGG AGAAGAAAAGAGGGTAAAATTGGAAATAAGCTATTAAAGTTAGTTGAATCTGAACCGTTAATTTTTTAATTAATATATCA AAGGTGTTTATTGAGCTGAACTACGGTGATTCAGTTTTTAACTGTCACACCGAAGCCAACACCTACATGGAGTGATTTAA ATATATGTCCACAGTAGTAAAGTGCATGACTTTTGCTTTGGGGTGGTGGTCTTTTTGTCAATTTCTATTGTTTCCTTTTT GTTTTTGCTGAGATTCTGTCAAGTTGGGTTACCATCGCAGTACTTTAATTCTGCATTGTGACCAATAATATAGACCTGCC ACACAAAAGTTTCCACAGTGCCCAATTTAAAGTATGGATGTAATAAATATTTACCATATAGCAATAATAGTTTAGGCGTG ACACGAATGTGCACACACTTGTGCTAGCACTTATGGATCACCTTACATTGTTCAACTTGCACATCATGTCTAAAGAGTTC TTATTCGTGTACATAGTTAATTTTTGTGGCAGACATTCGATACCTGTAAACTACAAAAATGTATAAGTTCGTGAAATAAG AGATTGCATAAGAGAGATTTAACGTATACATATGGGCCTTATACTATGTGCAGGTTGTCTCGGACGAAGCAAGGGCAATG TACAATGGAGGAGCAGCAGGGCTAACGTATTGGAGCCCAAACGTGAACATTTTCAGAGACCCTAGATGGGGCCGTGGACA GGAAACTCCTGGTGAGGACCCTGTGCTAGCTGGTAGATACGCTGCTAGTTACGTGAGGGGGCTACAGGGAACTGATGGTG ACCGGTTGAAGGTGGCTGCTTGCTGCAAACACTTTACAGCTTATGATCTTGATAATTGGAACGGTGTGGATCGCTTCCAC TTTAATGCACAGGTGCGTCTTATTAAAACAAGTCTATTTTGAAATTTGAATGCATATTTTTTACTTTATTAATTCTATAG TAACATCTTAATTATGTATATGTATATGGTGCCAAGCATGACGGAAATTAATAATATTGAAAGAACAGTGTGCGGCGCCT TTGTACATTAAGTTAATGCACGTGACTGTGATTAGGTTTGTGATCGGTGATTTATTATTGAACATTGAAATTGAAATTTA ATACTACTATTAATAATGTTAATTGTGCAATTCAATCCCAAATTGAAACTTCTGAAGTCCTGCACTCTTTTGTTACATTT TTTCAAACAAACAATTATCCTAAAAGCCGTAGCGATTAGATAATGATACATAAATGCTAATATTTCTAGCATGCTTTGTC ACAGAAGAGTTCAGGCTTGAAGCGTGAATATTGTACAGGCTCATAAATCATATTCTAGAATTCAACTTTTAATTAGAAGA ATTGAAAGTGATAAATACCGAGCTCTAAATTACTTTGAAATATGATTATATTTCTTATAGTACCAAATAATTCCTACACT GTGGGCCCTCTATGTGTGTGTCTTCGGATACTATTATGGATAAGAGACAACTATGACTCGGATGATTGGACGTGAGATAA TGTTTGTTTAGTCGTTTTCTTGCTTTGCTTAGAGCTTAATCAACTTATAAACATAGTTAAAATAGAATAATATATACTTA AATATCTTAAGGCGTCATATGTCTAATAATTATCTACTTATAAGGTAAGTGCTTTATCATGCGTAACATAACATAATGGG AGAAATATGGATGGTTAATAACACAAGCTTCTCAGTTTGACAAGTCAGTTATAGATAGCTCTTCAATTAAAGTGAACTTG CTTAGTTACTTTGAGCTGTTGTTGCACTTTACCATCATGTTGTCGGAGTAATGTTACACTATATACATTATTCTTGAGTA AATTGAACCTTACTTTAAGATTAATTGCAGGTGAGTAAGCAGGACAAAGAGGAAACATTTGATGTTCCATTCAGGATGTG TGTGAAAGAAGGCAAAGTAGCAAGTGTGATGTGTTCTTACAATCAAGTCAATGGGGTCCCAACCTGTGCAGACCCCAACC