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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0015700 |
| Transcript ID | LotjaGi2g1v0015700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | RING/U-box superfamily protein; TAIR: AT3G07200.1 RING/U-box superfamily protein; Swiss-Prot: sp|P19474|RO52_HUMAN E3 ubiquitin-protein ligase TRIM21; TrEMBL-Plants: tr|C6T066|C6T066_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi2g1v0015700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:5537151..5548400) extracted from Lotus japonicus Gifu genome v1.2.
TCTCTCTCTCTCTCCCCCTCTCTCTCTCTTTTTCATATATAAATCTTCAACCCTAGACATTCTCTCTCTCTCCCTCTCTC TCTCTTTCTCATTTCAACTTTAGTGTATGTTTATTTCTTTTGATTTTGAGTCTATACGACACAACCACACACACGTATAT GTTTTCCATGTCAATCCTTTAATTTTCATCCCTCGTATCTTGTTCCTTGGAAAATTTTCAGGTTTGCACGAAAAAGATGA GTGCTCCGAATGGCTATACTGTGAGGGCTGCTCGGATGCGTGCTTTAGGGTCAGATCTAAATCGTGCTCGACCGAGAAGG AATCGAGAGGCAGAAGGTCCGTCTTTTCCACCACCAGACCAAATTCACATAATTAATTTGGAAGTGGATGATGATGATGA TATCAACGCCATGGACTCCCCACCTAGGGCTTTTTCTGAGGTATATCGTTTACCAATATCCATCTAAATTAATTTACTAT ATGTTATCTTAGCATAATTATCGTTTTTCTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTG TTGTTGTTGTTGTTGTTGAGTAGTGAATTCATCGAGAACTAGCTTTGAATGCAATATTTTCTTGAACTATGATATGTTAT TCGCATGCATACAGTACGCTTGAAGTAATATAAAAGATTGTCGAACCACATGGATTGGGGAAACACTAATTCACACAAGC AAGAGTTGTTTAGAACAGAAGAAAGTAAAGACAAATTATAGGTTTGATTGGTAAAGAGTTTAATTTTTTGAATCAAAGAA GAAATAATGTTAAGAGCAAGAACTTGGGTTAGCTTCACCAAAACAAGTTATGCTTTAGATAAAAGAGAGTATATGGATTT CATTCTATGCAAGGGCGTATCTACGGAGGGGCTTGCAGGGGTCGTGACGACCCCTGCAATAAATTCCTTTTTTGAATTTG TCATTTCAGCTAAGACATTATCATTCATATGTTTCCCGAGATCTTAATTCAGGAAAAATGTAACTTTATAGCGATATTAT TCTCTTTCAGCTAGATTGATATGTCATGTTTTGAAACTTCTTATTTGAATAGTATCTATATAGCACCCTTTTTCTGCAAC GAAAGTTGTTAAGACTCAAGTTGGCAACAAGATTGAAGATGATCTTCTCAAGAATGTATTAGTTGTACATATTAAAGGAT AAATTGCTAAAAAATATAGTTGATGCAAAATAAATAAATTTAGTATCATTAAAGAACAAAGAGTTGTATTCAAATGAATT TTTATATTTGTTGATGCAATATCCAGCGACCATTTTTAAGTCTTTCATTTCGGCCCCCGCAACGAAAATTTCCATGATAC