Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0055900 |
| Transcript ID | LotjaGi2g1v0055900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cytochrome B561, putative; TAIR: AT5G38630.1 cytochrome B561-1; Swiss-Prot: sp|Q9SWS1|ACFR2_ARATH Probable transmembrane ascorbate ferrireductase 2; TrEMBL-Plants: tr|A0A0R4J5Z6|A0A0R4J5Z6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0055900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:11332577..11338411) extracted from Lotus japonicus Gifu genome v1.2.
GAAGGTTCTAGTTCTAGTCTGTGATTGAAACTCAAAATGGGAAGAAAAGCAGTTCTAAACCTAGTGCTTATTTAATTTAA TCATCTGGTACTGCTTTGACATTTCCTTTCCCTTTGAAACCTCTTTTTCTCTCTCTACCATTTTCTCTCTCTAGAATGGC GGCTCCGCCGGTGGTGAGGTTCCCGATCATGGCGACGGTGAGGGCGGTTGGGGTAGCCATCAGTGTTCTTCTCCTCACTT GGGCTCTCCATTTCAGAGGAGGCCTCGCTCTTTTTTCCGACAACAAAGATCTCATCTTCAATGTAAACAAACAAACAAAC ACCCATTTCTCAATTTTAGTTTTTTCAGCTTTGTTTAGCTTTTTATTTATATATTTTTAGCTCCAAATTTGTGTACTTTT TCAAGGATGTTTGTAATTTGTGCATTTTCAGCATTATTATGTGAACAAATGCATTTGAATTGAACTTTTTGTGTGTTTTT TCTATGCAGGTTCATCCTGTGTTGATGGTGATCGGGCTTGTTTTAATCAATGGTGAAGGTAAGAGTTCTTTCTTTTTACT ATTCATTATTTGATATTTCACTGAGAAGGCTTTGTTAGATCTCAATAGCTGTTTGTTTGTTTTTTAGGGGTTTGGATGAG TGTAGTGATCTGATTGAGATTATCCTGTCTTTATGTAATGCTGCTAATAAATATGAGAAATCTCTTTAAGCATTTGACTT ATAGTGTTCATAATTGTTTGATTCACGAAATTTTATGGAAATGTCAGTGGTCTTTTCTCGTTTGTTTGCCCTTCCTTTTA TAGGTGAAGCATTTAGTTATTTTGGCTCGTTAAGCTTTTTCGTTTTGTTAACAAGCTATATAAAAAAAAAATCGGTTCTA TAAAGGGAATAATATATTAACTTATTAAGTTTGAATAAGATTTCTCATACTTGTTTTATCTCCATTTGTGAATCCTGTCC TTCATAAAATACTACTAAAGCGCCTACTTTTAAAGCAAAAGTGCTAAACTAGGAAAAGTAGATCAATACGAATTTATCTT CATTATGGTCCTATGAATATGATATTTTTGATTTAGATTACGCAGCGTGTCTTGTATGTTAATCCCAATCCCTATCAGAT GCTTGTGGTAATGAGTGGTGTATTCAACATGTCATCCCCCACTTTGTGTCTATAAAACATTTTTCATCGTCATGACTCCT GAACACGGAAAAAGGGACAAGTACAATTTTCCGGTTGTTTATCTTGAGAACCTTTTGTATCGGAAGCCCTAGGGCTGGTA TAGCCTCCTTTAGTCCAAAAAGAAATGGCAGAGGCCAAATTTAAATGAAAGATTTGGTCCTTCTTTTGGTTAAATTGTAA GAGACTTCAAAGATCAAAGCTAGCTGGTATCTTGATGCTGATAACAGTTTTTATGAAAATAGGACTTCACAAGTCAAATG AATATATTGTCTTAGATTCCATACAATGCTTGTTCTGATTATCTGATAGAAACCTTTAATTAAAATGGTCTATGATAGGA AAAGGCTATTGGGCTTGGGGCTGATAAGGCCCATGTACATTAGATAGTTGGGTTTAGGGTTAGTTTGAGCTATGTTGTGA