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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0019900 |
| Transcript ID | LotjaGi2g1v0019900.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pentatricopeptide repeat-containing family protein; TAIR: AT1G66345.1 Pentatricopeptide repeat (PPR) superfamily protein; Swiss-Prot: sp|Q3ECH5|PP107_ARATH Pentatricopeptide repeat-containing protein At1g66345, mitochondrial; TrEMBL-Plants: tr|A0A1J7GQK9|A0A1J7GQK9_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0019900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:7265739..7274648) extracted from Lotus japonicus Gifu genome v1.2.
GTGATCTCAGCTTATCAAGGGAATTAATCTCATATCTGCAGCTCTAGAATACTTGATATAACAAAAAAAGAAAATATTGT AAGTGTCAACCTTGAACAAATTTTTAGGAACTAAAATTCATCAACACAATATACCTGTGAAAATCCCATTAAAGCAAAGT CTTAATTTCTCAGAAAAGGGTCTGGGCACAGTCTCACTCATTCCTCACACCAAAATGGTTTTCAATTCCAATTCCTTGAA GCTATTGAGCCGAGTCAGTTTCCACAAACTCCACTCGCACACAGCATTTCCAAGGAACTCAAATCACAACGCCGTCGACG ACGTCGCCGCCGCAATCTGCGACTCCTTCAGAAGACGACGGAGCTGGGACGCCGTCAGCCGCAAGTTTGGCTCCCTCGAG TTAAACGATTCGTTAGTAGAGCAGGTCCTCTTGGAGCTCAAAGACCCAAACGACGCCAAAACCGCTCTCAGCTTCTTCCA CTGGTCCGCCAAAACGCACCGTTTCAACCACGGCGTTCGCTCTTACAGCATCGCCATCCACGTTCTAGTCAGAGCCGGTT TAATCACCGACGCTCGCGCATTGCTCGAATCACTCGCGGCCAAGAACCGCGATCCCGGTGCGGTTCGTGCGGTTACCGAC TCGCTGATCGACGCGGTTGGTTTTGTCTCCGGTTCGCACCGTCCGGTGCTTGACCTCTTGGTCCAGACCTACGCGAAGAT GAGGCTCACGGAGGCTGCGTTCGACGTTTGCTGTAACGTCGAAGCGCGAGGGTTTCGCGTGAGCCTCGCGAGTTTTAATT CTGTGTTACACGTTCTTCAGAGATCTGATAGGGTGTCGTTGGTTTGGGATGTTTACGAGCACATGATTCGTGGAAGGAAT TACCCTAATGCGGTTACTTTGAAAATCATGATTGATGCTCTTTGCAAGGAGGGGCTTCTGCAGCGGAACGTGGACGCTTT GGATCGAATCATGGGGGAAAGGAAAAGGAGTTCGCATTCGCCTTCTGCGATTGTCAATTCGAGCTTGATATTGAGAATGG TAGAGAAAGGGCACTTGGTGGAAGAGGAGGGAAAGCGCGAGCGTGTGGCGGTCATGGTGGTTACATTGTTGAAGAGGCTG TTACAACAGAATTTGGTTCCTGATTCGGTTGGTTACTCTTTGATTGTTCATGCCAAGGTTAGGCTGGGGAGTTTGGATTC TGCATTGGAGATGTATGAGGAAATGGTGATGAGTGGTTTTGAGCCTAATTCTTTTGTCTACACATCGTTCACAGGAGGGT