GCCCCTGATTTTATGATTGATCTAACCTAGTTCTTTAACCGTTGATTCCTCAAGTCAAGTAAAGCTTTCAATTAAATCTC ATTAGAATTATTCGTCAGGTACCTTTGATAAATTATTTGAAGATGAAGTTCTTATTTTCAGGCCATCAACTACCAGCCCC CACCCTCATTCCTAAGGCGTAGGTTAACTAATCAATCTCACCCCAAGTCTCCTATTATAAGCTAAATTTCCATTTGCACT AAGAATAAGTAAAACAACTTGTTTGCACTCAAGATAATATTGAAACAGGGAACATGAACTCATAGAGGAAAACCTCTATT CCATATAAACTCAGAAACTAAAACATAAACAAGTTCGGGATTCACATCCCAAAATCTAGAAGAAACTTAGCCAAGAATCG CTAAGGAAAACATTATTCTAACCTGAGAAGAAGCCTTGAAATACTCCTAAAAACCTTACACAAGCTATTGAGGTATAGAA ATGGTTCTAAGTTCCTCCCAATAGATCCTTTCAACTAAGATTACAAAGTGTGGTATTTATAGTAGAAAAATGATGAGCCA CGCATGTGCGTGCACATCTGGCACGCCCATGCCTGCAAAATGACCACGCTACTAACTATGCACCCATGTGCGTGCCCTTT TCGCACGCACATGCGTGCATGTGCTGACAACTTCAACCTATTTTCGTAAAATGGCCAGTGTGGATTCGTTAACCGTCGGA TCGAGCTAGAATTTTGATATGTTATTCACAACACATAGATCTTCACTCTAACCGGTTCAATCGTCAAGAAAATATCTTTG CTATGAGAAACATGTCACTCGCTAAACAACGCTTCAACTTTCATCAGCTCAAGTTCTAGTCTTTAATGCACTTAAGGTCC TTCATGAGCCTTCATTCCCTTCAATATTATTTTGAAACCTTTCTTCAATCATAAAAATTCCCTTCAATGTGACTTTGAAA ACTTTCTTCCGCCATAAACCTCATCACCTCTTGCTCTTCATCATCAAAGAAAGATTCCCAAACACTCCATGATGAGTATT AGTTAGGGCCGCACACTTAATACACCCATCAAAACTTACTTGTAACAACAAACACCCAATTATGAATATAAAGCATAAGA GAACTAAGACCATATATTAAAGATCATTTCCGATAATGCCCTCAATTCCTCTAACATGCTAGACCAAGGACTAAAAGTTA AAAAGACAAGATTTAAGGTTAAAATTGCAAATAACGATCCTAAAAACATGAAAGGACACAACTAAGCCTAAAAATACTAA ATGAGACTCAAAAAGATAAAAACAAAGTTAAACATAGTATAAACATCATAAAAATTCTGGTCATCAAACTACATGTTGGA CTGGAAATATTATCTCATTATGTTTTTCTTGGAAATACAAATAAATTAATATCATTATTTAAATTCTAAATTCTAAATTA TTATTTTTTATTTTTATTTTATAGAAAATAAATTTATTTGATATGAAAAAAGGAGATGGGAAGATCCCCCATTGAGGAGA TCGAGAAATTCAAATTAAATTGCTACACAAAATGAGAGGGGTGTCCCTATTGTTTCCCGAATTTGAAAGATAGTCTGCAA TAGTGTTAGACTCCCTAAATATATGTCTTATTAGTATTTTGTGTGTAATCGACGTCTGCACCCTACTCCTACAATCTCCA CTGGCGAAAGTCAACAAATTTTTCCTTACGTGTACTCTACCAGTCCTAACCTTTACCTCCGACGTACAAAACTTCAAGAC TCTAAAGAAATAAGCAACGTGCGGAAACCAAGTTGGTTCTCACGGGGATCTTAGTCCTATACATACTCTATTCAATAGTT