ATCCAAGTTCCCAGCTCGTCGCGGCCAGCCTCAAAACTCGGATAGCGGGATGGCTGGGATAGTGATTTTTTGTCTATATT TTGTATAATTTATACCATATGTACACATACTAAATAAATGATAAATGTAAGATATTCCTATTGAGGTGGTTGCAGGCCGG TTCTAGGTCCAAGAGAGGGAAAGTGTGAAGATAGAACAGAGGAGAAGAGGGTCGAAGTCAGTAGAAGAGAGGGAGAAATC GGAAAAAAAAAAATTCTAGGGTTTTTTCCATTGCGAAATCCCGGAAATACCTGTTGAATATCTGTTAAGATTTAGTTTAT TATTAGTGCTATCTCATAGAGATATAGTTAAGATTTGTTTATCTATTTTAGATTAGTATCTATTTAAATAGAGATAATAT CTATTTAAATAGATATAGGTTGAGATAGATTTAGTTTGTTTTAATCTCTTTGTTAGTCTATATATATATTGTAGTCTAGT CAAGTATTATGAATGAAATACAAGTATTATTTTATCAAATTCAAGTTGGTATCAGAGCAAGTTTCGATCCTACCGCTGTG AGGGGGCTCCTCCCCCGTGAGCCCCCTCATGGCTACTTTCCAAATCTCTTTGGATATATTTTTCTACCCATAAATAAAAA CCGCCAATTAACATATGGGGTGCATTTGTGGAAGCTTTGTTAGCTATGCATAGTATAGGGAGAGAATGAGGGGAGATCTT TGCTTTATTCATGATGAGAAATTCTCACCTGAGCAAGTTTGCAGTAAAGCATCTCAGGGTAATGATATTGGGAAAGAAGG CATGGAAGCTGTTGTGGGGGCTGACAATTACGAGGAGATGGAACAGTGGGAAGGGAAGACTGCAAATCAGACCTGCAAAG TATGTCACGGCTCACTTCTAAAACGTCCCTTAAACTATAGGTGACAATTGACAATAAGGCATTTGTATTTACAGACAGTG TGACCCACAATTTTATCCTCCAACAGCTAGTGAATAACCTTGGGCTGCAAGCTAAGGAGACTCCCTCCTTCAGGGCCTGA GATGGTACAGGAAAGTCTTTTTGATTGATTATTGTAGATCAGAAGCTCAACACTTTGAAGGGAGAAGTTCTCAGCACCAG TTGGAGGTGTTACAGTAGTCTAATGAGGTGTTTCAGGAACCACGTGATCACCTCCAACTAGGAGGCATGATCATGCAATC ACAGTGAAGGAGAGGGCATCCATCCCTAATCTAAGGCCTTGTCAATATCCACAATATTGATCAAAAGGGAGAAATTGAGA AGTTGGTGGGAGAAATGCTTAAAGCTTGAATTATTAGGCGGCCTAGTGTCAGCCCTTTCTTGATGAGAAAAAAAATGGTA GTTGGAGAGTGTCTTGACTATAGACTTCAGAGCATTAAACAAAATCACTGTCCTCGATAATTTCCCATACCCGTTACTGA TGAGCTGCTGGATGACTTCAGCAGGAGCCATTATTTTCTCTAAGCTGGACTTGAAGTCAGGTTATCGTCAAATCAGAATG TAGGGGGATATAAAGACAACAACATCCCAGGCTTATGAGGGGCATAATGAGTTTCTAGTGGTGTCTTTTAGGCTCACTAA GGCACCTTCCACTTTTCTGTCCTGTATGAATGAGGTATTAAAACCATTTCTAAGAAATTTTGTATCAGTGATTTTTATGA TATTTTAATATATTCCAGATGAGAGGGAACAACGACGGAATTTGAAAGAAGTTTTTCAGCTACTGAGAAGTGAGATATCA TAAGTTAGTGGTTAACACAAGTTGAGTATTTAGGTCATGTTATTTTACTTGAAGGGGCAGCAATTGATCTTAAAAAGCAG AGGCAGTGCAACTACCTAATGTACTGGAGACATACTTAAGGTGCTGTTCAGGGTCCAATTCGAGGCAGTGGCCTTCTTGG CTAGCGTGGGTTGGTTTAACCCCTATGTTAATTGTTCAACACAGATGGCACCATTCTAGGCTCTATATGGGCTTAACCCC CTCTTATTTTCAAGGGAGAAACCTTCCCTTCTAAGGTGGAAGAAGCCAATCTGTTGACCAGGGCTAGGGATGACAAGTTG CAGCTACTAAAACTAAGTTGTGATCTTTGGCCTGAACGGAAACTGAAAAGTCAGCCCCACGTTTCTGTGGTCCTTACTAT