Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0799900 |
| Transcript ID | LotjaGi1g1v0799900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Alpha-ketoglutarate-dependent dioxygenase AlkB like; TAIR: AT3G14160.1 2-oxoglutarate-dependent dioxygenase family protein; Swiss-Prot: sp|P05050|ALKB_ECOLI Alpha-ketoglutarate-dependent dioxygenase AlkB; TrEMBL-Plants: tr|A0A0L9TEQ1|A0A0L9TEQ1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0799900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:137037820..137043664) extracted from Lotus japonicus Gifu genome v1.2.
CATTGCATGATTGGAACTCGCCCCAAGGCCAATTTATACCATTTCAGCCAACATAACATCTACTTAAGCATCAATCGACT ACCCTAGGGTTGAAAGATTCACATAATTTCAAGTTAAATGGTGAAAATCCAAACTTACTTACATCTAGGTTTCAATGCAA TGAATGGGGAGAATGAGTTTGATGAATAGCTTTGATGGAGATGATGGAACCCTTTCCAGATGATGATTGAAGCAAGGAGA GCGTCGGTCTCGAAGATTGAAGAGCAAGGGTTGGGAATTGGGTTTGAAATGAGTTTGGAGCGCTGAAATGGGTTTTGAAA AAACCCTTGTCGTTTACATACTAATATAATACGGAACTTTATCTTCCGTATTGAATACGGAATGTAATTTTCCGTATTCT ATTAAAGGGAGGCTTTCCAGTAATTTCCCCACTTTAAGTGGGGCGCGGAGCCTATAGGGCCCCAAACCCAATTCCCCAAT TTCTGTCGTCGTTTTCTCTCCCCGTACAAACAGAAGATGAATGGTTAACTTGGAGGCAGTGAAACAGACTAAATAAATTA TAAGAGACAGTGTACTGTGTAGAGTAGAGGCGTAAGGTAGTTTAGAAAATAGAGGAGAGTACAGCGGCGGCAGCGCTATG GACGGTCGTGGTCGTGATCGGGGGCGTTGCTCTTCTCCATTCAAACATCCTATTCCTCCCAATTCACCAGCAGCAGTACA TACCTACATACATACATATATTTCCTGTTTATTTATGGTCATGTCTTTTTGGTACGGTTTTCATTCAAATTCTTTGTGTG TAGGTTGGTGGTGGTGGAGGTAGCGGTAGTAATTCGTCATCTGATTACAAGAAGAAGCAAAATTCTTCTCCGCCATCTGA TTCTGGCGAAACCAAGTTGAACATTTTTGATATATGCCCTCCCAAACAAGATGGAATCGTTGTTTTGAACCCTCCTTTGT TTGCAAAGAACCGAGAAAGAAGGAACGAAATGAAACAACGTGGTGAAAGAGGACAAGTATTGAGGGAAGGGATGGTCCTT TTGAAGGGTTACATCCCATTAATAGATCAGGTGAAGATTGTCAAAAGGTGCAGGGATTTGGGGATGGGTAGTGGAGGATT CTACCAGCCAGGTTATGGGGATGGCACAAAACTGCATTTGAAGATGATGTGTCTCGGCAAAAACTGGGATCCTGAGACAA ATCAATACAGTCTCCAACGACCATTTGATGGGGCTAAACCACCCCACATTCCTCCAGATTTCCACCGCTTGATTCAGGAA GCAATCCGGGATTCTCATGCCCTCATTCAACAGCATTCTAAAACTAAAACTAATCCACAACTCATACTTCCCTCCATCTC ACCAGACATTTGTATTGTCAACTTTTACTCACAAGACGGCCAGCTCGGTCTTCATCAGGACAAGGATGAAAGTGAACAAA GTCTTCAGCAAGGCTTGCCAGTGGTATCCTTCTCCATCGGAGACTCAGCTGACTTTTTGTATGGTGATGACAGGGATATG