CCATCAGAATAGTAAAGAAACCAGATACTGGAAAATATGTATAATTGAATTAATGATTCATTAGTTTTCTATTCATATTG AATACTTGTTGAGTAATAAGTAATGGGATTAAGAGGCATGACATTATAGATTTGGGTGAAGGGGAAAGTGTTAAGTTCAA AAAGCTGAATATATCGTTTATCATATTTTGAATGATAACAATTTTGTGAACGCCTGAGACCCTTGTTCCTCGTCTGCTAG GGTTCCTGTAATCCCTATCTCAGCGCCGTCATTGAGCAACACTGTGGCTCAAAGGAGGGACGATTGCCAACGCAAGGGGA GGCTGAGGCTGGGGAATATGAAGCAGAAGGGGAGGATGAAGGCGCGACACGGCGTTGGGCGTCACCTTTACTGGAGAAGC ATATGTTGTTCGTTGACGGGATAACAGATTTGGTGGATTATTCTCAAATCAGGGACCTCTTCGTCTAAGTTGGGTGTGTT GGTAAGGTTTTTGTGCAACGATTTCGCAAGGTGAGTAGGAGATTTTTGATTTGGATTCGTTCAATTTCTGTCCAGACCTC ATGCCGAGGCGGAGATGGCCAGAATCAACGACACCAAGATCGGTGGAGCTCTCTTATTGGTGAAGGAGGCGAGGTTTCCT CTGAGGAGTGGGAAGCGACCTCTTAAGGGAGATTCGATACCTCTACAGAGAGGGCCTTCCGTTATGTCGCATAAGAGCTT GGGAAGGGGAGAAGTCTCTGCCTTAACCTCTCTTTCGTGGCGGGATGTCGCTGTGGATAAAGTTCGACCTCGGCGTGATG GTTCTCTTCACCAGGATGAAGAGTGTATGTTTTCAAGGGATGGGAGTTACTGTGATGAGACATGGAGGCTACCCGATGTT TTTATATTTCTTGAACTGAGGTTCGATGTGCGATTGAAGGCCGGGTGTGCAGATTTGGAGGAACCTAGGGTACCGTTTGT TACTTTGTTCCCGGAGTGCGTGATTAGGGAGCCTAGGACGAAGCCCGTTGTGGCATCGATTGATGCTGAACGATTTGTAG TGGAAGAGGTTTATCGTGGCTCTTCTATGGCTCCTGTACCTACTTTGGCCTCTTTGGAGTGGCTAGTGCAGGAGAATTTA CTGGTTTTTCTAATGGGTTTGGGACAACAACATCTTGCAAGGATTGCTACCCTCCCTTTTGATTCTTTTGGGTTTTGGGT GGCCTCGTTTCTTTGGGACAGGTTTCAGGAGAGCTTTGGAAGGTTGTCTTTTTGTTCTCTTGTCTATTCTACTTCTGTTG TTAATGGTGGTGGGTGCGTTGGTGATTTTGCTAGTGATATGGGGGAACAGGTTCCTTGTGACGCTGCTATTGAACCTCCA AGGGCTTTTTCCCGCCGTCAGGGACGGCCAAAAAGGGATGTTGCGTGTGATATTGTTTCGGGGGAAGGAGTTGTCAGAGG TAGGTGCCCTATTTTGTAGGTACCCCACTCTTGTGGGTGACTGAGGAGAGTGAAGAGCACGGCGGGTGATGTGGATGGTG TCTTTACCCCTCTGTTAGGGTCATCAGAGGGTGTTCTGATTTCTATGGATACCTAATTGGTTCTTTTTTAGCCGGAGAGC CCCAGGTGTCCTCCACGAGTGACTCTTTCTTGTTCTGATGAGGTTTCTCTTCAAGGCATAACTGATAATATTAGGGCCCG TAGGCTTAGTCGAGGTTAAGTAGTTGATCTCCTATGGGATTTTTTCGTGGTTGATTGGTCGTCTTTGTTTGGTTTCTCGA GTTTCTCGCTTTTAGGGGCTGTTTATAGCATTGTTCCTTTGATGATTAGCTTTTTGTATCACTAATCATCATTCCCCCCT TTGTATTCATTTGAGATTCGCTCTCAAATCTATTGGTATACCCTTTTGCTTAAAAAAAAAACAATTTTCAAGAGTGCAAA