ATCACAGGATATGGTCAGTTGCATACCCCCTTGCAATTACCGGATCATAGCAGAATCCATCCTTTTTTTATGTACGTTTA CTAAATTACTAAAGATCATTTCTAGTCCAATCAATCACGAGCCATTTCCGTCCTGGATTGTGAAAATTCATGGGACTCAC CAGCTCTATGCAGTCCAGTTTCCCTCATTTGCACCTTCAAAAGGTGAATGCTTTTTTTCGGGGGGGGGGGGGGGGATATT GATAGCGGACCTTCAATTAATAAGGCCTATGTTTAAGGCTAATTGGCCTGGGGATGATGATGCCCAAGTACATTAGATAC TTAGTTGGGTTTAGGGTTAGTTAGAGAGATTTGTTATTAATGTGGTGAGTTAGTTAAGGGGTGATTACAAGTTGTATTGG TTCTATATAAAGCCTAAGGGTAGATAACAGGGGCTGATAGGAATGCTAGTCTTTGAGAAGGAGGTACCATAATATTCAAT TATCTGGCTCTTGTAGTTCCAGTTCTGTCTACATTGGGCAGCACTGACTTTCTTGCTTGATTTTCAATAAAATATTCAAT CTTTATTCATAAGTCTGAACTGGTTGTGTCACTATCCCTCCATTATTTTTTAGTTCTGCAGTTTTAGTGCTAACTTCTTA TATCTGTTTGTTATGTCAATGTGAAGGGATGCTTGCATATAAGACAATATCTGGAACTAAAAACTTCAAAAAAGCCGTTC ATCTGGCATTTCAGCTTGTCTCCCTCATTTTGAGCTTAGTTGGTGTCTGGGCTGCTTGGAAGTTTCACATTGACAAGGGC ATCGACAATTTCTACAGCCTGCATTCATGGTTGGGCCTTGCATGCCTTTTCCTATTCTCCATCCAGGTATCTTTGTTATT CTATTTTCATCTTATAACTTGGGGAATTACTATTTTTACCACCCATTTTTTTTTTCCTCCATACACCGCCCTACATTTTT ATTTCATAAAATACCTTTTTTTTGGTACATGGGAAAATTCTTTCATAAAATACCTTTAAAAAGAAAGTGACGGGATATAT TATCTCCGGAAATTAGAAAAATATATCTTTCAGAAATCAATTTCCGTAAAGTTAAAATTACATTCCGGGAATTAATTTCC GGAAAGATGTTTATGACTTTATCGAAATTAATCTCCGAAAGATATATTTACTATATTGGAAATAATTTTCTGGAGTTGGA AAAAACCTTCTAGAAATTAATTTCCGGAAGATATGTTCAATATATTTGAAATAATTTTTCGGAATTGGAAAAGTACATTT AAACTGTTTTGGAATGTGTGCTGGCATAGAAATACAATCATTATCTCCCTTCTCTCCATTTCGCTAATCTCAGGTGTAAT ATAATTATTTCACGCATAAGTGGGTAGTGCAAGGAGAAAACTCTTGGTGCAGATAGTATTTTCCTATAATATTTTCTATT CCACCTCAGAATTTTGATTCCATATGTATGCATCTGACTGCTTGTTATAATGTTTGGCAGTGGGCTGCTGGCTTTGCTAC ATTTTGGTATCCAGGAGGGTCAAGAAATAGTAGAGCTGCCTTGTTGCCATGGCATGCGTTCTTTGGGATCTATATCTATG CCTTGGCTATAGCCACAGCTACTACTGGTATTTTAGAGAAGCTTACATTCCTTCAGGTGAACAAGATCATATCACGCTAT TCCAATGAAGCAATGTTGGTCAATTCCTTGGGTATTTTAATCGTTATTTTAGGTGGCCTTGTTATTCTTAGACTCGTTAC GCCAGCTCATGTTAGTAAAGCTGATATCTTCAGAGGAAACTAAGCAACTGTATGATTCAAATTCGAGGAACATGAACATT TGTATCATCTTCCATCACAGGTTTAATTGTATGAGCGAACTAGTTATACAAAAATACAGGTTTAATTTCATCTCAAACCT TTTACCTGCACGTGCCTTTGGGGACCTAAGCGCCCTACTATTGGTCGGCAGACAAACTGCAGACACACGCATCGCTTTAG CTCGGATTCTGACTTAGCGCTAAGTCATAATCTAACACACAGAAGCTTAGCGACACTGGCTTTTTAACAAAGCGC