GACAAGGCCAAAAAGGTTGTTCTAGAATCTGGAGATGTTTTGATTTTTGGTGGCAAGTCTAGAAAAATCTTTCATGGCGT AACGGCTGTTCACCCAACCACTGCCCCCAACCTCTTGCTGAAACAAACAAATCTACGCCCTGGCCGACTCAATCTTACTT TCAGACAGTATTAATTAAAACTTCCATTAGCATAGTATACTATGCATGCAACCTACATTGATTATGAAGAAGAAGAATCC CGTGCTAACTTCTCGGTTTCTTTTCATCATGGAGTTTTCTGGCAATGTGCTTGGATAATTCAATTTCTCAACCCCAAGGT AAGTTCTTTCTAGTTCTGTATGTGTGTAATGTATTGCGTATTGACTATTGAGGATTCCCGTTATATCTAAGTATTGTTTT ACGGTTGCCAGACTTAGTATTACATTGTTAACAGAACTACTATTCCTTGAATTCAAACCTTTCTAATTTGCTTCACTGGC TACACTTGGTATTTAACAACAGATATCATCAGAATATCAAATAATAACTTAAGCTTGAATAAACAAACAAGAGCCATAAA TTAAATGGCTATCAATTTGTAATTTACACTTCAACCCGTACCCTTTTTATTCATTTTTGGGTACAAATAGTACCAATTAT AGATCACATTGCCTTGGAAACAGAGCAACCAAGCTTCCACTGTCACTGCTTGGCTCAACCAATTATATAATTTAACTTAT AAATAGCATTGGGGATGTAGTATATTGTAAAACAGTTTATTGTCCTAGAATCAAACTTGGTTCTCCAAAGCTAATGCAGC AGAATCAACATGTACAAGCAAGCAAGAATAAACTTTTTGTTTCAATCTGTCAACTGTCTCCACCAGCCCTTCACTTTCGG AGTCTAAACTGCTTTTTTGTTTGTCCAGCCAATTGTTTGCATGCTTAAGGTGGGACAATGTGAGAGCTATATGGTTTGCC TGAAGCATTTGTCTCCCTGCAATATCCTTACTCTCCTTGCCCTTCTCTTGTGAGCCCACATAAAACCCAGCATCCAATGT CTTCTCCAAGTACGTAAAAAACCATGATCTTGTTTCATTCAAAATGACTTCTTTTAGCTCATTGATCTCTTTTATACCAT CCCCTTTGGCCCATTCTTGCTTCTCAGTGCCTGATATTTCTGTTAAGGGTTTTGGAGCCCTTGACGTGCTCTTAGCAACC ACTAAACCTGTCGTTTTGCCAATTTTATGCTTTTCTGCAGGAGGTTGTATTTTATACAGTTGAAGGGTTCTATCTTTCAA CTGAGTTGTTCCATTTGACTGGCCCATGAGCTGTTGGAGACCATAAAACTTGTTCAGTATGACATGTGGATTCTCTGATG CTGCAGAAGAACAGATATTGGCGAACATACTGAAAAGGAAAGATAGAGGTAATTCCTGAGGGTTAGAAAAGCGTAAAAGG AATGAAGAACTCATTTCCCCACAAGTTAGCTAATGAAGTTTATTTTTTATTCATGAATCAATAAATCATAAAACGTTTAA GTAGCTAATGAGTGTCAAATTTTAGATTAAAACTACCTTAAACACTTCACTATCACTGATGCTGCAGATGCTTCTTTTTG AGCTTCTACTACAACCTGAGAGGCTAGATGCTTCCTTCTAAGAATTCCCTTTGAAATGAAAATAATGTGGAAAGAGGGGA TCATAATCTAATTTATCTCATTTGAATTAGCTAAGTAACTAAACAAGGGAGGTAATTATTTAAAGAGGGAGAAAGTAAAA TTTATTGCACCTTCCCTGGCCTCAATAGTTTGGCTGGCAAAGAGGACCACAGAATCGCCTCAGCAGGATTGCTTTTATCT TGAATACTGGACAAAAAATTGAAGTTTAAATTTTCCTGTTTAGTAGAACTGCGTTTGGTAGAACTAGAAGTGTGCGTAGA AGGTGCCATGACAGTCTGCTGGCTGTTAGATTGACCAACGTCTTGCGTTGGTGAGAGCGCTTCACGTCGAGAACGAGTTG AAGTCATCGGGAGCACCTGTGATGACCAAAACAATCATTATCTTTTTGTTTATATTAGCAAAGGATAGCATCAGCAATAA