TGAACTTACTAAATATATTATGTGAATTGCATTTTAGGAAATTACTCTTGTACCCCTCAAGCCATATCGTCTAAAGAAGC AATGCAAGATGATGAGAAGAAGATAAAGAAGAGACTGGATAAATGAGCAAAGTTATGCAAGAAATCAACCCAGTCAAATG CAAGCAAGGACAAAGCTACAAAGCAGACTTCAAGCAAAGAAGAGTCACATCTGCTAGGATCGTCTTATCATGGAAAGAAA GAAAGAAGAAAAAGAATGATTAAAGCTCAAGGCTTCATGAACTAACAAGGAATGGTACAACTACAAGATCATCTAAGGAA AGGAACGCTATATCTGTCTGATCGAAGGAGGAAGAAGAAGAGATCAAAGATATAAGAAGAGCTAACTTATCAAGATCATC TTCTGAATACAAAAGCTCAAGCATCAAGCCAATCAACACAGTATGAGTTAAAGCTTCAACAACACGCTATCTGAGATCAA GTGATGTCATTAGATCGTCTGAGAAAACTGCAAGCAACGTCTACTGCTCAACGTCTATCTCTAGGCTGACCAAAGGAAGC AATGTCTAGAGAAAAGAGCATCATAGTCAATTGGAAATATCTCGGACATTCTTGAAGAGAAAGTCAAGCGGTCTGCATCA CGTGATACTCCACAGAGCAGACTGACCAAGGAAACAAGTAAGGAATGTCAACATCAAAAGTTTCCTTTTTCTCTCTCATG CGAAGAATGAATAAAAGCTTCTTGTTTACACCTACTGGCAACTATCTGATTCAGGCAAACTAGACAATCCATTTCTAATT TTGAATGAAGAATTTGATCAAAACTAACACTCACAATCTGAATGACCAATTGAGGAATGAGGCATACGCTAAACTGATAA GTCTTCTGAGAGAATAATGGCAAAAGCAAGAGACATTGTCTGATCGAAAATAGAAGAACGATGTAAGCAGAACGTCTGAA GCAAGCAACATCTACCATATGAAGACTGTTGCGTCAGAAGAAAAGAAGACAAGAGTTTAACAGAAGATCACCTGAAGGAA AGGAGAATGAATCGTCTAAAAAAACTATAGAACGATGAAGAAAGATCGTCTGAAGAAAGGAAAGGTGACAGAAGCAGAAA AGTAATCAAAGTAGATAATCTGACTAGAACAAAGCTTATCAGAAGATTAGAAGCTGCAAAGTCTAAAGAATGACCGTTGA AGACAAATTACAAACGAGCTCAGAATTAACTTCTTGAAGAGGCCTTTGCAAAGTCGAAACACAACACAAAGCAAATCAAG AAGTACACAGGTATTATTATCAGATTTCTATATCTATACACCAACAAATAGAAGCTCATACCTACGCTACCTACAAGCAG ACAAAATACATCTTTTCGGTGAAAAGTCTCAATCAAACAGTACTATGCTAGCAACGCATTTGAATCAAGTAACAAATCAA CCGTTTGATCCAACGACTAGAAGCTTTGTGAAGAACACGCTCCAACGGACTACAACAACTATCTTTCACTCACAACAGAT TCAAGAGTATAAATTGAAGATCTGAAGACTTGCAGAACCAACGCTTATGCTCACCACCATGATTTAACTTAACAACTCAA CTCAATTAAGCGTAAAAGAAGACACAGAGCTCATCACTCATAAACGATCATATACATCGTCTGCTTCAACATGAGGAGAA GTTTTATTTAAGCGTCAAATCTATAACTTACTCTTCATGAACTCAAATTTTTCTACTAACACTCTTAGAAGAGGAGATTA AGAGTAGAAGAAGACAATCTAGAGAAAGATTGTTTTGGGAGAAGTCTTGAACAATACTTGTTGAAAAGGAGGAGTCATTC TAATACTTAGTAGGAGGAGTCCTAATAATACTTGTAAGGAGGAGTCCTTCGAATACTTGTGCCTGGAGAGGCAGGGGCAA