TTTGCAAGGAGGGACGGATTGATGAAGCCATGGAACTAATGCGGGGAATGGAAGGAAGGGGATTGAAGCCTTACGGTGAG ACGTTCGATCATGTTATCATTGGTTGCGCGGCGGGTTCTGGAAGGTTGGAGGAGTGTTTGGGTGTTTTTGAGGCAATGTT GGGTGCTGGGTTTATTCCTAGTTGTTTGTCATTTGATAAGATGGTAGAGAAGCTCTGTGAGAACCGGGATGTGGAGCAGG CAAATGCGAATTTGACAAGGTTGTTAGACAAAGGGTTCTTGCCTGGTGAGACTACTTACTCTCTTTTGATCAAGGGCTAT GCCGCAAAGGGTGAGGTTCAGGAGGTTCTCAAGCTGTATTATGAAATGGAGTACAAGTCCATGTGCCCTGGATTGTCGGT TTTCACCTCGGTAATTCAGTGTTTGTGCCGTTGTGGAAAGCTTGAAGATGCAGAAAAGTATCTAAAGACGATGAAAAGTC GTTTGCTAACACCAGATGTGGCTATATACGAGACAATGATTGCCAGTCATGAGCAGAAAGGCAACAATGCCAGGGTTCTT CAGCTTTGCAATGAAATGGCTTCTTTGGAGTTGTAATTTAGGGAGGATATCCCTGGCTCATTATTAGAAAATCACTTACT CTGGGCTTATAGCTTTGAGCATGAAAGAGGTGAGGGTAGAAAGCCTTTCTAAAGCTAGTGGTTGCTGTTTTCCTGAAAAA GAATGTAAGTAATACCAGGCTTGTTAATAGCGCTATAGCGGCGCAATAGCCTATAGCGTAGCGGCCTGGGGGTTCACTGC TACTCCACTATTCACCGCTATTTGCGCTATTCTCCGCTATAGTGCCGCAATAGCGCTCGAAATAGCGTTTTTAGGGCTTG CTGCTACACTACGCTATCCGCCATTAACAACCCTGCACACTCTGTTTTGCGCTTTTTCGAATAAGTTTATTTTTTAAAAT AGTCAATTTAGTTTTGTCTTAATTGATTGCTTCCTGAAAACGTATTGACTTATTATGAAATGAACAAGTTTTAAAGAGTG TGTTCAAGAGTGTGGAATGGGCTGATGAGTATAAATTACATCTTGTGCAGATGCTTTTTCAATTGTCTCTTGTATTACTT TCCTAATTTAAAATTGTCTTTTGGGGGGGGGGGGGGGGGCGTTGTTTCGTACATTGGGGAGAAAATGTAATGTTTGACTT GACACAGATAAGGAAGGGAGGTTTTGAGGCTTTCAACATTAAAAATGTAGTGTTTGCTCGCAGTATTTTCCTTGAAATTT CTTGCCTCCATCTGATTTTTGATGTAACTTGCAGTTCTATATTTTTGCTGTGGTTGAGGCCTTATTATTATAGTGTTGTG ACAGCCTGCAATTTTCATGGGGATCAGATCTCTTGATGGTTGTCTTTAAAAAGCAACCTTTTCTTGTCATAAACATAGTA TTTGTCCTGTGTCCTTTTAATATGTTATTGTCATGCTATTGTTGATGCAGAAGTTAGGTTGGGAAATTTGAGTTCTGCCT ATGATGAGAGGTTTTTAGCCAAATTCTTTCATGTACACATCATTTATAGGAGTATTTTTCCATGAGGTACAAATTGAAGA AGCCGTTGAGTTGATATAGGAAATGGAAGGATAGGCTTTGAAGGCTTATGGTGAGACTTTCCATCATGTTGTTGGATGCA TGAATTCAGGATGGTTGGAGGAGTGCTTGAGTTTTTTCAAGAAAATGTAGTGCTGGGTACTTACTTCCCTTTATTTGCCA TTTCATAAAGATGGTGGAGAAGCTGTGCCAGAATGAACTGTGGAGCAGGCAAATGTAATGTTGACAATGTTATTAGATAA