GCTTAAACCTTGATTCTTTATTCTTTCCTTTAATTTCAAGTTTATATTTTATTCATTTTTGGTGGAATTTGAATCTATGA GCTCATGTAAACTACTCAATCCCCTCACCACTAGTTCAATCCTTGGTTCTTAAGTTTATATTTTATTCTATGACAATCTC TTTGTTTGTTATTATATTTGTGCAATGAAACTATAAATTAAATCATTTTCACCTACTGTTTCTTCCTCAATCTTCATGTT TGCTATACAGAAGTGGTGATATTACAGAATTTCTTCTGATGACAATCCTTCTTTGTGGATGTAGCATTACGTGCTTGTTT ATTAGGGAAAACAAAATCTGTCTACAAGAGTTTTTCTAAGTTTATTGAATTATAGTACGTCAAAATTTTCGTTTGAGGTT CCAATAGTTATTGTCGGATTGCTTTCCATTTCCCAACTATTTCATAGCCACATGGAAGAGGTAAAATCTTACAACCATAC AGTCTAAAGCCTTCATTGAAATTGCAGGTCAAGAATCATACCTGACCTTTTATCTCTTGTTTCCTTCCTTTTGCAGATCT CACCTTCTTACCTTCTACACCATTCTCTAAATCATTTCCTTTGATTCCTATAGAGTTTGGATTCAGAACACCCTGCATAT ACCTGGATGCAACACAAGCCTTTTCCTCTTTAATAACAATCTTCTGCCTTGAACTAGGATTCTCTTTGGCTTCTGTTAAA TCCATGGATTTTGAACTATAAACTGTAGAATTATCAGGATGCACTAATGGCTCCAACATCTGCATTAAATCCTTAGGGTT GCCTTCAAAAGGGTGCCGTCCAGGAACTGGTCTAACCCCAATAAGAATTGGGACGGGTGTGCCAGCCTCGATCCTATCCA CATAAAAGAATTGGCCAAGCTGCAACTTATTATTCAAGATAAGCTCATTGTCTTCCTTTGAGGGCGAGACATAGGTGGAA TGAGAAGAGTCTGAGACTTTAATGAAAAAACCTTGGTTAGGCCATAATTCAGATCCGGACAATGCAGGGACTATGCTGAT CACTTGCAGAAGGACTGAGCGGTATTCCCCGCGAACTTTTACATTAGATTTCATACTTTGGAGAAGCTTCAGTAGAACTC CTGGTATGAGGGATGCCATTCTTTTCCTCTGATTATCTTCAAACTCGTAATTGGTTGAGGTAAACTTAAAATCTCAATCT TATCATAAATATGAAATATAGGCCGGGATAATAAAATGGAAAGCAAGCAGAAAAACATTGAAAAAGAGCATCGTAGTACA GAAGCCTTAAGAGAAAGAACCTGAGAGGAGGAGAATGCCTCTCAATGGCTTGGCTTCCAAAACAGAATGCCTCTCAATGG CTTAACCAAGGACATCTAAAGCTTTGAATGCTAGGCACGTTACCATCAATTTCTCTTGGCTTAAACGCCAAAGGAACCAT TATATAATTAGGCGTGAGAAATATGAAGCACTTATATGAGAAGGGAAATGTCAAATCAGCTCCTTCAGATACATGTAAAA AGATAAAGAAAAAGAAAACTATGCTTTGCCCTTTTAGCAATTTAATTTACGTTATGGTCTCTCTGCCGGTGGGGCTCAGT CTGGTCTTGTTTCGTTTTTAGATTAGAGGCAACGTAACCATTAAGGATGGTAAGGATATTCCCATGTCACTTTCTTGTGT GGCGTCATTTGAAGTCTGAAAATAATGCTTAGAGCATCTCCAATGAATATCATAAGTTAGGATCTTAAAATAAGATCTGA ATTTAATAAGATTTGACCATTAGAGTTATTTTCCATGGCATGAAATCTCGTGTCTTAGCTCAGCAAGCTTCATAAGTGAG ATCTCAAGTAAAATATAATTTTTGTTTCTCAATCATTCAATACCATAATTCAGTAAAATTATCTGCTTTCTCTCTCATGT TGAATTTTAATTATATACCGGTACCGGATGTTTATAAAAAAATTAATTATATATTTCGTCCTATCATGGTAAAATTTAAT TATATTATATATTATTTTTTAAATATTAATTAAGTTGTATTGAATTAATAATTAAATTAAATTTAATATCAAGTGGAAAT AAATAATGTAAATATATTGGGCATTGTGGGTCCAATCAAAAGTAAAATAAGACTCCAACCACTAGAGTGAAATATGCATC AAAACCTTATGAATGCCTTAATGTCTATGTGACAATACGAGCTCACAAAAAGTGAGTTACAAATTAAGATCTCCTTATTG AAAAT