AAGAATACTCAACAATGTTTGGCGAGGAAATGGCTAAAGAAAACTTGCTAATGCGTGAAGAGGTAGTGGGAAAATAATAC TTTTGTTTGCCTTGAGAGGTAGTGACAAAAAGAATACTTATTATGCTTGAAGAGACATGTACAATAATACTTGTATGGAG AAGTCCTTGATACTTGGTTAGTGAAATCTCAGTGATGCCAATGACTGGATGTAGCCCTATCATTTAGGGGCTGTACCAGG ACAAAAATGTTGGTGTGCTTCGTCTACTTCCCTGCTGTTACATTTCCGCTGCACCAAACGATATCAACGAAGATGGTGAT TCCTTATATCGTTTGGAAAATCAAATTTTTTATGAGTACAATTCAAACCCTCCCTTTCTTATGCTATCTCTGATCAACTA CAAAAAGATATTCAAAGAGATGAAGATTGAGAACCTTGCTCTCAGGTTGGAGAGAATAGAGAGCTTCTCACCCGACTCCT AGATCTTCAGACATGAAAATGAAGACTCTTGGACAACAATGGTGCTGGAGGTGCGTTTATATAAAGCTAGGTGTGATTAA TGAAACAAATTTGGATTATCTTCCCTAAGTGTTGCACCACCAATGCTTCGTCATGTGCCTTGATCCTCTCCTAATGTGAC TGGTTTGGGGGTTCATTAGTTAACCCTTAAGTGGTCAAGGTGTTCAAAGACCATTTATGGAAGATCCTGATGATGAATAA TAATTTCCAATCAAGCATAGTACTGAGCTTCTCCCAGTTGGCCAAGAGTTTATATCAGATATATATGATTATGTTTCCAA AACAAATTATATGATTATGATTATGTTTCATATCGCTGAGACTAGATCTTTGAGACACCGGTTTCCAGGGTCTTAGGTCA CTGACCTTTCTCTTGCGTCACTAACTTGAGGTGATGACATTCACCATCGAGAAACTAGACAGAGCAGTTTAGAGATTCTA TCATCATTGACTCAAGGCCATCACCAGAGGTTTGATGATTATTAGGTCATGGGCTAGTGACTGAAAATGAACCTGCCATT GATACAAAATGTAGACATATACTTTTTTTTTTTTTTTTTGATAAGCCAAGAAAATATATTGAATGAAGTACTGTATATAT GTATATACACATTCACATGATGCACAAATGATAAATGTGATGGATTTGAGGCTGACCATTGACTTTGCTCTCTCTTTCAC ATTCCCTCCCTCCCTTTTTATCATGTCTCTGTCTTTGATTTTGGGAACAAGATAGATCATAGTATTTCCTTTTTAAGTAA AATTTAAAAGGCAAAATAAAATGGTGCTTGCTACGATACCACAACACTTGTGTGGGTATGATACACGAAAAGGTTGTGGA CCAATCACATCCTCCGTATTTAAAAAGAAAAAAATGAAAATATAAATTATTTTTGTTGTGGACCAATCACATCCTTCATG TATGATACATTGTGGGTATCATAGAAACCACCAAATAAAAACAACTTATGAGATTCTCGTGCCAGTTCTATACGAGTGGG TTTTATTATTGGTCTGTTATCTACAGCTTTACCTAGGTTGATTCTCCAACTTGAACATGTGATCATTTAGTCATATACTC CAATAGGAACTTCTATCGATATAACTACATCTCACCTTATTATTATTAAAGTTATGATATTTTGAAACATTGTTACTTGT TAGAAACTGATATTAAATGTTTTTTTGTGTTTTTCTTGGTTTAAGGTCGGGACCGCAAGGAGGACTCGCAGGAGGACTAA CGGTATTGTGGAATTGCGTAAAGTGTAATTAATTTTAAAAATATTGGTGAAATATTTTTTTTGTGAATTTTCTTTCGTAC TGAGTTTGGATATTGAATTGATCATTTCCTTTTTGTTGGTGTTGTTGTTTTTGGTTTTTTTTTTTTTTTATTTAATTTTA