AAGGGTTATTGTCTAGTGACGTGACTTACTCCCATTTGTTACGTGATTATGCCACAAAGGTGAGGTTCAGGAAGTTCTCA AGCTATATTAAAAATTGATTTCAGGTTTCTGCGCCCCTTGGTTTTCTGTTTTCGCATGGATAATTCAGTGTCTGTGCCAG CTCAAGAATGCAGAAATGTGTTAAGGATCATGAACGGTCGTTTCTAGCCCCAGATGTGACTGTGTACATATGACATATTC AATACCGGCCACACGTGCAGAAGGGCAACCGTGCCCTTTGGTGCCAGAAAGAGGTGAAGGTAGTTAGCGTTTTGTAATCA GTGCTAGTAATAAACACACTCTTTTTGACATTAACATGTAAATTGATCTCTTTTTAAAAAATGTATTGATTTTTTAAGAA TTGAATCAATGATAAACAATTAATTTCTAACATTTCTCATTCAAACGGTTGTATTTGTTACATGGTTCTTTCAATGTAAA ATATCAAATCAGTAATATGATATTTTATTTACTGAATTGTTTTGGCAGCTGCTCTGGAAGAACTGAATGCTGCACCAAGA GAATGTTAGCAACTTGTCGAAATGGGCTGATATGTATAAATTATTACATCTGATGCAGGTGCCTTTCAATTATTCTTTTC TTTGTATTATTTTCCTCATTTAACTGTTGTTTATGGGAAACTAGATTCAAAGATTGTGGAGAAAATGTTAATGTCTGTCT CCATACAGATAAAGGAGGGTTTAGAGGTCTGAACATATTGAGTTTCCAACAGTAGAAGCTGGCATATAAAACAAGCTTTT CAATTATTCTTTGTATTATTTTCCTCATTTAACTGTTGTTTTTGGGAAACTAGATTCAAAGATTGTGGAGAAAATGTTAA TGTCTGTCTCCATACAGATAAAGAAGGAGGGTTTAGAGGTTTGAAGTTTCCAACAGTAGAAGCTGGCATATAAAACAAGC TTTTCAATGACCTTGTATGGTGTGAGCTAATTATTTTAGAGCTACGAACTAGCACGGTGCATGCCATCGATAGTCCTACC GTTGGATACAATAACGCCATATACTAATCAGATATTTTTAAGGTAAAATTTAATTGTGATCATTTTTATTTCTCATTCCT ATTTTCTCTGGAATTTATTGCCTCCATATGATTTTGACGTAAATTGCTATCCCTATATTTTGCTGGTTGAGGCTTTATTA TTGTTGATATTGTGACATGCAATTTTCATGGGGATAAGAATTCTCCATGTTGTCTTCAAGAAATATGGGGATAAGAACAC TTCATGGTCGTCTTCAAGAAATAGTCTTCATGGTGGGGGGTGGGGGGCAAAGAAGATCACAGTGGCAGTGGAGGGAGGGT GGGAATGGATCAACACTGCCATTGCTATTTTTCATAAACCACTCACAATTCAAAACTCAATTCTCGCTGGGCGGCCCAAG GGTAGAGCCACCCAAACAAGCCTCCAAAAAAATATTTTTTTACTTAGGCAAAAATGCCTTAAAAAATATTTTTTTACTAA GTAAAAAAGATCTCAAAAAACCAAGCATTATTACTAAGTCAAAAAGGCCAAAAAAATGCTTCACTTTAAAGTTTGTTTTA GGCTTCGTTTAGTGTTGGGCCGGCCCTGAATCCTCTACACCCCCACACATTCTTTGCTCACCCAAAGAACCCTTATTTTC AGACCAAGCATGCATAATCAGAAGATAAACTACCTCTACAAGCACAATCAAACACACAAGTGTAAAACGGCCAGGGGTAG TGGAGGGTGTTTGGGGTGGTTTTGCTTTTTGGTTTTTTGGGGTTTTTGGCCAGGTGGGCTAATTGGGCTTGATAGACTTG GTTTGTTTGATTGTTTTTCTCCCTAGTTGGCGTGTCGTTATCTATCGATTGCTTTTGAATAAAATTCTTCATTTTCAAAA