TCCTAAAGAGAACAGTTCGTGGACAATGGCATCTTGATGGGTAGGGTAACCTTTCAAATAATAGAATACCAAATTAATAC TCATTGGATGCTCACCTTCTGTTTGAAGAAATGATCCACTCTGAAAAAAATCCTAATCTTTTGCTATTCTGTGGTTTAGG TACATTGTTTCAGACTGTGACTCAGTGGGAGTGTTTTATAGTAACCAACATTACACATCAACACCAGAAGAAGCTGCTGC TGATGCCATTAAAGCAGGCTAGTTACTGAAATCAGAACCAATTTAATGGATTCATTTCTTCACCATTAAAAGAGAAATTG AAGTCCAATTTTTTGTTGTTTGGGGTGTAAAGGCTGCACAGTTGACACACAGAATGAGATTTTTGTTTTTATCATGTTAC AGGTTTAGATTTAGATTGTGGTCCTTTCCTAGGATTGCACACGCAGGACGCGGTGAAAAAAGGTTTGTTAAGCGAAGCAG ATGTGAGTGGTGCTTTGATGAACACACTCACAGTGCAGATGAGGTTAGGTATGTTTGATGGAGAGCCATCAGCTCAGAAT TATGGCCACTTAGGTCCAAGAGACGTGTGTAAACCGGCTCATCAAGAACTTGCCCTTGAAGCTGCAAGACAAGGGATTGT GCTCCTTAAGAACAATGGTCCCTCTTTGCCTCTCTCCCCGCAGCGTCACCGCACCGTGGCTGTCATAGGCCCCAATTCCG ATGCCACATTCATGATGATTGGAAACTATGCAGGTTAAACTCCTGTTCTTCTTCTTCAAGATTATACATTTATTTTTGTA ACATATTCTAATACCATCACATTAAGCGCATTCTTGGAAATTCTTCTAGGATTGATCTGTGTGAATAGCTTCTGATAGTT AGAATTGATTTTGAGAAAATAGAAGCTAATCCAAAAAAAAAAGATTCAGGACTAATGGTCTCTTTACATGCCTTACAGGT ATTGCTTGTGGATATACCAGCCCTTTACAAGGAATAGGAAGATATGCCAAGACTATTCATCAAAAGGGCTGTGATCATGC AACTTGTGCTGATGACAAGCAATTTGGGCCAGCTCTAGATGCAGCTCGTCATGCAGATGCAACTGTTCTTGTGATGGGGT TGGACCAGTCTATTGAAGCTGAAACAAGGGATAGGGTTGGGTTGCTTTTGCCAGGGCATCAACAAGACCTTGTTTCAAAG GTAGCAGCTGCCTCAAGGGGACCAACTATTTTGGTCTTGATGTCTGGTGGACCTTTAGACATTACTTTTGCAAAGAATGA CCCTAGAATTGCAGGCATCTTGTGGGCTGGCTATCCCGGCCAAGCCGGTGGTGCTGCCATTGCAGATATCCTGTTTGGAA CCGCTAACCCAGGTTTGTGTCTTTGTCATCAAATCTACCTCTATTAATGCAGCTTCAGTTTCATCAAAATCAATTATGAA ATCCAATGGTATTCGGAGAAGCTTCTCCTTAGAATTGATTCTACATTATGAATCAATCGTATAAAGATTTCCAAATACGC ACTTAATATGTTTGGTTTCACGATAAAATACTTTAGAATCACTTCTGGTGAAGTCTTAATGAAAAAACTTGACTTAAATT CTATGCAAATCATGAAACTAAACATGGTAAGTGACATACAGTCATACATTGTCTACCTCACACACAATTTGTGGTGAGAG TTATCACATCTTACACTTATCCTAACCAAACATGCTATATGTGATTCTTATACTAAGCAATTTTCATTCACTATGCAGGA GGTAAGCTACCTGTGACATGGTACCCACAAGAGTACCTAAAAAACCTGCCAATGACAAATATGGCAATGAGACCAAGCAG AACAGCAGGGTACCCAGGAAGAACATATAGATTCTACAATGGCCCAGTGGTGTTTCCATTTGGACATGGACTGACTTACA