TGTAGACGTGGGTAGTTATATGGGTTTGGATGGTTTTCATTTAATTACAAATGCACATTATTGTTTTGTTGACTCATGGT GCTTGACTCCATTTTTTTCATCATTATAGTAGTATCTTTCTAGTGACCAAAATTACGTTTTCCCAGGAAGACTCTACTAT CTTCTTCAGGTTGAGTAAGTTTATGACCCGCAATAACCTCCATCTATGTCTTGCCTCATGAAATTAGATATGAGTTTTCC TTAATTACAATGTGAGTTTTGGTTTTAAATTACATGATTTCAATCTTGAAAGGGTTGAAGCAAAAAAAAAAAATTTGGCT TAAAGAAATTGTTGATCTTTTAACTTTTGACAATATTCATTTCAGATTTTTTTTTTTTGACAATACTCTTATTTTATTCA ATATTATTTTAGCATTTCACTTCACTATTCATTTTAAGTTGCCTACTGCTCATATTGCTGGTATCCTGGAAAATGTCCTT CTCCAAACAATTAATGATGGGGACTTTTTATTATTCTTAGTTATTTACTGAAGTATCTTAGTACTAATGTTATGGTTTAA CATATCTACAACTCATGATCATTGTTGCAGAACAATCCACAACAGCTGATAATAATACCCTTAGACGCAGTAAAAGAGTT CTCGAAAGAACACAAGTTGTTTCAGAAGGATCTAGCAATTCTATGGTAATGAAAACCTAGCTTCATGCATTCATTTTATT TTATGTGATTATTTTTTCTTTTATTTTCAATATCAATTTGATGTCAAACACGCACATATTAAGAATGTAAAGTCAAACAA ATCAACATATATTGGCTTCATTATACTACATATAAAAACTTAATTTTGTCCATCATTGATTCATGTTTACGTGCTTCAAA CATAGAAATTTACATGTTTTCTGGATGAAAAAAATCTTAGTGTGAGGGGAGTGCCCCAACTCAACACAGAAAATTTAAGG GTTCAAAGAGCACATATGTTACACTTACATTTACCTCACCTAAATGAGAGGAGTGGGGTTCGAACCTGAAACCTGTCAAA TACAAAACCTTATCGTGCTCTACTCGACCAACCCCTTTGGGTTATATAATTTTACATTTGATTCTAAATGTTTGTTTGAT TTCAAATTGCTGACTTGAGTATTTCTTTTACATAATGAAAATGCTCCAAAGGTACCTGAGCTTCCAAGCGAGTCAATGTT TAAATGCCCAATATGTATGGATCCTTTCATTGAAGAAATGTCTACAATGTGTGGTCACATTTTCTGCAAGAAGTGCATTA CAACTGTTGTAGCAACACAAAGAAAATGCCCTACCTGTAGGAAAATTATTATCATGGAAGAGCTTAGAAGGGTCTTTCTT CCATATCCTAATTGAAGGTATGACAAATTAAACTATTAGTTTAATGAGTTAGATGATGTTTTTTTCATGTCAGTTTGATA TTATAGATGTTCATCCATGAAGCATGGATATCTTATTTTGGCTATCGTACATGTACCGGGTACCGGTACTCTTTGGACCC TTCATGATCTCTTTTTTTCTTGGTGGGTTCTCTCCATGAATTTTTTGACAGTGGATAAATGGATAAATTTCAATTTACTT GCTTGCCATGTGGACAAATCTCCATTTATCTTATAAGCTCAGGTTTATAATTACAACAATTTATGTGATAATTTTTTATT CTTTAAGTGTTTTTCTAACTTGTTCAAAATATAATCTCTTATGTTTGTGTGGATATATGCATATAACTCTATGTCATATA TGCATATATACCCGTACATAAGTTTTTAAAATATCACATACCTCGCAGTCATATCCCTACCCAGTACCGGTATTGTACTT GTACGTAACATAGATGTTCAAAGTAAAAAAGAAAATCGTTCGGTCTAATTAAATTTTGGATCAACCTGGATTCTAACTTA