AAAGTTTAAAGTAAAATATATATTATAGTAATAATTTGAGAGATAAATTAAAAATAAAATTTAAAGCTTTTAAATTATTT TAGACAACTTTAAAATATTGAAATTATAATAAAGGATATATTAATTTAAAATAAAAATAATGAGATATGAATTATTTGTG AAAATTTATTTAAAATGGGAATTATTTATGACACCTATTTTCATTGCTCTCACTTTTTCTTTCATTTTCTATTCTTTTTC CTTGAATTGAAATAACATAAAAATCATCTTATTTTTCTTCTATATTCCTTTTTTTAATATTTTTTTCTCTTATAGTTCTT CTCTCAGTTTTACTATTACATCCAAAACAACAAAAACATGGACGGTGAATAAGAAACAGTATATATTCGCTATCTAGTTA GTCAAGATGAATGCCTGTTCAAAATAAAACTCAAAGACCTATGCATGCATTAGCTCATTCATGATATCATTTGATTCAAA TATCAACAATAAGGAAAAACAATATTGTCAATACATATGATGCCTATTGATTGTTCCAAGAGATAAGAAAAATAATATTT ATGACACCTAGTGACATAAGAAATAAAAGAGAGGAATGAGATATATATCATATATGTGATGAGTGCTATGATAAGAAAAT AAGAAAGTGATATGAAGATAGAACCATAAATATTGCTATCTTAAATGCAAAATACTGCAATCTTCCCCGGTGGAGGATTT CAGGATTTGTATTTTGTTTGTGATAGCTGTGGAGGCTCTTTTTGCTCAGTTTCATAGTACACCCTCCGGTCATTATTATA AGCAAAAAACAAGTTTTTAAATTCATTCAATAAATGATGTATGTAGTTTATAATAATGACTAGATACATCATTTATTCAA TGAATCTAAAATTTTTTTTTGCTTATAATAGTGATCGGAGGGTGTATCGTGCAAAATACAAAGTATAGTTAATATTCAAA TTCTGTAAATCAGCATGAGGCACATGAGATATTTACAAATAGTGAATAAAACAATTCTTTCTTTCTGAAAATCTTCAAAA GTCAGAATCTAAAATACCTATTTTTTTATTGAATATTTTGAATTTATATACTTTCTATTATTTACATGTATTTATAAATA GGTACCCGCGCCTTATACAATGAAGATAATATTTACAAAAACGACACTTAGATCTGAATAATTAAGTACGCAATAACATG ACATTAAACAACGCTATCTAGTTAATCCGGATGAAGGCCTGTTCAAATCTATTAGCTCATTCATGATCTCATTTGATATA AAATTATCAATAAAAAAAACACGTAATGTATATGTTGCCTATTGATTGTTACTGTCCCCTTTATCTTCCATCTTAATTCA ACTTACTTTTTCTTCCTAATTCTCTCTACATTTTTATCACCTCACGTATCATATGTGGAGACATTATGTATGCCTATATA AAGAACTCTAAAACCAACAAAGTTGCACATCTCAGAAACAATAACCATAACACTTGTTACAATGAGTTCCAACAATTCCA AACAAACCTATCAACTTCCCACAGAGGTGGTAGCAAAGCCCGATGATGCTTACCTCTCTGCTTTGTCACTGTGTTTTAGT AGAATCTTCCCTGCAATCTTAAATGCTGCTATTGATCTCAATTTGTTTGAGATCATAGCGGAGGCGCAGAGTACTTCATG CGGAGCAAGCTTGTCTGCCTCTGAGATTGCTTCTCTGCTTCCAAATCAACACTCTGAATTGGCAAACAGGCTTGACCGCA TTTTACCTGTGCTGGCCAGTTATTCTCTTCTTACTTGCTCCATTCGCACCGATGAAGAGGGTAAGAGAGAAAGAGTTTAT