CTCACATTGTCCACACCTTAGCTAGCGCGCTCACGGTGGTGTCAGTTCCGGTGGACGGTCACCGCCATGCCAACAGCACC AACATTTCAAACAAGGCAATTAGAGTGACACACGCGCGGTGTGGCAAGCTCTCCATCGCACTCCACGTCAACGTTAAGAA TGTGGGATCTAGAGACGGCACTCACACATTGCTAGTGTTCTCTGCTCCACCCGATGGTGGTGCTCATTGGGCAGTGCAGA AGCAGCTTGTGGCGTTTGAGAAGGTTCATGTCCCTGCAAAGTCACAGCAGCGAGTCCAAATCAACATTCATGTTTGCAAG CTCCTCAGTGTAGTGGACAGGTCAGGGATAAGGAGAATACCGATGGGGGAACACAGTCTTCATATTGGTGATGTTAAACA TTCTGTTTCACTTCAAGCTGATGCAATTGGAATTATCAAGTCCTGA
CDS sequence (LotjaGi1g1v0760700.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTACAATGGAGGAGCAGCAGGGCTAACGTATTGGAGCCCAAACGTGAACATTTTCAGAGACCCTAGATGGGGCCGTGG ACAGGAAACTCCTGGTGAGGACCCTGTGCTAGCTGGTAGATACGCTGCTAGTTACGTGAGGGGGCTACAGGGAACTGATG GTGACCGGTTGAAGGTGGCTGCTTGCTGCAAACACTTTACAGCTTATGATCTTGATAATTGGAACGGTGTGGATCGCTTC CACTTTAATGCACAGGTGAGTAAGCAGGACAAAGAGGAAACATTTGATGTTCCATTCAGGATGTGTGTGAAAGAAGGCAA AGTAGCAAGTGTGATGTGTTCTTACAATCAAGTCAATGGGGTCCCAACCTGTGCAGACCCCAACCTCCTAAAGAGAACAG TTCGTGGACAATGGCATCTTGATGGGTACATTGTTTCAGACTGTGACTCAGTGGGAGTGTTTTATAGTAACCAACATTAC ACATCAACACCAGAAGAAGCTGCTGCTGATGCCATTAAAGCAGGTTTAGATTTAGATTGTGGTCCTTTCCTAGGATTGCA CACGCAGGACGCGGTGAAAAAAGGTTTGTTAAGCGAAGCAGATGTGAGTGGTGCTTTGATGAACACACTCACAGTGCAGA TGAGGTTAGGTATGTTTGATGGAGAGCCATCAGCTCAGAATTATGGCCACTTAGGTCCAAGAGACGTGTGTAAACCGGCT CATCAAGAACTTGCCCTTGAAGCTGCAAGACAAGGGATTGTGCTCCTTAAGAACAATGGTCCCTCTTTGCCTCTCTCCCC GCAGCGTCACCGCACCGTGGCTGTCATAGGCCCCAATTCCGATGCCACATTCATGATGATTGGAAACTATGCAGGTATTG CTTGTGGATATACCAGCCCTTTACAAGGAATAGGAAGATATGCCAAGACTATTCATCAAAAGGGCTGTGATCATGCAACT TGTGCTGATGACAAGCAATTTGGGCCAGCTCTAGATGCAGCTCGTCATGCAGATGCAACTGTTCTTGTGATGGGGTTGGA CCAGTCTATTGAAGCTGAAACAAGGGATAGGGTTGGGTTGCTTTTGCCAGGGCATCAACAAGACCTTGTTTCAAAGGTAG CAGCTGCCTCAAGGGGACCAACTATTTTGGTCTTGATGTCTGGTGGACCTTTAGACATTACTTTTGCAAAGAATGACCCT AGAATTGCAGGCATCTTGTGGGCTGGCTATCCCGGCCAAGCCGGTGGTGCTGCCATTGCAGATATCCTGTTTGGAACCGC TAACCCAGGAGGTAAGCTACCTGTGACATGGTACCCACAAGAGTACCTAAAAAACCTGCCAATGACAAATATGGCAATGA GACCAAGCAGAACAGCAGGGTACCCAGGAAGAACATATAGATTCTACAATGGCCCAGTGGTGTTTCCATTTGGACATGGA