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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0776200 |
| Transcript ID | LotjaGi1g1v0776200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Histidine phosphotransfer protein; TAIR: AT3G21510.1 histidine-containing phosphotransmitter 1; Swiss-Prot: sp|Q9ZNV9|AHP1_ARATH Histidine-containing phosphotransfer protein 1; TrEMBL-Plants: tr|K7KGR6|K7KGR6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0776200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:134850241..134852040) extracted from Lotus japonicus Gifu genome v1.2.
CCAAGTCCTAGAGGCAGGGATGTGAGTGCTCTCTATATATTTTAACATTTGCCATTTCACTATCCACTTCAAACTTGTGA GTTGTGACTTGAGAGAACAACAATGCAGGCTGTGGGTCACTTGCTCAAGCAGTTAGCTGAATATTCTTCTTCTCTCTTTC AAGAGGTAAGTTATAGCATACAATTTAGCAAAGTATATTAAGGGAAACACAGCTAGAATGAAAGCCTAAGATTTTCACAT GTTTGAGTTCGGCTTCTGTTTCTTGAGAACCAATTATGAAACCTAGCTAGTAGTCACTCACATAAATTTCTGTGTTCTTT CTGCGTGTTTGTATGTTTTATCTGAATCAATTCTGAAACCTAGTAGCTGCTCACAAAAATTTTTGTGTACTCTTTGAAAA GGGATTCTTGGATGAGCAATTTTACAAGCTCCGGCGACTTGAAGATGAAACCAACCCTCACTTTGTGGCTGAAGTGGTCA CTCTCTTCTTTCAGGATGCAGAGAGGCTTGTTGATGAGATGGATAAAGCACTGTAAGGCCACCCCAATTCACTTTTTCTT TTCTTTTCTTTTTTATGTTTTTGGACCTAAAGATTGTATCATTGGGAGGAATCAAACTCTCTATTTTAATGTTGATTCAC CCCAAACAGAGGCCAAGAAAACATTGATTTTCAAAGGGTGGATACCCCTCTTCACCAGCTGAAAGGTTGCAGCTCCAGGT AAATATTCTTCAATCAACTTATTTTTTCTCAAAATCAATTCTGGCACCCCAAATCGATTTTAGACTCATGAAGTCAATTG TATAAAGTTTTCCAAACATGTTAATGACATGCATGCTCCTAAAACAAATTAAAGGTGATAAATCAAGAGAAAGAGACTCC TATTAATAAAGGACACATTTTCCTTCTTGCTTCTGCACTTATAGTTATATGCTGTTTCTACTTTCTACAATAAGATTAAT TTTGATGAGGTTATTGGATTATTGGGAATTAATGCAGCATTGGCGCAGGGAGAGTTTTCAAAGTCTGCGTTCCCTTCAAA AAGTACTGTGAGGAGAAAAATGTTGAAGGGTAAGCTTCAAAATGAACGGATATCAAAAGATTCATACACTAAAGAATGTT GTCAAAATATCATGTCTAATTATTTTTATTCTTTGATATCTGTTTTTTAAAAGAAAAAAGATGTTCATATGCTAATGGGG AAAAAACTTGGTATTCAGGTGCCTGCAAAGCTTGCAAGAATTGAAACAAGAATATGCTATGGTGAAAAGCAAGTTAGAGA CTCTCTTCAAGGTAAGGCGATGAGGTTCTTGTCTTGATCTACATGTTAAATCAGGAGAAATTGTTTCATTGCATGATTGG ATCAGCTTATTTTATCTCATAATCAATTTTAAGTTCTAACACCTAGTTGATTCTGGCTTTAGAATCCATTGTAGAATTTT TTTGAAATATGCAGTACGATTCCATTAATGTTTGCTTGTTTCTACTTCTCTGATTTTAGATGGAGCAGCAGCTTTTTGCA GCAGGCATGGGTTCAGGTTCAACTTCTAGAAAGTGAATGATATGGGGCAGGGATATGTTAGCTGCAATTTACAGTAACCA GAAGAAGAAAGCATCAATCATGTTCAGTCTGCATACAAAGCAATAACTTCGATCTCTCTTGTACTTTTCTCTTTGTTTAT GATTTTGTCATGTCCACCTTGGTGGTTAAATTGGATTTATTATCAGATTTAAACCATATCTAGTCCAAATTACATTTGAA TAACCCTAGTCTCGTTCGATTATGTTTGGATATCCGTTTG
CDS sequence (LotjaGi1g1v0776200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAGGCTGTGGGTCACTTGCTCAAGCAGTTAGCTGAATATTCTTCTTCTCTCTTTCAAGAGGGATTCTTGGATGAGCA ATTTTACAAGCTCCGGCGACTTGAAGATGAAACCAACCCTCACTTTGTGGCTGAAGTGGTCACTCTCTTCTTTCAGGATG CAGAGAGGCTTGTTGATGAGATGGATAAAGCACTAGGCCAAGAAAACATTGATTTTCAAAGGGTGGATACCCCTCTTCAC CAGCTGAAAGGTTGCAGCTCCAGCATTGGCGCAGGGAGAGTTTTCAAAGTCTGCGTTCCCTTCAAAAAGTACTGTGAGGA GAAAAATGTTGAAGGGTGCCTGCAAAGCTTGCAAGAATTGAAACAAGAATATGCTATGGTGAAAAGCAAGTTAGAGACTC TCTTCAAGATGGAGCAGCAGCTTTTTGCAGCAGGCATGGGTTCAGGTTCAACTTCTAGAAAGTGA
Protein sequence (LotjaGi1g1v0776200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQAVGHLLKQLAEYSSSLFQEGFLDEQFYKLRRLEDETNPHFVAEVVTLFFQDAERLVDEMDKALGQENIDFQRVDTPLH QLKGCSSSIGAGRVFKVCVPFKKYCEEKNVEGCLQSLQELKQEYAMVKSKLETLFKMEQQLFAAGMGSGSTSRK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 147 | 147 | 4.9E-72 | – | |
| PANTHER | 1 | 147 | 147 | 4.9E-72 | – | |
| Gene3D | 2 | 148 | 147 | 5.2E-48 | ||
| SUPERFAMILY | 6 | 140 | 135 | 4.06E-33 | ||
| ProSiteProfiles | 39 | 134 | 96 | 15.073 | ||
| CDD | 43 | 125 | 83 | 1.43344E-7 | ||
| Pfam | 45 | 128 | 84 | 1.1E-9 | ||
| Coils | 117 | 137 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Phosphorelay signal transduction system | A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins. |
Expression pattern of LotjaGi1g1v0776200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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