GCTCTCTCACCCGTTGGTGATTACTTTGTTTGTGATAGCAGAGGAGGCTTTTTAGTTCACTATCAATTATAATTCATCGA GGATTTCAAGATGTTTGGTAAGTAATTAAGCATTTATTAGTTAAAATATAACTTTTTTTTTACATCAGAAAGATAAATTG TATCATCCAGAGGTTGATTTCTAAATCTCCCACACTCAACTTATATGTTCTCTAACTCCTATCACTTATTTGAGCTATCA TTCGAGGACGTTAAAATACAACTTTTATAAATTCATATTATTTTATTTTATTTTTCATCTTATTTTCACTCATATTTTTT CTAATTTTTCCTATCTTTTATTTTTCTCTGTTACTTTCCTATCTCTCCTACGGGTGGAGATGGAATGAGTGTTAACAAAT CACTTTACAATTTTTATTATCATGAAACCCATTTGTTTATTTATCAGGAATGATATAAAGGATGCAATTGTGGATCCTAG TGACAACAATCATTTCCAAAAAGTCTATGGAATGTCAACTTATCAATATATGGAGACAAATGAAGAGCTTAACAACATTT TCATCAAAGCAATAGCCCAAATCAGCTCATTGGAAATGACAAGGATACTTAAACTTTATCAAGGTTTCAAAGGAGTATCA ACAGTTGTTGATGTAGCAGGTGGTGTTGGGCAGGTCTTAAAACAGATCATCTCTGAGCATCCTTCTATAAAAGGAATTAA TTTAGATTTGCCACAAGTGATTCAACACGCCCAACCTCATCCAGGTAACATATACCGATTTCTCATATAGCCTAGCTACC ATATTTTAAAAGAATGCAATTATTTACCCAAAGAAATTAAGAAAAGAAAATCGGAATGAGTTCATTTTATTAATTTGTTA ATTAGAAATTAACACTTATTTTACTTGAAAGGGATAAAACATGTTGGAGGAGATATGTTTGAAAGTGTTCCAGAAGGGGA CGCCATTTTATTGAAGGTTAGTGAGCATATGATACTGGAGAGACCATGTTTATGGGTTTGTCTAAATCACTTTAAGTAAA TATAGGGTAAAATCACCCTAACTTATTGGTCCATGTAATATTTTAATGTGTCTTAAAAAATTCCAGCTCATGAGTCAAAA TATTCGTGAGTTGAACCACCTAAAGCTAGGGTGATTTTATCCATATTTAGTAGGGGTGATTTAGATAACCTCATCTTTAT TTAATTTTAAACATTTTCATATGAAAGAACTCTAAGGTAGAACATGCTAAAATTAAATTGTTATACCGATAAAAACATGT TTTTTTCAATAAAATATGTTTTGATAATATTTAGTATACTCCTCCGTATGCATCAAAATCAATTGGGAATGAAACTTTTT TAATTTGTAAGTTAAATTTTTCTTAATCTATGGAAAAATCCTCTATATGACATAAAAAAAAGTATTGTAATCACTTGGTT TTGTTCTTATTTGGTCTTTTGCCCTCTTCATTTCAGCAAGTATGTCACAATTGGTCAGATGAAGAATGCATAAAGTTGTT AAGAAATTGCCACAAAGCTTTGCCAGAAGAAGGAAAGGTGATTATTATAGAATATATAATTCCAGAAGTCCCAGATTCAA GCTTAATATCCAAGAATACATGTATTGCCGACAATTTCATGTTTGCAGTAACTAGTGGAAAGGAAAGAACCGAGAAGGAA TTCGTCAAATTATGCACGAATTCTGGATTTTCCAGATTTCATGTTGCTTGCCGTGATTTGTCGGTTACGTCAAGAGTTAT GGAGTTTTATAAATAGAAAATAAGTCCTCAGTATTTGGAATCTGAATATGTTGCTAGATGAGTTGAAAAATACTCTAGAC GACAAAATAAAGTAGCAAAGCATAAAGAGACAGTGTCTAGTCTATGTATGAAGTATCTGTTTTTATTTAATTTGTTTCAC ATATTTTCCTTTATTTTAGGCTTAATACATCAGAAGGCCCCTGTAATTGTAAAGGGAATCAAATCCAGGGCCTAGAAAAT TTTTGCATCAAATTGGGTCCCTAGAAAATT