CTGACTTACACTCACATTGTCCACACCTTAGCTAGCGCGCTCACGGTGGTGTCAGTTCCGGTGGACGGTCACCGCCATGC CAACAGCACCAACATTTCAAACAAGGCAATTAGAGTGACACACGCGCGGTGTGGCAAGCTCTCCATCGCACTCCACGTCA ACGTTAAGAATGTGGGATCTAGAGACGGCACTCACACATTGCTAGTGTTCTCTGCTCCACCCGATGGTGGTGCTCATTGG GCAGTGCAGAAGCAGCTTGTGGCGTTTGAGAAGGTTCATGTCCCTGCAAAGTCACAGCAGCGAGTCCAAATCAACATTCA TGTTTGCAAGCTCCTCAGTGTAGTGGACAGGTCAGGGATAAGGAGAATACCGATGGGGGAACACAGTCTTCATATTGGTG ATGTTAAACATTCTGTTTCACTTCAAGCTGATGCAATTGGAATTATCAAGTCCTGA
Protein sequence (LotjaGi1g1v0760700.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MYNGGAAGLTYWSPNVNIFRDPRWGRGQETPGEDPVLAGRYAASYVRGLQGTDGDRLKVAACCKHFTAYDLDNWNGVDRF HFNAQVSKQDKEETFDVPFRMCVKEGKVASVMCSYNQVNGVPTCADPNLLKRTVRGQWHLDGYIVSDCDSVGVFYSNQHY TSTPEEAAADAIKAGLDLDCGPFLGLHTQDAVKKGLLSEADVSGALMNTLTVQMRLGMFDGEPSAQNYGHLGPRDVCKPA HQELALEAARQGIVLLKNNGPSLPLSPQRHRTVAVIGPNSDATFMMIGNYAGIACGYTSPLQGIGRYAKTIHQKGCDHAT CADDKQFGPALDAARHADATVLVMGLDQSIEAETRDRVGLLLPGHQQDLVSKVAAASRGPTILVLMSGGPLDITFAKNDP RIAGILWAGYPGQAGGAAIADILFGTANPGGKLPVTWYPQEYLKNLPMTNMAMRPSRTAGYPGRTYRFYNGPVVFPFGHG LTYTHIVHTLASALTVVSVPVDGHRHANSTNISNKAIRVTHARCGKLSIALHVNVKNVGSRDGTHTLLVFSAPPDGGAHW AVQKQLVAFEKVHVPAKSQQRVQINIHVCKLLSVVDRSGIRRIPMGEHSLHIGDVKHSVSLQADAIGIIKS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 631 | 631 | 0.0 | – | |
| PANTHER | 1 | 631 | 631 | 0.0 | – | |
| Gene3D | 5 | 228 | 224 | 2.6E-71 | ||
| SUPERFAMILY | 8 | 252 | 245 | 3.16E-68 | ||
| Pfam | 11 | 209 | 199 | 2.6E-33 | ||
| PRINTS | 23 | 39 | 17 | 1.5E-7 | ||
| PRINTS | 59 | 75 | 17 | 1.5E-7 | ||
| PRINTS | 133 | 151 | 19 | 1.5E-7 | ||
| Gene3D | 238 | 484 | 247 | 3.6E-65 | ||
| Pfam | 253 | 483 | 231 | 9.7E-53 | ||
| SUPERFAMILY | 253 | 485 | 233 | 1.06E-49 | ||
| Gene3D | 511 | 624 | 114 | 4.7E-11 | ||
| SMART | 545 | 616 | 72 | 6.7E-9 | ||
| Pfam | 547 | 614 | 68 | 9.1E-10 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. |
Expression pattern of LotjaGi1g1v0760700.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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