CDS sequence (LotjaGi1g1v0799900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACGGTCGTGGTCGTGATCGGGGGCGTTGCTCTTCTCCATTCAAACATCCTATTCCTCCCAATTCACCAGCAGCAGT TGGTGGTGGTGGAGGTAGCGGTAGTAATTCGTCATCTGATTACAAGAAGAAGCAAAATTCTTCTCCGCCATCTGATTCTG GCGAAACCAAGTTGAACATTTTTGATATATGCCCTCCCAAACAAGATGGAATCGTTGTTTTGAACCCTCCTTTGTTTGCA AAGAACCGAGAAAGAAGGAACGAAATGAAACAACGTGGTGAAAGAGGACAAGTATTGAGGGAAGGGATGGTCCTTTTGAA GGGTTACATCCCATTAATAGATCAGGTGAAGATTGTCAAAAGGTGCAGGGATTTGGGGATGGGTAGTGGAGGATTCTACC AGCCAGGTTATGGGGATGGCACAAAACTGCATTTGAAGATGATGTGTCTCGGCAAAAACTGGGATCCTGAGACAAATCAA TACAGTCTCCAACGACCATTTGATGGGGCTAAACCACCCCACATTCCTCCAGATTTCCACCGCTTGATTCAGGAAGCAAT CCGGGATTCTCATGCCCTCATTCAACAGCATTCTAAAACTAAAACTAATCCACAACTCATACTTCCCTCCATCTCACCAG ACATTTGTATTGTCAACTTTTACTCACAAGACGGCCAGCTCGGTCTTCATCAGGACAAGGATGAAAGTGAACAAAGTCTT CAGCAAGGCTTGCCAGTGGTATCCTTCTCCATCGGAGACTCAGCTGACTTTTTGTATGGTGATGACAGGGATATGGACAA GGCCAAAAAGGTTGTTCTAGAATCTGGAGATGTTTTGATTTTTGGTGGCAAGTCTAGAAAAATCTTTCATGGCGTAACGG CTGTTCACCCAACCACTGCCCCCAACCTCTTGCTGAAACAAACAAATCTACGCCCTGGCCGACTCAATCTTACTTTCAGA CAGTATTAA
Protein sequence (LotjaGi1g1v0799900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDGRGRDRGRCSSPFKHPIPPNSPAAVGGGGGSGSNSSSDYKKKQNSSPPSDSGETKLNIFDICPPKQDGIVVLNPPLFA KNRERRNEMKQRGERGQVLREGMVLLKGYIPLIDQVKIVKRCRDLGMGSGGFYQPGYGDGTKLHLKMMCLGKNWDPETNQ YSLQRPFDGAKPPHIPPDFHRLIQEAIRDSHALIQQHSKTKTNPQLILPSISPDICIVNFYSQDGQLGLHQDKDESEQSL QQGLPVVSFSIGDSADFLYGDDRDMDKAKKVVLESGDVLIFGGKSRKIFHGVTAVHPTTAPNLLLKQTNLRPGRLNLTFR QY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 60 | 60 | - | – | |
| MobiDBLite | 29 | 55 | 27 | - | – | |
| PANTHER | 42 | 322 | 281 | 5.8E-141 | – | |
| PANTHER | 42 | 322 | 281 | 5.8E-141 | ||
| Gene3D | 96 | 322 | 227 | 1.7E-51 | ||
| SUPERFAMILY | 99 | 322 | 224 | 1.28E-36 | – | |
| Pfam | 102 | 320 | 219 | 6.4E-42 | ||
| ProSiteProfiles | 212 | 322 | 111 | 9.739 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi1g1v0799900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…