CDS sequence (LotjaGi2g1v0019900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTTTTCAATTCCAATTCCTTGAAGCTATTGAGCCGAGTCAGTTTCCACAAACTCCACTCGCACACAGCATTTCCAAG GAACTCAAATCACAACGCCGTCGACGACGTCGCCGCCGCAATCTGCGACTCCTTCAGAAGACGACGGAGCTGGGACGCCG TCAGCCGCAAGTTTGGCTCCCTCGAGTTAAACGATTCGTTAGTAGAGCAGGTCCTCTTGGAGCTCAAAGACCCAAACGAC GCCAAAACCGCTCTCAGCTTCTTCCACTGGTCCGCCAAAACGCACCGTTTCAACCACGGCGTTCGCTCTTACAGCATCGC CATCCACGTTCTAGTCAGAGCCGGTTTAATCACCGACGCTCGCGCATTGCTCGAATCACTCGCGGCCAAGAACCGCGATC CCGGTGCGGTTCGTGCGGTTACCGACTCGCTGATCGACGCGGTTGGTTTTGTCTCCGGTTCGCACCGTCCGGTGCTTGAC CTCTTGGTCCAGACCTACGCGAAGATGAGGCTCACGGAGGCTGCGTTCGACGTTTGCTGTAACGTCGAAGCGCGAGGGTT TCGCGTGAGCCTCGCGAGTTTTAATTCTGTGTTACACGTTCTTCAGAGATCTGATAGGGTGTCGTTGGTTTGGGATGTTT ACGAGCACATGATTCGTGGAAGGAATTACCCTAATGCGGTTACTTTGAAAATCATGATTGATGCTCTTTGCAAGGAGGGG CTTCTGCAGCGGAACGTGGACGCTTTGGATCGAATCATGGGGGAAAGGAAAAGGAGTTCGCATTCGCCTTCTGCGATTGT CAATTCGAGCTTGATATTGAGAATGGTAGAGAAAGGGCACTTGGTGGAAGAGGAGGGAAAGCGCGAGCGTGTGGCGGTCA TGGTGGTTACATTGTTGAAGAGGCTGTTACAACAGAATTTGGTTCCTGATTCGGTTGGTTACTCTTTGATTGTTCATGCC AAGGTTAGGCTGGGGAGTTTGGATTCTGCATTGGAGATGTATGAGGAAATGGTGATGAGTGGTTTTGAGCCTAATTCTTT TGTCTACACATCGTTCACAGGAGGGTTTTGCAAGGAGGGACGGATTGATGAAGCCATGGAACTAATGCGGGGAATGGAAG GAAGGGGATTGAAGCCTTACGGTGAGACGTTCGATCATGTTATCATTGGTTGCGCGGCGGGTTCTGGAAGGTTGGAGGAG TGTTTGGGTGTTTTTGAGGCAATGTTGGGTGCTGGGTTTATTCCTAGTTGTTTGTCATTTGATAAGATGGTAGAGAAGCT CTGTGAGAACCGGGATGTGGAGCAGGCAAATGCGAATTTGACAAGGTTGTTAGACAAAGGGTTCTTGCCTGGTGAGACTA CTTACTCTCTTTTGATCAAGGGCTATGCCGCAAAGGGTGAGGTTCAGGAGGTTCTCAAGCTGTATTATGAAATGGAGTAC AAGTCCATGTGCCCTGGATTGTCGGTTTTCACCTCGGTAATTCAGTGTTTGTGCCGTTGTGGAAAGCTTGAAGATGCAGA AAAGTATCTAAAGACGATGAAAAGTCGTTTGCTAACACCAGATGTGGCTATATACGAGACAATGATTGCCAGTCATGAGC AGAAAGGCAACAATGCCAGGGTTCTTCAGCTTTGCAATGAAATGGCTTCTTTGGAGTTGTAA