CDS sequence (LotjaGi2g1v0055900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGGCTCCGCCGGTGGTGAGGTTCCCGATCATGGCGACGGTGAGGGCGGTTGGGGTAGCCATCAGTGTTCTTCTCCT CACTTGGGCTCTCCATTTCAGAGGAGGCCTCGCTCTTTTTTCCGACAACAAAGATCTCATCTTCAATGTTCATCCTGTGT TGATGGTGATCGGGCTTGTTTTAATCAATGGTGAAGGGATGCTTGCATATAAGACAATATCTGGAACTAAAAACTTCAAA AAAGCCGTTCATCTGGCATTTCAGCTTGTCTCCCTCATTTTGAGCTTAGTTGGTGTCTGGGCTGCTTGGAAGTTTCACAT TGACAAGGGCATCGACAATTTCTACAGCCTGCATTCATGGTTGGGCCTTGCATGCCTTTTCCTATTCTCCATCCAGTGGG CTGCTGGCTTTGCTACATTTTGGTATCCAGGAGGGTCAAGAAATAGTAGAGCTGCCTTGTTGCCATGGCATGCGTTCTTT GGGATCTATATCTATGCCTTGGCTATAGCCACAGCTACTACTGGTATTTTAGAGAAGCTTACATTCCTTCAGGTGAACAA GATCATATCACGCTATTCCAATGAAGCAATGTTGGTCAATTCCTTGGGTATTTTAATCGTTATTTTAGGTGGCCTTGTTA TTCTTAGACTCGTTACGCCAGCTCATGTTAGTAAAGCTGATATCTTCAGAGGAAACTAA
Protein sequence (LotjaGi2g1v0055900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAAPPVVRFPIMATVRAVGVAISVLLLTWALHFRGGLALFSDNKDLIFNVHPVLMVIGLVLINGEGMLAYKTISGTKNFK KAVHLAFQLVSLILSLVGVWAAWKFHIDKGIDNFYSLHSWLGLACLFLFSIQWAAGFATFWYPGGSRNSRAALLPWHAFF GIYIYALAIATATTGILEKLTFLQVNKIISRYSNEAMLVNSLGILIVILGGLVILRLVTPAHVSKADIFRGN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 229 | 229 | 5.1E-88 | – | |
| Phobius | 1 | 11 | 11 | - | – | |
| PANTHER | 4 | 231 | 228 | 7.5E-122 | – | |
| PANTHER | 4 | 231 | 228 | 7.5E-122 | ||
| Phobius | 12 | 31 | 20 | - | – | |
| TMHMM | 13 | 32 | 20 | - | – | |
| ProSiteProfiles | 14 | 218 | 205 | 44.614 | ||
| Phobius | 32 | 50 | 19 | - | – | |
| CDD | 41 | 184 | 144 | 3.61519E-73 | – | |
| TMHMM | 47 | 69 | 23 | - | – | |
| SMART | 50 | 176 | 127 | 5.7E-50 | ||
| Pfam | 50 | 182 | 133 | 9.4E-45 | ||
| Phobius | 51 | 70 | 20 | - | – | |
| Phobius | 71 | 81 | 11 | - | – | |
| TMHMM | 82 | 104 | 23 | - | – | |
| Phobius | 82 | 103 | 22 | - | – | |
| Phobius | 104 | 114 | 11 | - | – | |
| Phobius | 115 | 142 | 28 | - | – | |
| TMHMM | 119 | 141 | 23 | - | – | |
| Phobius | 143 | 153 | 11 | - | – | |
| TMHMM | 154 | 176 | 23 | - | – | |
| Phobius | 154 | 177 | 24 | - | – | |
| Phobius | 178 | 196 | 19 | - | – | |
| TMHMM | 196 | 218 | 23 | - | – | |
| Phobius | 197 | 218 | 22 | - | – | |
| Phobius | 219 | 232 | 14 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. |
Expression pattern of LotjaGi2g1v0055900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…