TTTCTATTTTACCATGAAATAGGATCTCATTCGAAACCTTACTCAGAAAAACCAGGATTGGGAGGAACTTCATTCTAGTT CGGACATCTCATTCAAAGTTGTCTCTCGTTACTCATTTGTTAAACCAATTCATGGACGACATGACTTTTAGACACAATTC GATGCTCATTTTATCTGAGAAATAATTTTCAGCAGAGATTTATGTACAAGTTTATTTACAGGATTTTATCTCATTGTATC TAGCAAGACTAGCTGTGAGAATATATATTTGTGTAATTTTTTTCGAAAATTGCACTGCCAATTTGACATGAATTTGAGTT CACATACTTGTTAAGTGTAGTTCTCTCTTCAGATTGTTGCAAATATTTAT
CDS sequence (LotjaGi2g1v0015700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGTGCTCCGAATGGCTATACTGTGAGGGCTGCTCGGATGCGTGCTTTAGGGTCAGATCTAAATCGTGCTCGACCGAG AAGGAATCGAGAGGCAGAAGGTCCGTCTTTTCCACCACCAGACCAAATTCACATAATTAATTTGGAAGTGGATGATGATG ATGATATCAACGCCATGGACTCCCCACCTAGGGCTTTTTCTGAGGTCGGGACCGCAAGGAGGACTCGCAGGAGGACTAAC GAACAATCCACAACAGCTGATAATAATACCCTTAGACGCAGTAAAAGAGTTCTCGAAAGAACACAAGTTGTTTCAGAAGG ATCTAGCAATTCTATGGTACCTGAGCTTCCAAGCGAGTCAATGTTTAAATGCCCAATATGTATGGATCCTTTCATTGAAG AAATGTCTACAATGTGTGGTCACATTTTCTGCAAGAAGTGCATTACAACTGTTGTAGCAACACAAAGAAAATGCCCTACC TGTAGGAAAATTATTATCATGGAAGAGCTTAGAAGGGTCTTTCTTCCATATCCTAATTGA
Protein sequence (LotjaGi2g1v0015700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSAPNGYTVRAARMRALGSDLNRARPRRNREAEGPSFPPPDQIHIINLEVDDDDDINAMDSPPRAFSEVGTARRTRRRTN EQSTTADNNTLRRSKRVLERTQVVSEGSSNSMVPELPSESMFKCPICMDPFIEEMSTMCGHIFCKKCITTVVATQRKCPT CRKIIIMEELRRVFLPYPN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 17 | 43 | 27 | - | – | |
| MobiDBLite | 20 | 34 | 15 | - | – | |
| PANTHER | 36 | 176 | 141 | 6.0E-38 | – | |
| MobiDBLite | 60 | 91 | 32 | - | – | |
| Gene3D | 71 | 174 | 104 | 4.1E-18 | ||
| SUPERFAMILY | 123 | 167 | 45 | 1.39E-17 | – | |
| Pfam | 123 | 162 | 40 | 1.2E-10 | ||
| SMART | 124 | 161 | 38 | 1.4E-5 | ||
| ProSiteProfiles | 124 | 162 | 39 | 12.991 | ||
| ProSitePatterns | 139 | 148 | 10 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0015700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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