Protein sequence (LotjaGi2g1v0019900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVFNSNSLKLLSRVSFHKLHSHTAFPRNSNHNAVDDVAAAICDSFRRRRSWDAVSRKFGSLELNDSLVEQVLLELKDPND AKTALSFFHWSAKTHRFNHGVRSYSIAIHVLVRAGLITDARALLESLAAKNRDPGAVRAVTDSLIDAVGFVSGSHRPVLD LLVQTYAKMRLTEAAFDVCCNVEARGFRVSLASFNSVLHVLQRSDRVSLVWDVYEHMIRGRNYPNAVTLKIMIDALCKEG LLQRNVDALDRIMGERKRSSHSPSAIVNSSLILRMVEKGHLVEEEGKRERVAVMVVTLLKRLLQQNLVPDSVGYSLIVHA KVRLGSLDSALEMYEEMVMSGFEPNSFVYTSFTGGFCKEGRIDEAMELMRGMEGRGLKPYGETFDHVIIGCAAGSGRLEE CLGVFEAMLGAGFIPSCLSFDKMVEKLCENRDVEQANANLTRLLDKGFLPGETTYSLLIKGYAAKGEVQEVLKLYYEMEY KSMCPGLSVFTSVIQCLCRCGKLEDAEKYLKTMKSRLLTPDVAIYETMIASHEQKGNNARVLQLCNEMASLEL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 36 | 149 | 114 | 1.0E-7 | ||
| PANTHER | 66 | 437 | 372 | 4.0E-61 | – | |
| ProSiteProfiles | 100 | 134 | 35 | 7.848 | ||
| Gene3D | 155 | 294 | 140 | 1.6E-14 | ||
| ProSiteProfiles | 155 | 189 | 35 | 5.744 | ||
| ProSiteProfiles | 190 | 224 | 35 | 8.024 | ||
| Pfam | 192 | 238 | 47 | 3.0E-8 | ||
| ProSiteProfiles | 225 | 259 | 35 | 7.114 | ||
| Gene3D | 295 | 428 | 134 | 8.9E-22 | ||
| ProSiteProfiles | 310 | 344 | 35 | 11.137 | ||
| TIGRFAM | 314 | 346 | 33 | 1.6E-4 | ||
| Pfam | 341 | 373 | 33 | 4.0E-9 | ||
| ProSiteProfiles | 345 | 379 | 35 | 12.485 | ||
| TIGRFAM | 348 | 379 | 32 | 4.7E-6 | ||
| ProSiteProfiles | 380 | 415 | 36 | 8.309 | ||
| Pfam | 388 | 413 | 26 | 0.48 | ||
| ProSiteProfiles | 416 | 450 | 35 | 7.826 | ||
| PANTHER | 446 | 550 | 105 | 4.0E-61 | – | |
| Pfam | 451 | 499 | 49 | 3.8E-7 | ||
| ProSiteProfiles | 451 | 485 | 35 | 10.457 | ||
| TIGRFAM | 454 | 479 | 26 | 1.8E-4 | ||
| Gene3D | 479 | 552 | 74 | 2.0E-13 | ||
| ProSiteProfiles | 486 | 520 | 35 | 10.424 | ||
| TIGRFAM | 489 | 521 | 33 | 7.5E-6 | ||
| ProSiteProfiles | 521 | 553 | 33 | 6.928 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi2g1v0019900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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